RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 FP248Q71RG6 208 aaPredicted RBP2.12□□□□□ -2.07
VPS13D-207ENST00000476169 Q8TAT8 98 aa2.12□□□□□ -2.07
VPS13D-207ENST00000476169 C4orf3Q8WVX3 66 aa2.12□□□□□ -2.07
VPS13D-207ENST00000476169 C12orf57Q99622 126 aa2.12□□□□□ -2.07
VPS13D-207ENST00000476169 TCEAL7Q9BRU2 100 aa2.12□□□□□ -2.07
VPS13D-207ENST00000476169 MPC1Q9Y5U8 109 aa2.12□□□□□ -2.07
VPS13D-207ENST00000476169 BDP1A6H8Y1 2624 aa2.12□□□□□ -2.07
VPS13D-207ENST00000476169 TANC2Q9HCD6 1990 aa2.12□□□□□ -2.07
VPS13D-207ENST00000476169 POLEQ07864 2286 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 TRBV6-8A0A0A6YYG3 113 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 SNAPC5O75971 98 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 AKAIN1P0CW23 69 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 OCIAD2Q56VL3 154 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 C1orf137Q5JT78 98 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 SNX29P2Q8IUI4 249 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 FAM19A2Q8N3H0 131 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.11□□□□□ -2.07
VPS13D-207ENST00000476169 SDF2Q99470 211 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 PDCD10Q9BUL8 212 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 REV3LO60673 3130 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 ZFHX4Q86UP3 3567 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 NCKAP5O14513 1909 aa2.11□□□□□ -2.07
VPS13D-207ENST00000476169 PTPRZ1P23471 2315 aaPredicted RBP2.11□□□□□ -2.07
VPS13D-207ENST00000476169 SDK2Q58EX2 2172 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 MIR22HGQ0VDD5 57 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 DEFB109BQ30KR1 87 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 ASB16-AS1Q495Z4 193 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 COA5Q86WW8 74 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 LINC00269Q8N2A0 174 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 C5orf17Q8NAS9 161 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 LCN9Q8WX39 176 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 PSMF1Q92530 271 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 NOP16Q9Y3C1 178 aaKnown RBP2.1□□□□□ -2.07
VPS13D-207ENST00000476169 CHCHD2Q9Y6H1 151 aaPredicted RBP2.1□□□□□ -2.07
VPS13D-207ENST00000476169 MYH6P13533 1939 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 PCDH15Q96QU1 1955 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 FANCMQ8IYD8 2048 aa2.1□□□□□ -2.07
VPS13D-207ENST00000476169 IFITM5A6NNB3 132 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 F8W1H4 67 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 FAM74A1Q5RGS3 127 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 MIC13Q5XKP0 118 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 SCIMPQ6UWF3 145 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 FOXI2Q6ZQN5 318 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 ZNF833PQ6ZTB9 187 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 SCN3BQ9NY72 215 aa2.09□□□□□ -2.07
VPS13D-207ENST00000476169 TRANK1O15050 2925 aa2.09□□□□□ -2.08
VPS13D-207ENST00000476169 USP34Q70CQ2 3546 aa2.09□□□□□ -2.08
VPS13D-207ENST00000476169 CACNA1EQ15878 2313 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 MPDZO75970 2070 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 CEP250Q9BV73 2442 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 RIF1Q5UIP0 2472 aaKnown RBP2.08□□□□□ -2.08
VPS13D-207ENST00000476169 ANK1P16157 1881 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 LOC100130705A0A1B0GUX0 176 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 H0YGG7 62 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 J3QRE1 110 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 HYPMO75409 117 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 KLF7O75840 302 aaPredicted RBP2.08□□□□□ -2.08
VPS13D-207ENST00000476169 HIST1H1DP16402 221 aaKnown RBP2.08□□□□□ -2.08
VPS13D-207ENST00000476169 FGF7P21781 194 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 Q6ZUT4 128 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 RPS27LQ71UM5 84 aaKnown RBP2.08□□□□□ -2.08
VPS13D-207ENST00000476169 COPS9Q8WXC6 57 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 TSLPQ969D9 159 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 DPH3Q96FX2 82 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 RERGLQ9H628 205 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 ORMDL1Q9P0S3 153 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 CACNA1AO00555 2505 aa2.08□□□□□ -2.08
VPS13D-207ENST00000476169 TRBV6-5A0A0K0K1A5 114 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 C20orf202A1L168 122 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 J3QLW9 94 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 M0R2P5 195 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 CORTO00230 105 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 KRTAP10-8P60410 259 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 CNBPP62633 177 aaKnown RBP2.07□□□□□ -2.08
VPS13D-207ENST00000476169 BTG2P78543 158 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 LINC01545Q5VT33 79 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 ATP11AUNQ6ZP68 121 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 ZCCHC23Q6ZST2 131 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 C3orf62Q6ZUJ4 267 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 FDCSPQ8NFU4 85 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 ATP6V0E2Q8NHE4 81 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 REG4Q9BYZ8 158 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 KLK9Q9UKQ9 250 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 MYO15AQ9UKN7 3530 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 FAM186AA6NE01 2351 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 SPTBN2O15020 2390 aa2.07□□□□□ -2.08
VPS13D-207ENST00000476169 MYH9P35579 1960 aaKnown RBP2.07□□□□□ -2.08
VPS13D-207ENST00000476169 C5orf42Q9H799 3197 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 MYO9BQ13459 2157 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 PATJQ8NI35 1801 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 DMDP11532 3685 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 PDCD11Q14690 1871 aaKnown RBP2.06□□□□□ -2.08
VPS13D-207ENST00000476169 TRAV12-2A0A075B6T6 113 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 A6NN06 94 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 H3BRM9 83 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 DCDP81605 110 aaKnown RBP2.06□□□□□ -2.08
VPS13D-207ENST00000476169 C10orf55Q5SWW7 151 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 IDO2Q6ZQW0 420 aa2.06□□□□□ -2.08
VPS13D-207ENST00000476169 OR10AG1Q8NH19 301 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms