RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 VMO1Q7Z5L0 202 aa10.28□□□□□ -0.76
HDAC1-206ENST00000476391 WDFY4Q6ZS81 3184 aa10.27□□□□□ -0.76
HDAC1-206ENST00000476391 K7ENP7 123 aa10.27□□□□□ -0.76
HDAC1-206ENST00000476391 TIRAPP58753 221 aa10.27□□□□□ -0.76
HDAC1-206ENST00000476391 ITLN2Q8WWU7 325 aaPredicted RBP10.27□□□□□ -0.76
HDAC1-206ENST00000476391 DPM3Q9P2X0 92 aa10.27□□□□□ -0.76
HDAC1-206ENST00000476391 GNRH2O43555 120 aa10.27□□□□□ -0.77
HDAC1-206ENST00000476391 C22orf34Q6ZV56 151 aa10.27□□□□□ -0.77
HDAC1-206ENST00000476391 C20orf203Q8NBC4 194 aa10.27□□□□□ -0.77
HDAC1-206ENST00000476391 JPT2Q9H910 190 aa10.27□□□□□ -0.77
HDAC1-206ENST00000476391 IGLV4-3A0A075B6K6 122 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 A0A1W2PNU3 283 aaPredicted RBP10.26□□□□□ -0.77
HDAC1-206ENST00000476391 MRPS36P82909 103 aaKnown RBP10.26□□□□□ -0.77
HDAC1-206ENST00000476391 ATP1A1-AS1Q5TC04 95 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 APRG1Q8IVJ8 170 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 PYGO1Q9Y3Y4 419 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 IGHV3OR16-13A0A075B7E8 117 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 IGHV3-74A0A0B4J1X5 117 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 F5H697 171 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 BEAN1Q3B7T3 259 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 U3KQE9 123 aa10.26□□□□□ -0.77
HDAC1-206ENST00000476391 PRRC2CQ9Y520 2896 aaKnown RBP10.25□□□□□ -0.77
HDAC1-206ENST00000476391 IGHV3OR16-10A0A075B7F0 116 aa10.25□□□□□ -0.77
HDAC1-206ENST00000476391 BAALC-AS2P0C853 105 aa10.25□□□□□ -0.77
HDAC1-206ENST00000476391 C15orf32Q32M92 178 aa10.25□□□□□ -0.77
HDAC1-206ENST00000476391 NPC2P61916 151 aa10.25□□□□□ -0.77
HDAC1-206ENST00000476391 KALRNO60229 2985 aa10.25□□□□□ -0.77
HDAC1-206ENST00000476391 MALP21145 153 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 KLRB1Q12918 225 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 DEFB123Q8N688 67 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 NDUFC2-KCTD14E9PQ53 114 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 M0R1W7 72 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 KLK9Q2XQG4 91 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 VSIG2Q96IQ7 327 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 C20orf173Q96LM9 149 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 PRO0628Q9UI54 55 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 KLK9Q9UKQ9 250 aa10.24□□□□□ -0.77
HDAC1-206ENST00000476391 WNK2Q9Y3S1 2297 aa10.23□□□□□ -0.77
HDAC1-206ENST00000476391 FAM27E3Q08E93 113 aa10.23□□□□□ -0.77
HDAC1-206ENST00000476391 Q6JHZ5 121 aa10.23□□□□□ -0.77
HDAC1-206ENST00000476391 NACAE9PAV3 2078 aa10.23□□□□□ -0.77
HDAC1-206ENST00000476391 TRAV12-3A0A0B4J271 114 aa10.23□□□□□ -0.77
HDAC1-206ENST00000476391 RNF152Q8N8N0 203 aa10.23□□□□□ -0.77
HDAC1-206ENST00000476391 RNASE6Q93091 150 aaKnown RBP10.23□□□□□ -0.77
HDAC1-206ENST00000476391 C22orf24Q9Y442 160 aa10.23□□□□□ -0.77
HDAC1-206ENST00000476391 A0A087WWL8 130 aa10.22□□□□□ -0.77
HDAC1-206ENST00000476391 F8WDY8 70 aa10.22□□□□□ -0.77
HDAC1-206ENST00000476391 IGHV3-49A0A0A0MS15 119 aa10.22□□□□□ -0.77
HDAC1-206ENST00000476391 FAM110DQ8TAY7 271 aaPredicted RBP10.22□□□□□ -0.77
HDAC1-206ENST00000476391 SYNJ2BPP57105 145 aa10.21□□□□□ -0.77
HDAC1-206ENST00000476391 LY6G5BQ8NDX9 201 aa10.21□□□□□ -0.77
HDAC1-206ENST00000476391 M0QY20 66 aa10.21□□□□□ -0.78
HDAC1-206ENST00000476391 RPL11P62913 178 aaKnown RBP10.21□□□□□ -0.78
HDAC1-206ENST00000476391 IGHV7-81A0A0B4J1V7 117 aa10.2□□□□□ -0.78
HDAC1-206ENST00000476391 ZNF415Q09FC8 603 aa10.2□□□□□ -0.78
HDAC1-206ENST00000476391 IGFL2Q6UWQ7 119 aa10.2□□□□□ -0.78
HDAC1-206ENST00000476391 CCDC140Q96MF4 163 aa10.2□□□□□ -0.78
HDAC1-206ENST00000476391 NDUFC2O95298 119 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 CIRBPQ14011 172 aaKnown RBP10.19□□□□□ -0.78
HDAC1-206ENST00000476391 CLEC19AQ6UXS0 136 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 Q8N6K4 173 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 FDCSPQ8NFU4 85 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 FAM215AQ9Y5M1 114 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 TINCRA0A1B0GVN0 87 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 USP17L23D6RBM5 183 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
HDAC1-206ENST00000476391 DNAL4O96015 105 aa10.18□□□□□ -0.78
HDAC1-206ENST00000476391 CD28P10747 220 aa10.18□□□□□ -0.78
HDAC1-206ENST00000476391 BSPH1Q075Z2 132 aa10.18□□□□□ -0.78
HDAC1-206ENST00000476391 ZFHX4Q86UP3 3567 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 PFN2P35080 140 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 NDUFA1O15239 70 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 FAM74A4Q5TZK3 123 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 PRIMA1Q86XR5 153 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 LINC01561Q8N1V8 128 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 LINC00308Q8TCZ7 52 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 ROS1P08922 2347 aa10.17□□□□□ -0.78
HDAC1-206ENST00000476391 ODF3BA8MYP8 253 aa10.16□□□□□ -0.78
HDAC1-206ENST00000476391 SOCS3O14543 225 aa10.16□□□□□ -0.78
HDAC1-206ENST00000476391 J3QLI3 93 aa10.16□□□□□ -0.78
HDAC1-206ENST00000476391 C10orf105Q8TEF2 133 aa10.16□□□□□ -0.78
HDAC1-206ENST00000476391 FAM104AQ969W3 186 aa10.16□□□□□ -0.78
HDAC1-206ENST00000476391 IGKV3D-7A0A0C4DH55 119 aa10.15□□□□□ -0.78
HDAC1-206ENST00000476391 ABCA4P78363 2273 aa10.15□□□□□ -0.78
HDAC1-206ENST00000476391 SMG1Q96Q15 3661 aaKnown RBP10.15□□□□□ -0.78
HDAC1-206ENST00000476391 A8MZ25 164 aa10.15□□□□□ -0.79
HDAC1-206ENST00000476391 KLLNB2CW77 178 aa10.15□□□□□ -0.79
HDAC1-206ENST00000476391 EPM2AB3EWF7 344 aa10.15□□□□□ -0.79
HDAC1-206ENST00000476391 PSMB8P28062 276 aa10.15□□□□□ -0.79
HDAC1-206ENST00000476391 FHL2Q14192 279 aa10.15□□□□□ -0.79
HDAC1-206ENST00000476391 ECSCRQ19T08 205 aa10.14□□□□□ -0.79
HDAC1-206ENST00000476391 Q8N2B8 174 aa10.14□□□□□ -0.79
HDAC1-206ENST00000476391 PKDREJQ9NTG1 2253 aa10.14□□□□□ -0.79
HDAC1-206ENST00000476391 A0A087WVE0 104 aa10.13□□□□□ -0.79
HDAC1-206ENST00000476391 Q8N9W7 124 aa10.13□□□□□ -0.79
HDAC1-206ENST00000476391 C9orf85Q96MD7 179 aa10.13□□□□□ -0.79
HDAC1-206ENST00000476391 FAM218AQ96MZ4 157 aa10.13□□□□□ -0.79
HDAC1-206ENST00000476391 DMDP11532 3685 aa10.13□□□□□ -0.79
HDAC1-206ENST00000476391 POLEQ07864 2286 aa10.13□□□□□ -0.79
HDAC1-206ENST00000476391 LINC00336Q6ZUF6 198 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms