RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 FOXI2Q6ZQN5 318 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 Q8N9P0 234 aaPredicted RBP1.88□□□□□ -2.11
HMGN4-202ENST00000477243 C5orf17Q8NAS9 161 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 UBALD1Q8TB05 177 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 AQP10Q96PS8 301 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 IMMP2LQ96T52 175 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 NAA38Q9BRA0 125 aaKnown RBP1.88□□□□□ -2.11
HMGN4-202ENST00000477243 SEC11CQ9BY50 192 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 TNFRSF19Q9NS68 423 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 CCL26Q9Y258 94 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 ARID1BQ8NFD5 2236 aaPredicted RBP1.88□□□□□ -2.11
HMGN4-202ENST00000477243 TNRC6BQ9UPQ9 1833 aaKnown RBP1.88□□□□□ -2.11
HMGN4-202ENST00000477243 LYSTQ99698 3801 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 RP1P56715 2156 aa1.88□□□□□ -2.11
HMGN4-202ENST00000477243 IGLV4-69A0A075B6H9 119 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 IGKV1D-37A0A075B6S9 117 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 TRGV5A0A0B4J1U4 118 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 TRBV10-2A0A0K0K1G8 114 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 C17orf112F2Z3M2 114 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 H3BT86 120 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 GEMIN2O14893 280 aaKnown RBP1.87□□□□□ -2.11
HMGN4-202ENST00000477243 PIN1P1O15428 100 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 KLF7O75840 302 aaPredicted RBP1.87□□□□□ -2.11
HMGN4-202ENST00000477243 CTSDP07339 412 aaPredicted RBP1.87□□□□□ -2.11
HMGN4-202ENST00000477243 SPINK8P0C7L1 97 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 CCL4P13236 92 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 COL8A2P25067 703 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 HMGA2P52926 109 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 FOXA1P55317 472 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 PCBD1P61457 104 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 SUPT4H1P63272 117 aaKnown RBP1.87□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF816Q0VGE8 651 aaPredicted RBP1.87□□□□□ -2.11
HMGN4-202ENST00000477243 KISS1Q15726 138 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 KRTAP24-1Q3LI83 254 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 LGALSLQ3ZCW2 172 aaPredicted RBP1.87□□□□□ -2.11
HMGN4-202ENST00000477243 Q6ZUT4 128 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 OR5AS1Q8N127 324 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 ST20-AS1Q8NBB2 130 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 PLPP5Q8NEB5 264 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 KLF14Q8TD94 323 aaPredicted RBP1.87□□□□□ -2.11
HMGN4-202ENST00000477243 PSMF1Q92530 271 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 C16orf95Q9H693 158 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 SCN3AQ9NY46 2000 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 TPRKBQ9Y3C4 175 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 FAM215AQ9Y5M1 114 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 DNAJC15Q9Y5T4 150 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 SERP1Q9Y6X1 66 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 MYH8P13535 1937 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 CSMD3Q7Z407 3707 aa1.87□□□□□ -2.11
HMGN4-202ENST00000477243 SEC16AO15027 2179 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 CACNA1CQ13936 2221 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
HMGN4-202ENST00000477243 PTPRDP23468 1912 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 TRAV7A0A075B6U4 112 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 IGKV3D-15A0A087WSY6 115 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 C3orf85A0A1B0GTC6 90 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 TCRBV3S1A0A5B6 114 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 M0R2P5 195 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 CPSF4O95639 269 aaKnown RBP1.86□□□□□ -2.11
HMGN4-202ENST00000477243 CD3DP04234 171 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 LINC00032P0C843 101 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF846Q147U1 533 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 LELP1Q5T871 98 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 C9orf153Q5TBE3 101 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 C3orf56Q8N813 242 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 OR5AK2Q8NH90 309 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 CCL4L1Q8NHW4 92 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 LCN9Q8WX39 176 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 AQP3Q92482 292 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 CHCHD1Q96BP2 118 aaKnown RBP1.86□□□□□ -2.11
HMGN4-202ENST00000477243 LINC00526Q96FQ7 95 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 PKMYT1Q99640 499 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 KRTAP2-2Q9BYT5 123 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 KRTAP2-1Q9BYU5 128 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 AGPAT4-IT1Q9H0P7 198 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 BCL2L10Q9HD36 194 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 RPL26L1Q9UNX3 145 aaKnown RBP1.86□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF443Q9Y2A4 671 aaPredicted RBP1.86□□□□□ -2.11
HMGN4-202ENST00000477243 LSM2Q9Y333 95 aaKnown RBP1.86□□□□□ -2.11
HMGN4-202ENST00000477243 LY96Q9Y6Y9 160 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 PLCE1Q9P212 2302 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 CCDC88CQ9P219 2028 aa1.86□□□□□ -2.11
HMGN4-202ENST00000477243 PDCD11Q14690 1871 aaKnown RBP1.86□□□□□ -2.11
HMGN4-202ENST00000477243 CEP192Q8TEP8 1941 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 MALRD1Q5VYJ5 2156 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 FAT3Q8TDW7 4589 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 C17orf98A8MV24 154 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 ZNF736B4DX44 427 aaPredicted RBP1.85□□□□□ -2.11
HMGN4-202ENST00000477243 MCRIP1C9JLW8 97 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 TMEM262E9PQX1 116 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 H7C2G1 150 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 OR1I1O60431 355 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 TRACP01848 142 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 DNAH10OSP0CZ25 163 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 CRYGAP11844 174 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 CKS2P33552 79 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 BLCAPP62952 87 aa1.85□□□□□ -2.11
HMGN4-202ENST00000477243 CIRBPQ14011 172 aaKnown RBP1.85□□□□□ -2.11
HMGN4-202ENST00000477243 SPANXN5Q5MJ07 72 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms