RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 GZMBP10144 247 aa10.12□□□□□ -0.79
DDX56-210ENST00000479440 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
DDX56-210ENST00000479440 COX8CQ7Z4L0 72 aa10.12□□□□□ -0.79
DDX56-210ENST00000479440 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
DDX56-210ENST00000479440 TRBV6-1A0A0K0K1D8 114 aa10.11□□□□□ -0.79
DDX56-210ENST00000479440 SERF2P84101 59 aa10.11□□□□□ -0.79
DDX56-210ENST00000479440 IGHV1-24A0A0C4DH33 117 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 SSNA1O43805 119 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 KRTAP10-8P60410 259 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 UBE2G1P62253 170 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 IQCJQ1A5X6 159 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 ZNF674Q2M3X9 581 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 SPINK6Q6UWN8 80 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 FMC1Q96HJ9 113 aa10.1□□□□□ -0.79
DDX56-210ENST00000479440 NKX6-2Q9C056 277 aaPredicted RBP10.1□□□□□ -0.79
DDX56-210ENST00000479440 NDUFS6O75380 124 aaKnown RBP10.09□□□□□ -0.79
DDX56-210ENST00000479440 SLPIP03973 132 aa10.09□□□□□ -0.79
DDX56-210ENST00000479440 ATP6V0CP27449 155 aa10.09□□□□□ -0.79
DDX56-210ENST00000479440 UBE2G2P60604 165 aa10.09□□□□□ -0.79
DDX56-210ENST00000479440 MAJINQ3KP22 176 aa10.09□□□□□ -0.79
DDX56-210ENST00000479440 ZNF471Q9BX82 626 aaPredicted RBP10.09□□□□□ -0.79
DDX56-210ENST00000479440 A6NHS1 94 aa10.08□□□□□ -0.8
DDX56-210ENST00000479440 F5H697 171 aa10.08□□□□□ -0.8
DDX56-210ENST00000479440 INMT-MINDY4F8WBC2 141 aa10.08□□□□□ -0.8
DDX56-210ENST00000479440 TNFSF18Q9UNG2 199 aa10.08□□□□□ -0.8
DDX56-210ENST00000479440 IGKV2-24A0A0C4DH68 120 aa10.07□□□□□ -0.8
DDX56-210ENST00000479440 COX6A2Q02221 97 aa10.07□□□□□ -0.8
DDX56-210ENST00000479440 STPG4Q8N801 248 aa10.07□□□□□ -0.8
DDX56-210ENST00000479440 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
DDX56-210ENST00000479440 OR10AG1Q8NH19 301 aa10.07□□□□□ -0.8
DDX56-210ENST00000479440 FAM74A7A6NL05 159 aa10.06□□□□□ -0.8
DDX56-210ENST00000479440 CXCL1P09341 107 aa10.06□□□□□ -0.8
DDX56-210ENST00000479440 SMIM17P0DL12 118 aa10.06□□□□□ -0.8
DDX56-210ENST00000479440 SPANXN1Q5VSR9 72 aa10.06□□□□□ -0.8
DDX56-210ENST00000479440 CFAP161Q6P656 301 aa10.06□□□□□ -0.8
DDX56-210ENST00000479440 LTAP01374 205 aa10.05□□□□□ -0.8
DDX56-210ENST00000479440 RPS10P46783 165 aaKnown RBP10.05□□□□□ -0.8
DDX56-210ENST00000479440 CTXND1A0A1B0GTU2 59 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 A0A1B0GUV1 79 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 RAB5CP51148 216 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 LYPD6BQ8NI32 183 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 AP1S3Q96PC3 154 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 AQP10Q96PS8 301 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 TCEAL7Q9BRU2 100 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 PKIGQ9Y2B9 76 aa10.04□□□□□ -0.8
DDX56-210ENST00000479440 SNAI2O43623 268 aa10.03□□□□□ -0.8
DDX56-210ENST00000479440 SULT1A2P50226 295 aa10.03□□□□□ -0.8
DDX56-210ENST00000479440 C15orf56Q8N910 161 aa10.03□□□□□ -0.8
DDX56-210ENST00000479440 PRSS3P2Q8NHM4 247 aa10.03□□□□□ -0.8
DDX56-210ENST00000479440 TMEM243Q9BU79 118 aa10.03□□□□□ -0.8
DDX56-210ENST00000479440 LINC00474Q9P2X8 69 aa10.03□□□□□ -0.8
DDX56-210ENST00000479440 IGLV4-60A0A075B6I1 120 aa10.02□□□□□ -0.81
DDX56-210ENST00000479440 H7C1H1 209 aa10.02□□□□□ -0.81
DDX56-210ENST00000479440 OR5AL1P0C617 328 aa10.02□□□□□ -0.81
DDX56-210ENST00000479440 AKR1C3P42330 323 aa10.02□□□□□ -0.81
DDX56-210ENST00000479440 S100ZQ8WXG8 99 aa10.02□□□□□ -0.81
DDX56-210ENST00000479440 MARVELD1Q9BSK0 173 aa10.02□□□□□ -0.81
DDX56-210ENST00000479440 MUC21A0A0G2JKD1 596 aa10.01□□□□□ -0.81
DDX56-210ENST00000479440 UBE2L6O14933 153 aa10.01□□□□□ -0.81
DDX56-210ENST00000479440 UPK1BO75841 260 aa10.01□□□□□ -0.81
DDX56-210ENST00000479440 ZNF726P1Q15940 193 aa10.01□□□□□ -0.81
DDX56-210ENST00000479440 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
DDX56-210ENST00000479440 Q6ZRP5 223 aa10.01□□□□□ -0.81
DDX56-210ENST00000479440 GFRA4Q9GZZ7 299 aa10.01□□□□□ -0.81
DDX56-210ENST00000479440 GAGE12HA6NDE8 117 aa10□□□□□ -0.81
DDX56-210ENST00000479440 LINC00299Q6ZSB3 139 aa10□□□□□ -0.81
DDX56-210ENST00000479440 STOML3Q8TAV4 291 aa10□□□□□ -0.81
DDX56-210ENST00000479440 SSBP4Q9BWG4 385 aaPredicted RBP10□□□□□ -0.81
DDX56-210ENST00000479440 A0A096LNI7 61 aa9.99□□□□□ -0.81
DDX56-210ENST00000479440 MUC21A0A140T8X8 626 aa9.99□□□□□ -0.81
DDX56-210ENST00000479440 MGPP08493 103 aa9.99□□□□□ -0.81
DDX56-210ENST00000479440 LPAP08519 4548 aa9.98□□□□□ -0.81
DDX56-210ENST00000479440 GVQW2A0A096LPI5 108 aaPredicted RBP9.98□□□□□ -0.81
DDX56-210ENST00000479440 DEFA3P59666 94 aa9.98□□□□□ -0.81
DDX56-210ENST00000479440 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
DDX56-210ENST00000479440 PGLYRP4Q96LB8 373 aa9.98□□□□□ -0.81
DDX56-210ENST00000479440 NDUFA13Q9P0J0 144 aa9.98□□□□□ -0.81
DDX56-210ENST00000479440 FAM231BA6NCW3 169 aa9.97□□□□□ -0.81
DDX56-210ENST00000479440 M0QY20 66 aa9.97□□□□□ -0.81
DDX56-210ENST00000479440 FHITP49789 147 aa9.97□□□□□ -0.81
DDX56-210ENST00000479440 SSTP61278 116 aa9.97□□□□□ -0.81
DDX56-210ENST00000479440 AKR1C8PQ5T2L2 129 aa9.97□□□□□ -0.81
DDX56-210ENST00000479440 BORCS7-ASMTA0A0B4J1R7 106 aa9.96□□□□□ -0.82
DDX56-210ENST00000479440 A0A0U1RQV1 116 aa9.96□□□□□ -0.82
DDX56-210ENST00000479440 MAP1LC3B2A6NCE7 125 aa9.96□□□□□ -0.82
DDX56-210ENST00000479440 AMTP48728 403 aa9.96□□□□□ -0.82
DDX56-210ENST00000479440 CST9LP1Q5W188 147 aa9.96□□□□□ -0.82
DDX56-210ENST00000479440 KRTAP9-2Q9BYQ4 174 aa9.96□□□□□ -0.82
DDX56-210ENST00000479440 MAP1LC3BQ9GZQ8 125 aa9.96□□□□□ -0.82
DDX56-210ENST00000479440 IGKV3OR2-268A0A0C4DH90 116 aa9.95□□□□□ -0.82
DDX56-210ENST00000479440 S100A9P06702 114 aaKnown RBP9.95□□□□□ -0.82
DDX56-210ENST00000479440 NKX2-5P52952 324 aaPredicted RBP9.95□□□□□ -0.82
DDX56-210ENST00000479440 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
DDX56-210ENST00000479440 COTL1Q14019 142 aa9.94□□□□□ -0.82
DDX56-210ENST00000479440 RPL7L1Q6DKI1 246 aaKnown RBP9.94□□□□□ -0.82
DDX56-210ENST00000479440 INO80EQ8NBZ0 244 aaPredicted RBP9.94□□□□□ -0.82
DDX56-210ENST00000479440 RASL11AQ6T310 242 aa9.93□□□□□ -0.82
DDX56-210ENST00000479440 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
DDX56-210ENST00000479440 MED28Q9H204 178 aa9.93□□□□□ -0.82
DDX56-210ENST00000479440 DEFA1P59665 94 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms