RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 Q8N976 141 aa12.16□□□□□ -0.46
CLK1-211ENST00000481641 ATRAIDQ6UW56 229 aa12.15□□□□□ -0.46
CLK1-211ENST00000481641 KIF25-AS1Q9Y6Z4 181 aa12.15□□□□□ -0.46
CLK1-211ENST00000481641 NTM-AS1Q6ZSK4 140 aa12.14□□□□□ -0.47
CLK1-211ENST00000481641 LINC00528Q8N1L1 170 aa12.14□□□□□ -0.47
CLK1-211ENST00000481641 C11orf52Q96A22 123 aa12.14□□□□□ -0.47
CLK1-211ENST00000481641 CHCHD5Q9BSY4 110 aa12.14□□□□□ -0.47
CLK1-211ENST00000481641 MANBALQ9NQG1 85 aa12.14□□□□□ -0.47
CLK1-211ENST00000481641 RAB19A4D1S5 217 aa12.13□□□□□ -0.47
CLK1-211ENST00000481641 IGLV2-8P01709 118 aa12.13□□□□□ -0.47
CLK1-211ENST00000481641 Q0VG73 95 aa12.13□□□□□ -0.47
CLK1-211ENST00000481641 CENPWQ5EE01 88 aa12.13□□□□□ -0.47
CLK1-211ENST00000481641 TPPP3Q9BW30 176 aa12.13□□□□□ -0.47
CLK1-211ENST00000481641 ANGP03950 147 aaKnown RBP12.12□□□□□ -0.47
CLK1-211ENST00000481641 SCXQ7RTU7 201 aa12.12□□□□□ -0.47
CLK1-211ENST00000481641 C1orf43Q9BWL3 253 aa12.12□□□□□ -0.47
CLK1-211ENST00000481641 TRAV1-1A0A0B4J248 108 aa12.11□□□□□ -0.47
CLK1-211ENST00000481641 CRPP02741 224 aa12.11□□□□□ -0.47
CLK1-211ENST00000481641 SMIM17P0DL12 118 aa12.11□□□□□ -0.47
CLK1-211ENST00000481641 AP1S3Q96PC3 154 aa12.11□□□□□ -0.47
CLK1-211ENST00000481641 MGPP08493 103 aa12.1□□□□□ -0.47
CLK1-211ENST00000481641 GAGE6Q13070 117 aa12.1□□□□□ -0.47
CLK1-211ENST00000481641 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
CLK1-211ENST00000481641 VAX2Q9UIW0 290 aa12.1□□□□□ -0.47
CLK1-211ENST00000481641 PLA2G1BP04054 148 aaKnown RBP12.09□□□□□ -0.47
CLK1-211ENST00000481641 IGLC6P0CF74 106 aa12.09□□□□□ -0.47
CLK1-211ENST00000481641 CLPSL2Q6UWE3 100 aa12.09□□□□□ -0.47
CLK1-211ENST00000481641 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.09□□□□□ -0.47
CLK1-211ENST00000481641 FER1L6-AS1Q8NA97 138 aa12.09□□□□□ -0.47
CLK1-211ENST00000481641 DAZAP1Q96EP5 407 aaKnown RBP12.09□□□□□ -0.47
CLK1-211ENST00000481641 C19orf71A6NCJ1 209 aa12.08□□□□□ -0.48
CLK1-211ENST00000481641 HLA-DQA1P01909 254 aa12.08□□□□□ -0.48
CLK1-211ENST00000481641 SULT1A2P50226 295 aa12.08□□□□□ -0.48
CLK1-211ENST00000481641 RAB5CP51148 216 aa12.08□□□□□ -0.48
CLK1-211ENST00000481641 M0QY20 66 aa12.07□□□□□ -0.48
CLK1-211ENST00000481641 GNG4P50150 75 aa12.07□□□□□ -0.48
CLK1-211ENST00000481641 RBX1P62877 108 aa12.07□□□□□ -0.48
CLK1-211ENST00000481641 SUMO4Q6EEV6 95 aa12.07□□□□□ -0.48
CLK1-211ENST00000481641 CHAC1Q9BUX1 264 aa12.07□□□□□ -0.48
CLK1-211ENST00000481641 TRBV20OR9-2A0A075B6H5 130 aa12.06□□□□□ -0.48
CLK1-211ENST00000481641 USP17L23D6RBM5 183 aa12.06□□□□□ -0.48
CLK1-211ENST00000481641 RPS20P60866 119 aaKnown RBP12.06□□□□□ -0.48
CLK1-211ENST00000481641 MEF2BQ02080 365 aaPredicted RBP12.06□□□□□ -0.48
CLK1-211ENST00000481641 TMEM97Q5BJF2 176 aa12.06□□□□□ -0.48
CLK1-211ENST00000481641 CIRBP-AS1Q8TBR5 109 aa12.06□□□□□ -0.48
CLK1-211ENST00000481641 DEFB104AQ8WTQ1 72 aa12.06□□□□□ -0.48
CLK1-211ENST00000481641 MED9Q9NWA0 146 aa12.06□□□□□ -0.48
CLK1-211ENST00000481641 TRBV25-1A0A075B6N4 114 aa12.05□□□□□ -0.48
CLK1-211ENST00000481641 TEX46H3BTG2 121 aa12.05□□□□□ -0.48
CLK1-211ENST00000481641 PKIAP61925 76 aa12.05□□□□□ -0.48
CLK1-211ENST00000481641 C14orf177Q52M58 125 aa12.05□□□□□ -0.48
CLK1-211ENST00000481641 EIF5AL1Q6IS14 154 aaKnown RBP12.05□□□□□ -0.48
CLK1-211ENST00000481641 LYZL1Q6UWQ5 148 aa12.05□□□□□ -0.48
CLK1-211ENST00000481641 LINC00269Q8N2A0 174 aa12.05□□□□□ -0.48
CLK1-211ENST00000481641 J3QL48 77 aa12.04□□□□□ -0.48
CLK1-211ENST00000481641 P01737 135 aa12.04□□□□□ -0.48
CLK1-211ENST00000481641 NKX2-5P52952 324 aaPredicted RBP12.04□□□□□ -0.48
CLK1-211ENST00000481641 CACNG7P62955 275 aa12.04□□□□□ -0.48
CLK1-211ENST00000481641 MIAQ16674 131 aa12.04□□□□□ -0.48
CLK1-211ENST00000481641 KRTAP26-1Q6PEX3 210 aa12.04□□□□□ -0.48
CLK1-211ENST00000481641 PRR34Q9NV39 138 aa12.04□□□□□ -0.48
CLK1-211ENST00000481641 IGHV1-24A0A0C4DH33 117 aa12.03□□□□□ -0.48
CLK1-211ENST00000481641 PDE6DO43924 150 aa12.03□□□□□ -0.48
CLK1-211ENST00000481641 PRSS1P07477 247 aa12.03□□□□□ -0.48
CLK1-211ENST00000481641 BCL2P10415 239 aa12.03□□□□□ -0.48
CLK1-211ENST00000481641 IQCJQ1A5X6 159 aa12.03□□□□□ -0.48
CLK1-211ENST00000481641 IFNA1P01562 189 aa12.02□□□□□ -0.49
CLK1-211ENST00000481641 NTF3P20783 257 aa12.02□□□□□ -0.49
CLK1-211ENST00000481641 SMIM12Q96EX1 92 aa12.02□□□□□ -0.49
CLK1-211ENST00000481641 IGLV10-54A0A075B6I4 117 aa12.01□□□□□ -0.49
CLK1-211ENST00000481641 H7C1H1 209 aa12.01□□□□□ -0.49
CLK1-211ENST00000481641 KRTAP10-4P60372 401 aaPredicted RBP12.01□□□□□ -0.49
CLK1-211ENST00000481641 TCTE3Q8IZS6 198 aa12.01□□□□□ -0.49
CLK1-211ENST00000481641 NUDT10Q8NFP7 164 aa12.01□□□□□ -0.49
CLK1-211ENST00000481641 NUDT11Q96G61 164 aa12.01□□□□□ -0.49
CLK1-211ENST00000481641 XKRY2A2RUG3 117 aa12□□□□□ -0.49
CLK1-211ENST00000481641 F2Z2F3 143 aa12□□□□□ -0.49
CLK1-211ENST00000481641 RASL11AQ6T310 242 aa12□□□□□ -0.49
CLK1-211ENST00000481641 SLC51BQ86UW2 128 aa12□□□□□ -0.49
CLK1-211ENST00000481641 C20orf203Q8NBC4 194 aa12□□□□□ -0.49
CLK1-211ENST00000481641 GFRA4Q9GZZ7 299 aa12□□□□□ -0.49
CLK1-211ENST00000481641 LRP1Q07954 4544 aaKnown RBP11.99□□□□□ -0.49
CLK1-211ENST00000481641 IGLV4-60A0A075B6I1 120 aa11.99□□□□□ -0.49
CLK1-211ENST00000481641 TRGC1P0CF51 173 aa11.99□□□□□ -0.49
CLK1-211ENST00000481641 REG3AQ06141 175 aa11.99□□□□□ -0.49
CLK1-211ENST00000481641 DPH3P1Q9H4G8 78 aa11.99□□□□□ -0.49
CLK1-211ENST00000481641 K7EN84 100 aa11.98□□□□□ -0.49
CLK1-211ENST00000481641 C9orf62Q8N4C0 152 aa11.98□□□□□ -0.49
CLK1-211ENST00000481641 TMEM243Q9BU79 118 aa11.98□□□□□ -0.49
CLK1-211ENST00000481641 RNASE7Q9H1E1 156 aaKnown RBP11.98□□□□□ -0.49
CLK1-211ENST00000481641 NIT2Q9NQR4 276 aa11.98□□□□□ -0.49
CLK1-211ENST00000481641 BIN3Q9NQY0 253 aa11.98□□□□□ -0.49
CLK1-211ENST00000481641 KRTAP29-1A8MX34 341 aaPredicted RBP11.97□□□□□ -0.49
CLK1-211ENST00000481641 OCC1Q8TAD7 63 aa11.97□□□□□ -0.49
CLK1-211ENST00000481641 TRAV26-2A0A0B4J265 109 aa11.96□□□□□ -0.49
CLK1-211ENST00000481641 CTRLP40313 264 aa11.96□□□□□ -0.49
CLK1-211ENST00000481641 TWIST1Q15672 202 aa11.96□□□□□ -0.49
CLK1-211ENST00000481641 DGAT2L7PQ6IED9 249 aa11.96□□□□□ -0.49
CLK1-211ENST00000481641 PANO1I0J062 215 aa11.95□□□□□ -0.5
CLK1-211ENST00000481641 WDR73Q6P4I2 378 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms