RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 P0DMU3 169 aa10.66□□□□□ -0.7
CCM2-215ENST00000482714 FAM231AP0DMU4 169 aa10.66□□□□□ -0.7
CCM2-215ENST00000482714 FAM231CP0DMU5 169 aa10.66□□□□□ -0.7
CCM2-215ENST00000482714 TIRAPP58753 221 aa10.66□□□□□ -0.7
CCM2-215ENST00000482714 ELOBQ15370 118 aa10.66□□□□□ -0.7
CCM2-215ENST00000482714 ATRAIDQ6UW56 229 aa10.66□□□□□ -0.7
CCM2-215ENST00000482714 CCL18P55774 89 aa10.65□□□□□ -0.7
CCM2-215ENST00000482714 AMN1Q8IY45 258 aa10.65□□□□□ -0.7
CCM2-215ENST00000482714 ZNRF2Q8NHG8 242 aa10.65□□□□□ -0.7
CCM2-215ENST00000482714 GNB1LQ9BYB4 327 aa10.65□□□□□ -0.7
CCM2-215ENST00000482714 TNFRSF18Q9Y5U5 241 aa10.65□□□□□ -0.7
CCM2-215ENST00000482714 LGALS9CQ6DKI2 356 aa10.64□□□□□ -0.71
CCM2-215ENST00000482714 NEXN-AS1Q8NBZ9 246 aa10.64□□□□□ -0.71
CCM2-215ENST00000482714 ATP6V0E2Q8NHE4 81 aa10.64□□□□□ -0.71
CCM2-215ENST00000482714 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
CCM2-215ENST00000482714 MT-ND6P03923 174 aa10.63□□□□□ -0.71
CCM2-215ENST00000482714 LINC00694P0DN24 101 aa10.63□□□□□ -0.71
CCM2-215ENST00000482714 UBE2D3P61077 147 aa10.63□□□□□ -0.71
CCM2-215ENST00000482714 UBE2D2P62837 147 aa10.63□□□□□ -0.71
CCM2-215ENST00000482714 DAZ4Q86SG3 579 aaKnown RBP10.63□□□□□ -0.71
CCM2-215ENST00000482714 DAZ3Q9NR90 486 aaKnown RBP10.63□□□□□ -0.71
CCM2-215ENST00000482714 LOC100131303A0A0U1RQF7 123 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 GAGE12JA6NER3 117 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 HLA-DQA1P01909 254 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 CKS2P33552 79 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 GAGE1Q13065 139 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 GAGE4Q13068 117 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 GAGE5Q13069 117 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
CCM2-215ENST00000482714 GAGE13Q4V321 117 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 TMEM97Q5BJF2 176 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 LYPD5Q6UWN5 251 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 GTSF1LQ9H1H1 148 aa10.62□□□□□ -0.71
CCM2-215ENST00000482714 PHOX2AO14813 284 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 ESRGQ1W209 222 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 TMEM136Q6ZRR5 245 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 Q9UF83 564 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 LAMTOR2Q9Y2Q5 125 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 SACSQ9NZJ4 4579 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 ORMDL3Q8N138 153 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 YPEL4Q96NS1 127 aa10.61□□□□□ -0.71
CCM2-215ENST00000482714 TENM2Q9NT68 2774 aa10.6□□□□□ -0.71
CCM2-215ENST00000482714 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
CCM2-215ENST00000482714 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
CCM2-215ENST00000482714 TGIF2-C20orf24A0A0A6YYL0 155 aa10.59□□□□□ -0.71
CCM2-215ENST00000482714 OR10J3Q5JRS4 329 aa10.59□□□□□ -0.71
CCM2-215ENST00000482714 UPK3BQ9BT76 320 aa10.59□□□□□ -0.71
CCM2-215ENST00000482714 ST20Q9HBF5 79 aa10.59□□□□□ -0.71
CCM2-215ENST00000482714 ATP6V1G1O75348 118 aa10.58□□□□□ -0.72
CCM2-215ENST00000482714 APCSP02743 223 aa10.58□□□□□ -0.72
CCM2-215ENST00000482714 LELP1Q5T871 98 aa10.58□□□□□ -0.72
CCM2-215ENST00000482714 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
CCM2-215ENST00000482714 PRSS47A8MTI9 375 aa10.57□□□□□ -0.72
CCM2-215ENST00000482714 D6R8Y8 96 aa10.57□□□□□ -0.72
CCM2-215ENST00000482714 VCYO14598 125 aa10.57□□□□□ -0.72
CCM2-215ENST00000482714 POLR2KP53803 58 aaKnown RBP10.57□□□□□ -0.72
CCM2-215ENST00000482714 RPL32P62910 135 aaKnown RBP10.57□□□□□ -0.72
CCM2-215ENST00000482714 UBE2DNLQ8IWF7 75 aa10.57□□□□□ -0.72
CCM2-215ENST00000482714 NRACQ8N912 160 aa10.57□□□□□ -0.72
CCM2-215ENST00000482714 LINC00588Q9Y4M8 146 aa10.57□□□□□ -0.72
CCM2-215ENST00000482714 VPS13DQ5THJ4 4388 aa10.57□□□□□ -0.72
CCM2-215ENST00000482714 TRBV27A0A0K0K1C4 114 aa10.56□□□□□ -0.72
CCM2-215ENST00000482714 SDHAF1A6NFY7 115 aa10.56□□□□□ -0.72
CCM2-215ENST00000482714 SUMO2P61956 95 aaKnown RBP10.56□□□□□ -0.72
CCM2-215ENST00000482714 CBLN2Q8IUK8 224 aa10.56□□□□□ -0.72
CCM2-215ENST00000482714 LINC00476Q8WZB0 136 aa10.56□□□□□ -0.72
CCM2-215ENST00000482714 RPL39LQ96EH5 51 aaKnown RBP10.56□□□□□ -0.72
CCM2-215ENST00000482714 TRAV8-6A0A0B4J262 113 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 I3L3M4 83 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 TCAPO15273 167 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 TNFRSF6BO95407 300 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 NCR2O95944 276 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 RPS10P46783 165 aaKnown RBP10.55□□□□□ -0.72
CCM2-215ENST00000482714 PRELID3AQ96N28 172 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 TMEM70Q9BUB7 260 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 TRAPPC1Q9Y5R8 145 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 RYR2Q92736 4967 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 DNAH1Q9P2D7 4330 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 K7EP13 123 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 PMCHP20382 165 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 FABP9Q0Z7S8 132 aa10.55□□□□□ -0.72
CCM2-215ENST00000482714 MRPL18Q9H0U6 180 aaKnown RBP10.55□□□□□ -0.72
CCM2-215ENST00000482714 SMKR1H3BMG3 65 aa10.54□□□□□ -0.72
CCM2-215ENST00000482714 COTL1Q14019 142 aa10.54□□□□□ -0.72
CCM2-215ENST00000482714 LYSTQ99698 3801 aa10.54□□□□□ -0.72
CCM2-215ENST00000482714 COLCA2A8K830 154 aa10.53□□□□□ -0.72
CCM2-215ENST00000482714 LY6G6CO95867 125 aa10.53□□□□□ -0.72
CCM2-215ENST00000482714 PKIAP61925 76 aa10.53□□□□□ -0.72
CCM2-215ENST00000482714 Q9H8V8 135 aa10.53□□□□□ -0.72
CCM2-215ENST00000482714 TRBV25-1A0A075B6N4 114 aa10.52□□□□□ -0.73
CCM2-215ENST00000482714 LCE6AA0A183 80 aa10.52□□□□□ -0.73
CCM2-215ENST00000482714 IQCJQ1A5X6 159 aa10.52□□□□□ -0.73
CCM2-215ENST00000482714 KIR2DL4Q99706 377 aa10.52□□□□□ -0.73
CCM2-215ENST00000482714 ALMS1Q8TCU4 4167 aa10.52□□□□□ -0.73
CCM2-215ENST00000482714 IGHV1-24A0A0C4DH33 117 aa10.51□□□□□ -0.73
CCM2-215ENST00000482714 IGHV3-38A0A0C4DH36 116 aa10.51□□□□□ -0.73
CCM2-215ENST00000482714 K7EMI3 77 aa10.51□□□□□ -0.73
CCM2-215ENST00000482714 SIVA1O15304 175 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms