RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 LOC100131303A0A0U1RQF7 123 aa8.46□□□□□ -1.06
EWSR1-216ENST00000479135 C11orf86A6NJI1 115 aa8.46□□□□□ -1.06
EWSR1-216ENST00000479135 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.46□□□□□ -1.06
EWSR1-216ENST00000479135 GREB1Q4ZG55 1949 aa8.46□□□□□ -1.06
EWSR1-216ENST00000479135 NRXN2Q9P2S2 1712 aa8.46□□□□□ -1.06
EWSR1-216ENST00000479135 MRPS12O15235 138 aaKnown RBP8.46□□□□□ -1.06
EWSR1-216ENST00000479135 EML6Q6ZMW3 1958 aa8.45□□□□□ -1.06
EWSR1-216ENST00000479135 TRBV7-3A0A075B6L6 115 aa8.45□□□□□ -1.06
EWSR1-216ENST00000479135 C7orf65Q6ZTY9 151 aa8.44□□□□□ -1.06
EWSR1-216ENST00000479135 C7orf33Q8WU49 177 aa8.44□□□□□ -1.06
EWSR1-216ENST00000479135 IGLV2-14P01704 120 aa8.44□□□□□ -1.06
EWSR1-216ENST00000479135 TMEM254Q8TBM7 123 aa8.44□□□□□ -1.06
EWSR1-216ENST00000479135 LY6LH3BQJ8 138 aa8.44□□□□□ -1.06
EWSR1-216ENST00000479135 NDUFC1O43677 76 aa8.44□□□□□ -1.06
EWSR1-216ENST00000479135 SPATA12Q7Z6I5 190 aa8.44□□□□□ -1.06
EWSR1-216ENST00000479135 E9PLN8 166 aa8.43□□□□□ -1.06
EWSR1-216ENST00000479135 Q6ZR03 302 aa8.43□□□□□ -1.06
EWSR1-216ENST00000479135 SRRM5B3KS81 715 aa8.43□□□□□ -1.06
EWSR1-216ENST00000479135 ACYP2P14621 99 aa8.43□□□□□ -1.06
EWSR1-216ENST00000479135 ZFP36P26651 326 aaKnown RBP8.42□□□□□ -1.06
EWSR1-216ENST00000479135 PSME4Q14997 1843 aa8.42□□□□□ -1.06
EWSR1-216ENST00000479135 E7EQL1 145 aa8.42□□□□□ -1.06
EWSR1-216ENST00000479135 LINC01547P58512 204 aaPredicted RBP8.42□□□□□ -1.06
EWSR1-216ENST00000479135 C9orf66Q5T8R8 295 aa8.42□□□□□ -1.06
EWSR1-216ENST00000479135 Q6P435 159 aa8.42□□□□□ -1.06
EWSR1-216ENST00000479135 UBR3Q6ZT12 1888 aa8.42□□□□□ -1.06
EWSR1-216ENST00000479135 TRBV10-1A0A0K0K1A3 114 aa8.42□□□□□ -1.06
EWSR1-216ENST00000479135 PDE6GP18545 87 aa8.42□□□□□ -1.06
EWSR1-216ENST00000479135 COL11A2P13942 1736 aaPredicted RBP8.41□□□□□ -1.06
EWSR1-216ENST00000479135 MIAQ16674 131 aa8.41□□□□□ -1.06
EWSR1-216ENST00000479135 LINC00311Q8N616 119 aa8.41□□□□□ -1.06
EWSR1-216ENST00000479135 LY6G6EA0A0G2JKS1 128 aa8.41□□□□□ -1.06
EWSR1-216ENST00000479135 IGKV2D-30A0A075B6S6 120 aa8.41□□□□□ -1.06
EWSR1-216ENST00000479135 IGKV2-30P06310 120 aa8.41□□□□□ -1.06
EWSR1-216ENST00000479135 FOXL2NBQ6ZUU3 175 aa8.41□□□□□ -1.06
EWSR1-216ENST00000479135 NDUFA4L2Q9NRX3 87 aa8.41□□□□□ -1.06
EWSR1-216ENST00000479135 MYOFQ9NZM1 2061 aa8.4□□□□□ -1.06
EWSR1-216ENST00000479135 TMEM14CQ9P0S9 112 aa8.4□□□□□ -1.06
EWSR1-216ENST00000479135 A0A087WVE0 104 aa8.4□□□□□ -1.06
EWSR1-216ENST00000479135 LRRC75A-AS1Q8N1F1 130 aa8.4□□□□□ -1.06
EWSR1-216ENST00000479135 DOCK1Q14185 1865 aa8.4□□□□□ -1.06
EWSR1-216ENST00000479135 C6orf99Q4VX62 202 aa8.4□□□□□ -1.06
EWSR1-216ENST00000479135 COX7CP15954 63 aa8.4□□□□□ -1.07
EWSR1-216ENST00000479135 REG3AQ06141 175 aa8.4□□□□□ -1.07
EWSR1-216ENST00000479135 TOMM6Q96B49 74 aa8.4□□□□□ -1.07
EWSR1-216ENST00000479135 PROK2Q9HC23 129 aa8.4□□□□□ -1.07
EWSR1-216ENST00000479135 FOCADQ5VW36 1801 aa8.4□□□□□ -1.07
EWSR1-216ENST00000479135 YPEL3P61236 119 aaPredicted RBP8.4□□□□□ -1.07
EWSR1-216ENST00000479135 IGLV2-8P01709 118 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 TRBV7-7A0A0K0K1E9 115 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 PLAC8L1A1L4L8 177 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 PLA2G2EQ9NZK7 142 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 LY6G6CO95867 125 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 IGLV2-11P01706 119 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 RNF5Q99942 180 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 A0A1B0GU69 56 aa8.39□□□□□ -1.07
EWSR1-216ENST00000479135 TRIAP1O43715 76 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 MDFICQ9P1T7 246 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 MAP1BP46821 2468 aaKnown RBP8.38□□□□□ -1.07
EWSR1-216ENST00000479135 ARHGAP32A7KAX9 2087 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 A0A0J9YXY3 114 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 LINC01545Q5VT33 79 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 COL11A1P12107 1806 aaPredicted RBP8.38□□□□□ -1.07
EWSR1-216ENST00000479135 E9PLD3 99 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 RBX1P62877 108 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 SBF2Q86WG5 1849 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 TRBV6-5A0A0K0K1A5 114 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 TP53TG3Q9ULZ0 132 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 PTPRDP23468 1912 aa8.38□□□□□ -1.07
EWSR1-216ENST00000479135 J3QRE1 110 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 SPTA1P02549 2419 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 DOCK5Q9H7D0 1870 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 H0Y9P7 68 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 C11orf45Q8TAV5 145 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 CHCHD10Q8WYQ3 142 aaPredicted RBP8.37□□□□□ -1.07
EWSR1-216ENST00000479135 TNCP24821 2201 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 DSCAMO60469 2012 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 WNK3Q9BYP7 1800 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 WT1-ASQ06250 92 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 LINC00308Q8TCZ7 52 aa8.37□□□□□ -1.07
EWSR1-216ENST00000479135 C4orf26Q17RF5 130 aa8.36□□□□□ -1.07
EWSR1-216ENST00000479135 PRAC2D3DTV9 90 aa8.35□□□□□ -1.07
EWSR1-216ENST00000479135 ATRXP46100 2492 aa8.35□□□□□ -1.07
EWSR1-216ENST00000479135 TAF1LQ8IZX4 1826 aa8.35□□□□□ -1.07
EWSR1-216ENST00000479135 ZFAND2AQ8N6M9 145 aa8.35□□□□□ -1.07
EWSR1-216ENST00000479135 SMIM10L1P0DMW3 83 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 UFSP1Q6NVU6 142 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 SMIM10Q96HG1 83 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 APLNQ9ULZ1 77 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 WIPF1O43516 503 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 C10orf25Q5T742 122 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 ATP11AUNQ6ZP68 121 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 CRIPAKQ8N1N5 446 aa8.34□□□□□ -1.07
EWSR1-216ENST00000479135 TMEM105Q8N8V8 129 aa8.34□□□□□ -1.08
EWSR1-216ENST00000479135 KIAA1549Q9HCM3 1950 aa8.34□□□□□ -1.08
EWSR1-216ENST00000479135 TRPM7Q96QT4 1865 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 K7EM74 188 aa8.33□□□□□ -1.08
EWSR1-216ENST00000479135 CTRLP40313 264 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms