RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 LINC01559Q495D7 138 aa7.55□□□□□ -1.2
HDAC6-219ENST00000476625 FAM162BQ5T6X4 162 aa7.55□□□□□ -1.2
HDAC6-219ENST00000476625 SPACA4Q8TDM5 124 aa7.55□□□□□ -1.2
HDAC6-219ENST00000476625 KIF25-AS1Q9Y6Z4 181 aa7.55□□□□□ -1.2
HDAC6-219ENST00000476625 RAB4BP61018 213 aa7.54□□□□□ -1.2
HDAC6-219ENST00000476625 RPL7L1Q6DKI1 246 aaKnown RBP7.54□□□□□ -1.2
HDAC6-219ENST00000476625 Q6ZNX1 250 aa7.54□□□□□ -1.2
HDAC6-219ENST00000476625 INO80EQ8NBZ0 244 aaPredicted RBP7.54□□□□□ -1.2
HDAC6-219ENST00000476625 DPH3Q96FX2 82 aa7.54□□□□□ -1.2
HDAC6-219ENST00000476625 LPAP08519 4548 aa7.53□□□□□ -1.2
HDAC6-219ENST00000476625 IGLV4-60A0A075B6I1 120 aa7.53□□□□□ -1.2
HDAC6-219ENST00000476625 C20orf203Q8NBC4 194 aa7.53□□□□□ -1.2
HDAC6-219ENST00000476625 DERL1Q9BUN8 251 aa7.53□□□□□ -1.2
HDAC6-219ENST00000476625 TRBV6-1A0A0K0K1D8 114 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 F5H697 171 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 GAS8-AS1O95177 125 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 UBE2G1P62253 170 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 CNBPP62633 177 aaKnown RBP7.52□□□□□ -1.21
HDAC6-219ENST00000476625 REG3AQ06141 175 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 COX8CQ7Z4L0 72 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 LYPD6BQ8NI32 183 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 AQP10Q96PS8 301 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 TNFSF18Q9UNG2 199 aa7.52□□□□□ -1.21
HDAC6-219ENST00000476625 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
HDAC6-219ENST00000476625 IGKV2-24A0A0C4DH68 120 aa7.51□□□□□ -1.21
HDAC6-219ENST00000476625 CTXND1A0A1B0GTU2 59 aa7.51□□□□□ -1.21
HDAC6-219ENST00000476625 LTAP01374 205 aa7.51□□□□□ -1.21
HDAC6-219ENST00000476625 SERF2P84101 59 aa7.51□□□□□ -1.21
HDAC6-219ENST00000476625 LINC01600Q96MT4 127 aa7.51□□□□□ -1.21
HDAC6-219ENST00000476625 ZNF471Q9BX82 626 aaPredicted RBP7.51□□□□□ -1.21
HDAC6-219ENST00000476625 MBP02144 154 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 PRR3P79522 188 aaKnown RBP7.5□□□□□ -1.21
HDAC6-219ENST00000476625 COX6A2Q02221 97 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 HIGD2BQ4VC39 106 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 C15orf56Q8N910 161 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 PRSS3P2Q8NHM4 247 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 GTSF1Q8WW33 167 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 HIST1H2BAQ96A08 127 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 FMC1Q96HJ9 113 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 DPH3P1Q9H4G8 78 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 VAX2Q9UIW0 290 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 ZFP30Q9Y2G7 519 aa7.5□□□□□ -1.21
HDAC6-219ENST00000476625 TRBV25-1A0A075B6N4 114 aa7.49□□□□□ -1.21
HDAC6-219ENST00000476625 HMSDA8MTL9 139 aa7.49□□□□□ -1.21
HDAC6-219ENST00000476625 MGPP08493 103 aa7.49□□□□□ -1.21
HDAC6-219ENST00000476625 FHITP49789 147 aa7.49□□□□□ -1.21
HDAC6-219ENST00000476625 MAJINQ3KP22 176 aa7.49□□□□□ -1.21
HDAC6-219ENST00000476625 CLRN3Q8NCR9 226 aa7.49□□□□□ -1.21
HDAC6-219ENST00000476625 BORCS7-ASMTA0A0B4J1R7 106 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 IGKV3OR2-268A0A0C4DH90 116 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 A0A1B0GV50 99 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 MAP1LC3B2A6NCE7 125 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 SNAI2O43623 268 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 GZMBP10144 247 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 AKR1C3P42330 323 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 EIF5AP63241 154 aaKnown RBP7.48□□□□□ -1.21
HDAC6-219ENST00000476625 CST9LP1Q5W188 147 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 TCTE3Q8IZS6 198 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 MAP1LC3BQ9GZQ8 125 aa7.48□□□□□ -1.21
HDAC6-219ENST00000476625 FXYD6-FXYD2A0A087WZ82 144 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 IGHV1-24A0A0C4DH33 117 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 A0A0J9YXV3 536 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 NKX2-5P52952 324 aaPredicted RBP7.47□□□□□ -1.21
HDAC6-219ENST00000476625 KRTAP10-8P60410 259 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 ZNF345Q14585 488 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 IQCJQ1A5X6 159 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 SPANXN1Q5VSR9 72 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 AKAP14Q86UN6 197 aa7.47□□□□□ -1.21
HDAC6-219ENST00000476625 A0A096LNI7 61 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 GAGE12HA6NDE8 117 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 PAGE4O60829 102 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 SUMO4Q6EEV6 95 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 WDR73Q6P4I2 378 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 STPG4Q8N801 248 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 C7orf33Q8WU49 177 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 RNF185Q96GF1 192 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 SSBP4Q9BWG4 385 aaPredicted RBP7.46□□□□□ -1.22
HDAC6-219ENST00000476625 AP5S1Q9NUS5 200 aa7.46□□□□□ -1.22
HDAC6-219ENST00000476625 M0QY20 66 aa7.45□□□□□ -1.22
HDAC6-219ENST00000476625 PKIAP61925 76 aa7.45□□□□□ -1.22
HDAC6-219ENST00000476625 AKR1C8PQ5T2L2 129 aa7.45□□□□□ -1.22
HDAC6-219ENST00000476625 STOML3Q8TAV4 291 aa7.45□□□□□ -1.22
HDAC6-219ENST00000476625 LINC00526Q96FQ7 95 aa7.45□□□□□ -1.22
HDAC6-219ENST00000476625 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.44□□□□□ -1.22
HDAC6-219ENST00000476625 TMEM243Q9BU79 118 aa7.44□□□□□ -1.22
HDAC6-219ENST00000476625 MLST8Q9BVC4 326 aa7.44□□□□□ -1.22
HDAC6-219ENST00000476625 TPPP3Q9BW30 176 aa7.44□□□□□ -1.22
HDAC6-219ENST00000476625 KANTRA0A1W2PQU2 76 aa7.43□□□□□ -1.22
HDAC6-219ENST00000476625 G3V3Q6 166 aa7.43□□□□□ -1.22
HDAC6-219ENST00000476625 ARPC5O15511 151 aa7.43□□□□□ -1.22
HDAC6-219ENST00000476625 OR5AL1P0C617 328 aa7.43□□□□□ -1.22
HDAC6-219ENST00000476625 TMEM97Q5BJF2 176 aa7.43□□□□□ -1.22
HDAC6-219ENST00000476625 EIF5AL1Q6IS14 154 aaKnown RBP7.43□□□□□ -1.22
HDAC6-219ENST00000476625 KCNRGQ8N5I3 272 aa7.43□□□□□ -1.22
HDAC6-219ENST00000476625 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-219ENST00000476625 AP1S3Q96PC3 154 aa7.43□□□□□ -1.22
HDAC6-219ENST00000476625 NKX6-2Q9C056 277 aaPredicted RBP7.43□□□□□ -1.22
HDAC6-219ENST00000476625 CYTL1Q9NRR1 136 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 170.8 ms