RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 OR2D3Q8NGH3 330 aa5.56□□□□□ -1.52
ERCC8-205ENST00000477893 C11orf52Q96A22 123 aa5.56□□□□□ -1.52
ERCC8-205ENST00000477893 DAZAP1Q96EP5 407 aaKnown RBP5.56□□□□□ -1.52
ERCC8-205ENST00000477893 DAZ3Q9NR90 486 aaKnown RBP5.56□□□□□ -1.52
ERCC8-205ENST00000477893 IBA57-AS1B1ANH7 110 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 K7EP13 123 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 PDE6DO43924 150 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 IGLV2-8P01709 118 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 SMIM17P0DL12 118 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 CEBPGP53567 150 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 HAMPP81172 84 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
ERCC8-205ENST00000477893 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
ERCC8-205ENST00000477893 URGCP-MRPS24S4R325 110 aa5.55□□□□□ -1.52
ERCC8-205ENST00000477893 TRBV20OR9-2A0A075B6H5 130 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 A0A087WWC5 75 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 IGLV5-52A0A0A0MRZ9 124 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 SNAI2O43623 268 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 P01737 135 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 KRTAP10-1P60331 282 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 FER1L6-AS1Q8NA97 138 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 DNAJC30Q96LL9 226 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 AP1S3Q96PC3 154 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 VAX2Q9UIW0 290 aa5.54□□□□□ -1.52
ERCC8-205ENST00000477893 TRBV7-3A0A075B6L6 115 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 A0A087WX48 190 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 A0A1B0GVG6 124 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 TMEM262E9PQX1 116 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 CXCL1P09341 107 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 OR5AL1P0C617 328 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 RAB4BP61018 213 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 UBE2D3P61077 147 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 UBE2D2P62837 147 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 WFDC2Q14508 124 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 KCNIP4Q6PIL6 250 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 NEXN-AS1Q8NBZ9 246 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 KLK12Q9UKR0 248 aa5.53□□□□□ -1.52
ERCC8-205ENST00000477893 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.52□□□□□ -1.53
ERCC8-205ENST00000477893 IGKV2D-24A0A075B6R9 120 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 C19orf71A6NCJ1 209 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 LRCOL1A6NCL2 159 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 RPS20P60866 119 aaKnown RBP5.52□□□□□ -1.53
ERCC8-205ENST00000477893 NIT1Q86X76 327 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 Q8N814 137 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 DEFB104AQ8WTQ1 72 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 UBE2WQ96B02 151 aa5.52□□□□□ -1.53
ERCC8-205ENST00000477893 RNASE7Q9H1E1 156 aaKnown RBP5.52□□□□□ -1.53
ERCC8-205ENST00000477893 XKRY2A2RUG3 117 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 K7EN84 100 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 IGLC6P0CF74 106 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 GCSHP23434 173 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 LAGE3Q14657 143 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 TOR2AQ5JU69 321 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 SUMO4Q6EEV6 95 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 CLPSL2Q6UWE3 100 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 LYZL1Q6UWQ5 148 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 C15orf54Q8N8G6 183 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.51□□□□□ -1.53
ERCC8-205ENST00000477893 BAALCQ8WXS3 180 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 CHCHD5Q9BSY4 110 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 TM2D2Q9BX73 214 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 FAT1Q14517 4588 aa5.51□□□□□ -1.53
ERCC8-205ENST00000477893 TRBV6-8A0A0A6YYG3 113 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 TRAV8-3A0A0A6YYJ7 113 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 CRPP02741 224 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 CACNG7P62955 275 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 BLOC1S1P78537 153 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 GAGE6Q13070 117 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 MPV17L2Q567V2 206 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 Q8N1X5 172 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 Q8N976 141 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 NUDT10Q8NFP7 164 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 OR10G8Q8NGN5 311 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 SMIM12Q96EX1 92 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 NUDT11Q96G61 164 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 RPP21Q9H633 154 aaKnown RBP5.5□□□□□ -1.53
ERCC8-205ENST00000477893 BIN3Q9NQY0 253 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 KIF25-AS1Q9Y6Z4 181 aa5.5□□□□□ -1.53
ERCC8-205ENST00000477893 SMR3BP02814 79 aaPredicted RBP5.49□□□□□ -1.53
ERCC8-205ENST00000477893 ANGP03950 147 aaKnown RBP5.49□□□□□ -1.53
ERCC8-205ENST00000477893 TAGLN2P37802 199 aaKnown RBP5.49□□□□□ -1.53
ERCC8-205ENST00000477893 TWIST1Q15672 202 aa5.49□□□□□ -1.53
ERCC8-205ENST00000477893 LINC01620Q4KN68 170 aa5.49□□□□□ -1.53
ERCC8-205ENST00000477893 OCC1Q8TAD7 63 aa5.49□□□□□ -1.53
ERCC8-205ENST00000477893 RMI2Q96E14 147 aa5.49□□□□□ -1.53
ERCC8-205ENST00000477893 EIF5A2Q9GZV4 153 aaKnown RBP5.49□□□□□ -1.53
ERCC8-205ENST00000477893 TRAV26-2A0A0B4J265 109 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 H7C1H1 209 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 GATCO43716 136 aaKnown RBP5.48□□□□□ -1.53
ERCC8-205ENST00000477893 HLA-DQA1P01909 254 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 TRGC1P0CF51 173 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 NTF3P20783 257 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 CTRLP40313 264 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 XGP55808 180 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 ELOBQ15370 118 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 NTM-AS1Q6ZSK4 140 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
ERCC8-205ENST00000477893 DPH3P1Q9H4G8 78 aa5.48□□□□□ -1.53
ERCC8-205ENST00000477893 DNAH8Q96JB1 4490 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms