RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CHCHD1Q96BP2 118 aaKnown RBP7.18□□□□□ -1.26
HDAC6-226ENST00000483656 TP53TG1Q9Y2A0 90 aa7.18□□□□□ -1.26
HDAC6-226ENST00000483656 IGHV3-53P01767 116 aa7.17□□□□□ -1.26
HDAC6-226ENST00000483656 FABP4P15090 132 aa7.17□□□□□ -1.26
HDAC6-226ENST00000483656 POLR2KP53803 58 aaKnown RBP7.17□□□□□ -1.26
HDAC6-226ENST00000483656 SUMO2P61956 95 aaKnown RBP7.17□□□□□ -1.26
HDAC6-226ENST00000483656 FAM222AQ5U5X8 452 aa7.17□□□□□ -1.26
HDAC6-226ENST00000483656 SBSPONQ8IVN8 264 aa7.17□□□□□ -1.26
HDAC6-226ENST00000483656 C20orf78Q9BR46 151 aa7.17□□□□□ -1.26
HDAC6-226ENST00000483656 A0A096LNJ9 63 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 IGHV1-24A0A0C4DH33 117 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 LYRM9A8MSI8 78 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 PPP1R17O96001 155 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 PMCHP20382 165 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 S100A2P29034 98 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 RPL32P62910 135 aaKnown RBP7.16□□□□□ -1.26
HDAC6-226ENST00000483656 PMCHL1Q16048 86 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 FA2HQ7L5A8 372 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 PACRGQ96M98 296 aaPredicted RBP7.16□□□□□ -1.26
HDAC6-226ENST00000483656 C18orf15Q96N68 181 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 SMIM2Q9BVW6 85 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 NIT2Q9NQR4 276 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 DKK2Q9UBU2 259 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 CELA1Q9UNI1 258 aa7.16□□□□□ -1.26
HDAC6-226ENST00000483656 TENM3Q9P273 2699 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 TRGV2A0A075B6R0 118 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 HSBP1O75506 76 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 DEFB130BP0DP73 79 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 DEFB130AP0DP74 79 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 AMTP48728 403 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 FHL2Q14192 279 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 NEGR1Q7Z3B1 354 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 NEXN-AS1Q8NBZ9 246 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 OR10D4PQ8NGN7 298 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 TMEM18Q96B42 140 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 TMEM70Q9BUB7 260 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 ST20Q9HBF5 79 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 NXT2Q9NPJ8 142 aaKnown RBP7.15□□□□□ -1.26
HDAC6-226ENST00000483656 AP5S1Q9NUS5 200 aa7.15□□□□□ -1.26
HDAC6-226ENST00000483656 SDHAF1A6NFY7 115 aa7.14□□□□□ -1.27
HDAC6-226ENST00000483656 H7C1H1 209 aa7.14□□□□□ -1.27
HDAC6-226ENST00000483656 TCAPO15273 167 aa7.14□□□□□ -1.27
HDAC6-226ENST00000483656 DEFB121Q5J5C9 76 aa7.14□□□□□ -1.27
HDAC6-226ENST00000483656 TRBV27A0A0K0K1C4 114 aa7.13□□□□□ -1.27
HDAC6-226ENST00000483656 VCYO14598 125 aa7.13□□□□□ -1.27
HDAC6-226ENST00000483656 CIDEAO60543 219 aa7.13□□□□□ -1.27
HDAC6-226ENST00000483656 AKR1D1P51857 326 aa7.13□□□□□ -1.27
HDAC6-226ENST00000483656 LINC00173Q6ZV60 143 aa7.13□□□□□ -1.27
HDAC6-226ENST00000483656 SLC25A29Q8N8R3 303 aa7.13□□□□□ -1.27
HDAC6-226ENST00000483656 TM2D3Q9BRN9 247 aa7.13□□□□□ -1.27
HDAC6-226ENST00000483656 K7EQD1 137 aa7.12□□□□□ -1.27
HDAC6-226ENST00000483656 SPART-AS1P0CW21 52 aa7.12□□□□□ -1.27
HDAC6-226ENST00000483656 FCER1GP30273 86 aa7.12□□□□□ -1.27
HDAC6-226ENST00000483656 LAGE3Q14657 143 aa7.12□□□□□ -1.27
HDAC6-226ENST00000483656 MRAPQ8TCY5 172 aa7.12□□□□□ -1.27
HDAC6-226ENST00000483656 DEFB104AQ8WTQ1 72 aa7.12□□□□□ -1.27
HDAC6-226ENST00000483656 DNAJC30Q96LL9 226 aa7.12□□□□□ -1.27
HDAC6-226ENST00000483656 TRGV4A0A0C4DH28 118 aa7.11□□□□□ -1.27
HDAC6-226ENST00000483656 TRBV10-1A0A0K0K1A3 114 aa7.11□□□□□ -1.27
HDAC6-226ENST00000483656 LOC100131303A0A0U1RQF7 123 aa7.11□□□□□ -1.27
HDAC6-226ENST00000483656 TRBV6-4A0A1B0GX49 114 aa7.11□□□□□ -1.27
HDAC6-226ENST00000483656 TSHBP01222 138 aa7.11□□□□□ -1.27
HDAC6-226ENST00000483656 C11orf68Q9H3H3 251 aaKnown RBP7.11□□□□□ -1.27
HDAC6-226ENST00000483656 TNFRSF18Q9Y5U5 241 aa7.11□□□□□ -1.27
HDAC6-226ENST00000483656 I3L3M4 83 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 K7EMI3 77 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 HBDP02042 147 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 C3orf79P0CE67 100 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 DAD1P61803 113 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 C12orf74Q32Q52 190 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 PYY3Q5JQD4 70 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 Q8N976 141 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 ZNRF2Q8NHG8 242 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 SPATA25Q9BR10 227 aa7.1□□□□□ -1.27
HDAC6-226ENST00000483656 TRBV7-3A0A075B6L6 115 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 A0A0J9YWU9 116 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 GAGE12JA6NER3 117 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 LEPROTL1O95214 131 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 LINC00694P0DN24 101 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 CRYBA4P53673 196 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 UBE2D3P61077 147 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 UBE2D2P62837 147 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 GAGE1Q13065 139 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 GAGE4Q13068 117 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 GAGE5Q13069 117 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 GAGE13Q4V321 117 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 ORMDL2Q53FV1 153 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 HHLA3Q9XRX5 114 aa7.09□□□□□ -1.27
HDAC6-226ENST00000483656 IGHV3-38A0A0C4DH36 116 aa7.08□□□□□ -1.28
HDAC6-226ENST00000483656 NUDT3O95989 172 aa7.08□□□□□ -1.28
HDAC6-226ENST00000483656 ATP5G1P05496 136 aa7.08□□□□□ -1.28
HDAC6-226ENST00000483656 RPL36AP83881 106 aaKnown RBP7.08□□□□□ -1.28
HDAC6-226ENST00000483656 JOSD1Q15040 202 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-226ENST00000483656 RHOHQ15669 191 aa7.08□□□□□ -1.28
HDAC6-226ENST00000483656 PHLDA1Q8WV24 401 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-226ENST00000483656 RPL36ALQ969Q0 106 aaKnown RBP7.08□□□□□ -1.28
HDAC6-226ENST00000483656 VSIG2Q96IQ7 327 aa7.08□□□□□ -1.28
HDAC6-226ENST00000483656 KIR2DL4Q99706 377 aa7.08□□□□□ -1.28
HDAC6-226ENST00000483656 TEX48A0A1B0GUV7 120 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms