RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 PROK1P58294 105 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 SNRPD3P62318 126 aaKnown RBP7.99□□□□□ -1.13
VPS52-217ENST00000478934 TCTEX1D4Q5JR98 221 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 POM121L12Q8N7R1 296 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 PGPEP1Q9NXJ5 209 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 Q9UF83 564 aa7.99□□□□□ -1.13
VPS52-217ENST00000478934 TRBV7-9A0A0J9YWB2 115 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 P0DMU3 169 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 FAM231AP0DMU4 169 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 FAM231CP0DMU5 169 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 COX6B1P14854 86 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 DSCR9P59020 149 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 ZNRF2Q8NHG8 242 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 TENM4Q6N022 2769 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 LINC01549A6NIU2 74 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 IGIPA6NJ69 53 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 Q6YL49 198 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 C9orf85Q96MD7 179 aa7.98□□□□□ -1.13
VPS52-217ENST00000478934 ACANP16112 2415 aa7.97□□□□□ -1.13
VPS52-217ENST00000478934 IGHV1OR15-1A0A075B7D0 117 aa7.97□□□□□ -1.13
VPS52-217ENST00000478934 RRN3P1Q2M238 152 aa7.97□□□□□ -1.13
VPS52-217ENST00000478934 MRPL16Q9NX20 251 aaKnown RBP7.97□□□□□ -1.13
VPS52-217ENST00000478934 FLNAP21333 2647 aaKnown RBP7.97□□□□□ -1.13
VPS52-217ENST00000478934 M0QY20 66 aa7.97□□□□□ -1.13
VPS52-217ENST00000478934 ZNF876PQ49A33 203 aa7.97□□□□□ -1.13
VPS52-217ENST00000478934 KIR2DL4Q99706 377 aa7.97□□□□□ -1.13
VPS52-217ENST00000478934 CR1P17927 2039 aa7.96□□□□□ -1.13
VPS52-217ENST00000478934 LOC107984156A0A0G2JMH3 177 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 DEFB131AP59861 70 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 KHDC1LQ5JSQ8 128 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 ARL17AQ8IVW1 177 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 C11orf44Q8N8P7 122 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 GTSF1LQ9H1H1 148 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 JMJD1CQ15652 2540 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 VCYO14598 125 aa7.96□□□□□ -1.14
VPS52-217ENST00000478934 RNASE13Q5GAN3 156 aaKnown RBP7.96□□□□□ -1.14
VPS52-217ENST00000478934 MTORP42345 2549 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 RBMY1BA6NDE4 496 aaKnown RBP7.95□□□□□ -1.14
VPS52-217ENST00000478934 RBMY1EA6NEQ0 496 aaKnown RBP7.95□□□□□ -1.14
VPS52-217ENST00000478934 RBMY1DP0C7P1 496 aaKnown RBP7.95□□□□□ -1.14
VPS52-217ENST00000478934 PMVKQ15126 192 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 TAL2Q16559 108 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 HIST2H2BCQ6DN03 193 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 SPANXB1Q9NS25 103 aaPredicted RBP7.95□□□□□ -1.14
VPS52-217ENST00000478934 TSSC4Q9Y5U2 329 aaPredicted RBP7.95□□□□□ -1.14
VPS52-217ENST00000478934 LGALS9O00182 355 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 FSHBP01225 129 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 Q5PR19 223 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 CEMP1Q6PRD7 247 aaPredicted RBP7.95□□□□□ -1.14
VPS52-217ENST00000478934 UBE2E2Q96LR5 201 aa7.95□□□□□ -1.14
VPS52-217ENST00000478934 GAGE13Q4V321 117 aa7.94□□□□□ -1.14
VPS52-217ENST00000478934 Q96MF0 132 aa7.94□□□□□ -1.14
VPS52-217ENST00000478934 J3QLI3 93 aa7.94□□□□□ -1.14
VPS52-217ENST00000478934 ELANEP08246 267 aa7.94□□□□□ -1.14
VPS52-217ENST00000478934 PSMB2P49721 201 aa7.94□□□□□ -1.14
VPS52-217ENST00000478934 ZNF843Q8N446 348 aa7.94□□□□□ -1.14
VPS52-217ENST00000478934 ZNF418Q8TF45 676 aaPredicted RBP7.94□□□□□ -1.14
VPS52-217ENST00000478934 A0A0J9YY99 117 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 TRBV27A0A0K0K1C4 114 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 ADARB2-AS1A8MUL3 147 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 TSPAN13O95857 204 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 PPP1R17O96001 155 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 TMEM61Q8N0U2 210 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 PTH2Q96A98 100 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 SPAG8Q99932 426 aaPredicted RBP7.93□□□□□ -1.14
VPS52-217ENST00000478934 Q6ZSN1 163 aa7.93□□□□□ -1.14
VPS52-217ENST00000478934 DLX4Q92988 240 aaPredicted RBP7.93□□□□□ -1.14
VPS52-217ENST00000478934 SETXQ7Z333 2677 aaKnown RBP7.92□□□□□ -1.14
VPS52-217ENST00000478934 A0A1B0GWB2 263 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 F8W1H4 67 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 SMAGPQ0VAQ4 97 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 PRO0461Q9UI25 63 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 C2CD3Q4AC94 2353 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 TMEM89A2RUT3 159 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 H7C2G1 150 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 SYT8Q8NBV8 401 aa7.92□□□□□ -1.14
VPS52-217ENST00000478934 A0A0J9YXV3 536 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 ODF3Q96PU9 254 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 ITPR2Q14571 2701 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 A0A1W2PRX2 142 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 TMEM238C9JI98 176 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 AZU1P20160 251 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 SMCPP49901 116 aaPredicted RBP7.91□□□□□ -1.14
VPS52-217ENST00000478934 DEFB113Q30KQ7 82 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 RAX2Q96IS3 184 aa7.91□□□□□ -1.14
VPS52-217ENST00000478934 TRBV6-5A0A0K0K1A5 114 aa7.9□□□□□ -1.14
VPS52-217ENST00000478934 H3BMM0 161 aa7.9□□□□□ -1.14
VPS52-217ENST00000478934 J3QQQ9 107 aa7.9□□□□□ -1.14
VPS52-217ENST00000478934 UBE2D1P51668 147 aa7.9□□□□□ -1.14
VPS52-217ENST00000478934 HERVK_113P61574 105 aa7.9□□□□□ -1.14
VPS52-217ENST00000478934 RPL32P62910 135 aaKnown RBP7.9□□□□□ -1.14
VPS52-217ENST00000478934 CFC1BP0CG36 223 aa7.9□□□□□ -1.15
VPS52-217ENST00000478934 CFC1P0CG37 223 aa7.9□□□□□ -1.15
VPS52-217ENST00000478934 AMELXQ99217 191 aa7.9□□□□□ -1.15
VPS52-217ENST00000478934 TIMM17AQ99595 171 aa7.9□□□□□ -1.15
VPS52-217ENST00000478934 A8MZ25 164 aa7.89□□□□□ -1.15
VPS52-217ENST00000478934 LGALS3P17931 250 aaKnown RBP7.89□□□□□ -1.15
VPS52-217ENST00000478934 TRPT1Q86TN4 253 aaKnown RBP7.89□□□□□ -1.15
VPS52-217ENST00000478934 NDUFA11Q86Y39 141 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms