RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 PDCD11Q14690 1871 aaKnown RBP2.35□□□□□ -2.03
FXN-204ENST00000484259 RANBP2P49792 3224 aaKnown RBP2.35□□□□□ -2.03
FXN-204ENST00000484259 COL4A4P53420 1690 aaPredicted RBP2.35□□□□□ -2.03
FXN-204ENST00000484259 A0A0B4J2C4 111 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 C16orf90A8MZG2 172 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 LOC730098B7Z3J9 87 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 HCG22E2RYF7 251 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 H3BPC8 53 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 LINC01565O15544 149 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 CLPSP04118 112 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 IL4P05112 153 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 HMGN2P05204 90 aaKnown RBP2.35□□□□□ -2.03
FXN-204ENST00000484259 COX6CP09669 75 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 P0C879 139 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 IL9P15248 144 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 SPANXN5Q5MJ07 72 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 FAM27BQ5VT28 67 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 DEFB107AQ8IZN7 70 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 TOMM5Q8N4H5 51 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 C16orf74Q96GX8 76 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 U3KQK5 164 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 TCF20Q9UGU0 1960 aaKnown RBP2.35□□□□□ -2.03
FXN-204ENST00000484259 BRCA2P51587 3418 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 MKI67P46013 3256 aaKnown RBP2.35□□□□□ -2.03
FXN-204ENST00000484259 DOCK8Q8NF50 2099 aa2.35□□□□□ -2.03
FXN-204ENST00000484259 EML6Q6ZMW3 1958 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 BDP1A6H8Y1 2624 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 TRBV25-1A0A075B6N4 114 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 A0A087WSZ3 146 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 TRBV6-7A0A0A0MS04 114 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 A0A1B0GWA3 101 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 KRTAP29-1A8MX34 341 aaPredicted RBP2.34□□□□□ -2.03
FXN-204ENST00000484259 H7C2G1 150 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 DNAH10OSP0CZ25 163 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 KRTAP10-7P60409 375 aaPredicted RBP2.34□□□□□ -2.03
FXN-204ENST00000484259 KLF9Q13886 244 aaPredicted RBP2.34□□□□□ -2.03
FXN-204ENST00000484259 C1orf134Q5TEV5 83 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 Q8N6K4 173 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 C1orf64Q8NEQ6 169 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 SPTSSBQ8NFR3 76 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 RPL36ALQ969Q0 106 aaKnown RBP2.34□□□□□ -2.03
FXN-204ENST00000484259 IFI27L1Q96BM0 104 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 FAM215AQ9Y5M1 114 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 ARL2-SNX15V9GYD0 113 aa2.34□□□□□ -2.03
FXN-204ENST00000484259 DNAH12Q6ZR08 3092 aa2.34□□□□□ -2.04
FXN-204ENST00000484259 CCDC88CQ9P219 2028 aa2.34□□□□□ -2.04
FXN-204ENST00000484259 ZDBF2Q9HCK1 2354 aa2.34□□□□□ -2.04
FXN-204ENST00000484259 PCSK5Q92824 1860 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 F5P12259 2224 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 IGKV1D-37A0A075B6S9 117 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 IGKV1OR2-108A0A075B7D4 117 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 IGHV3-64DA0A0J9YX35 117 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 MYMXA0A1B0GTQ4 84 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 LOC285095A0A1B0GVY8 99 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 B4DSR2 109 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 RPL36AP83881 106 aaKnown RBP2.33□□□□□ -2.04
FXN-204ENST00000484259 NNATQ16517 81 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 Q1RN00 199 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 ATP5EP2Q5VTU8 51 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 Q6ZQT0 140 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 ZNF818PQ6ZRF7 136 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 KLHL30-AS1Q8NEE0 82 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 TMEM254Q8TBM7 123 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 LIMD2Q9BT23 127 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 DEFB126Q9BYW3 111 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 TP53TG3Q9ULZ0 132 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 HILPDAQ9Y5L2 63 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 PLXNA3P51805 1871 aa2.33□□□□□ -2.04
FXN-204ENST00000484259 IGLV10-54A0A075B6I4 117 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 TRAV23DV6A0A075B6W5 121 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 CEBPZOSA8MTT3 80 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 C17orf98A8MV24 154 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 E7EUB6 86 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 H3BQ85 93 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 LHBP01229 141 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 BAALC-AS2P0C853 105 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 CFC1BP0CG36 223 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 MGST1P10620 155 aaKnown RBP2.32□□□□□ -2.04
FXN-204ENST00000484259 MIFP14174 115 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 EDDM3BP56851 147 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 PLGLAQ15195 96 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 C15orf32Q32M92 178 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 FAM229BQ4G0N7 80 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 Q6JHZ5 121 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 Q6ZS52 159 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 SMIM29Q86T20 159 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 NDUFA11Q86Y39 141 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 FAM223AQ8IWN6 122 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 C20orf197Q8N268 126 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 Q8N377 158 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 GNG13Q9P2W3 67 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 CACNA1HO95180 2353 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 ANAPC1Q9H1A4 1944 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 LAMA3Q16787 3333 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 TECTAO75443 2155 aa2.32□□□□□ -2.04
FXN-204ENST00000484259 PTPRZ1P23471 2315 aaPredicted RBP2.31□□□□□ -2.04
FXN-204ENST00000484259 PIEZO1Q92508 2521 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 NYNRINQ9P2P1 1898 aaKnown RBP2.31□□□□□ -2.04
FXN-204ENST00000484259 HEATR5AQ86XA9 2040 aa2.31□□□□□ -2.04
FXN-204ENST00000484259 DSCAML1Q8TD84 2053 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms