RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 FAM110AQ9BQ89 295 aa14.3□□□□□ -0.12
CCM2-214ENST00000481194 STPG4Q8N801 248 aa14.3□□□□□ -0.12
CCM2-214ENST00000481194 A0A096LPF7 62 aa14.3□□□□□ -0.12
CCM2-214ENST00000481194 ZNF664Q8N3J9 261 aa14.29□□□□□ -0.12
CCM2-214ENST00000481194 LEPROTO15243 131 aa14.29□□□□□ -0.12
CCM2-214ENST00000481194 ZNF462Q96JM2 2506 aa14.29□□□□□ -0.12
CCM2-214ENST00000481194 PROK1P58294 105 aa14.29□□□□□ -0.12
CCM2-214ENST00000481194 COX8CQ7Z4L0 72 aa14.28□□□□□ -0.12
CCM2-214ENST00000481194 RS1O15537 224 aa14.28□□□□□ -0.12
CCM2-214ENST00000481194 C11orf68Q9H3H3 251 aaKnown RBP14.28□□□□□ -0.12
CCM2-214ENST00000481194 KLK5Q9Y337 293 aaPredicted RBP14.28□□□□□ -0.12
CCM2-214ENST00000481194 ESM1Q9NQ30 184 aa14.28□□□□□ -0.12
CCM2-214ENST00000481194 ERG28Q9UKR5 140 aa14.28□□□□□ -0.12
CCM2-214ENST00000481194 SOCS3O14543 225 aa14.28□□□□□ -0.12
CCM2-214ENST00000481194 COX8AP10176 69 aa14.27□□□□□ -0.12
CCM2-214ENST00000481194 SAMD5Q5TGI4 173 aa14.27□□□□□ -0.12
CCM2-214ENST00000481194 PCNTO95613 3336 aa14.27□□□□□ -0.12
CCM2-214ENST00000481194 IGHV4-4A0A075B6R2 117 aa14.27□□□□□ -0.12
CCM2-214ENST00000481194 ZNF124Q15973 351 aa14.27□□□□□ -0.13
CCM2-214ENST00000481194 PKIGQ9Y2B9 76 aa14.27□□□□□ -0.13
CCM2-214ENST00000481194 Q6ZTI0 123 aa14.26□□□□□ -0.13
CCM2-214ENST00000481194 LINC00482Q8N8I6 264 aa14.26□□□□□ -0.13
CCM2-214ENST00000481194 DOPEY1Q5JWR5 2465 aa14.26□□□□□ -0.13
CCM2-214ENST00000481194 SIVA1O15304 175 aa14.26□□□□□ -0.13
CCM2-214ENST00000481194 C11orf45Q8TAV5 145 aa14.26□□□□□ -0.13
CCM2-214ENST00000481194 U3KQK5 164 aa14.26□□□□□ -0.13
CCM2-214ENST00000481194 S100A7L2Q5SY68 101 aa14.25□□□□□ -0.13
CCM2-214ENST00000481194 C9orf85Q96MD7 179 aa14.25□□□□□ -0.13
CCM2-214ENST00000481194 H7C423 109 aa14.25□□□□□ -0.13
CCM2-214ENST00000481194 LINC01545Q5VT33 79 aa14.25□□□□□ -0.13
CCM2-214ENST00000481194 PGPEP1Q9NXJ5 209 aa14.25□□□□□ -0.13
CCM2-214ENST00000481194 YPEL4Q96NS1 127 aa14.25□□□□□ -0.13
CCM2-214ENST00000481194 ATXN8Q156A1 80 aa14.24□□□□□ -0.13
CCM2-214ENST00000481194 TAL2Q16559 108 aa14.24□□□□□ -0.13
CCM2-214ENST00000481194 FAM222AQ5U5X8 452 aa14.24□□□□□ -0.13
CCM2-214ENST00000481194 NDUFA12Q9UI09 145 aa14.24□□□□□ -0.13
CCM2-214ENST00000481194 ODF3L2Q3SX64 289 aa14.24□□□□□ -0.13
CCM2-214ENST00000481194 A0A096LNT2 108 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 JPT2Q9H910 190 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 DKK2Q9UBU2 259 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 C20orf203Q8NBC4 194 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 PLXNB1O43157 2135 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 J3QQQ9 107 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 PRR9Q5T870 116 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 CFAP126Q5VTH2 177 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 TRBV6-4A0A1B0GX49 114 aa14.23□□□□□ -0.13
CCM2-214ENST00000481194 FGF6P10767 208 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 CNFNQ9BYD5 112 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 IGLC3P0DOY3 106 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 RPL32P62910 135 aaKnown RBP14.22□□□□□ -0.13
CCM2-214ENST00000481194 A0A0U1RRA0 63 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 OVOL2Q9BRP0 275 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 EREGO14944 169 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 FRMD6-AS1P0C7T7 363 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 HERV-K104P63124 156 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 Q6ZQT7 251 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 CLUHP3Q96NS8 147 aa14.22□□□□□ -0.13
CCM2-214ENST00000481194 CCDC168Q8NDH2 2452 aa14.21□□□□□ -0.13
CCM2-214ENST00000481194 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
CCM2-214ENST00000481194 SLC25A29Q8N8R3 303 aa14.21□□□□□ -0.13
CCM2-214ENST00000481194 C5orf42Q9H799 3197 aa14.21□□□□□ -0.14
CCM2-214ENST00000481194 DEFB4AO15263 64 aa14.21□□□□□ -0.14
CCM2-214ENST00000481194 HIST2H2BDQ6DRA6 164 aa14.21□□□□□ -0.14
CCM2-214ENST00000481194 C1orf43Q9BWL3 253 aa14.21□□□□□ -0.14
CCM2-214ENST00000481194 PRSS47A8MTI9 375 aa14.2□□□□□ -0.14
CCM2-214ENST00000481194 TRBV6-5A0A0K0K1A5 114 aa14.2□□□□□ -0.14
CCM2-214ENST00000481194 RANBP2P49792 3224 aaKnown RBP14.2□□□□□ -0.14
CCM2-214ENST00000481194 LINC00467Q9BRT7 94 aa14.2□□□□□ -0.14
CCM2-214ENST00000481194 AMTNQ6UX39 209 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 CST9LQ9H4G1 147 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 BPTFQ12830 3046 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 TRAV8-4A0A0B4J246 113 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 NUPR1O60356 82 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 SPINK8P0C7L1 97 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 KIR3DS1Q14943 382 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 BAALCQ8WXS3 180 aa14.19□□□□□ -0.14
CCM2-214ENST00000481194 EDN2P20800 178 aa14.18□□□□□ -0.14
CCM2-214ENST00000481194 C11orf21Q9P2W6 132 aa14.18□□□□□ -0.14
CCM2-214ENST00000481194 RNF185Q96GF1 192 aa14.18□□□□□ -0.14
CCM2-214ENST00000481194 CRYBA4P53673 196 aa14.17□□□□□ -0.14
CCM2-214ENST00000481194 RNASE13Q5GAN3 156 aaKnown RBP14.17□□□□□ -0.14
CCM2-214ENST00000481194 M0QY20 66 aa14.17□□□□□ -0.14
CCM2-214ENST00000481194 MYO18BQ8IUG5 2567 aa14.17□□□□□ -0.14
CCM2-214ENST00000481194 MPV17L2Q567V2 206 aa14.17□□□□□ -0.14
CCM2-214ENST00000481194 UBE2WQ96B02 151 aa14.17□□□□□ -0.14
CCM2-214ENST00000481194 XCL1P47992 114 aa14.16□□□□□ -0.14
CCM2-214ENST00000481194 IGKV2D-24A0A075B6R9 120 aa14.16□□□□□ -0.14
CCM2-214ENST00000481194 IGHV4-28A0A0C4DH34 117 aa14.16□□□□□ -0.14
CCM2-214ENST00000481194 CCL25O15444 150 aa14.16□□□□□ -0.14
CCM2-214ENST00000481194 SPATA12Q7Z6I5 190 aa14.16□□□□□ -0.14
CCM2-214ENST00000481194 NEXN-AS1Q8NBZ9 246 aa14.16□□□□□ -0.14
CCM2-214ENST00000481194 VSIG2Q96IQ7 327 aa14.16□□□□□ -0.14
CCM2-214ENST00000481194 RPL39P62891 51 aaKnown RBP14.15□□□□□ -0.14
CCM2-214ENST00000481194 COX7A2LO14548 114 aa14.15□□□□□ -0.14
CCM2-214ENST00000481194 FHL3Q13643 280 aa14.15□□□□□ -0.14
CCM2-214ENST00000481194 GTSF1LQ9H1H1 148 aa14.15□□□□□ -0.14
CCM2-214ENST00000481194 SIGMAR1Q99720 223 aa14.14□□□□□ -0.15
CCM2-214ENST00000481194 C11orf86A6NJI1 115 aa14.14□□□□□ -0.15
CCM2-214ENST00000481194 NPC2P61916 151 aa14.14□□□□□ -0.15
CCM2-214ENST00000481194 CLPSL2Q6UWE3 100 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 225.1 ms