RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 NPC2P61916 151 aa3.6□□□□□ -1.83
NPHP3-206ENST00000474871 FAM74A4Q5TZK3 123 aa3.6□□□□□ -1.83
NPHP3-206ENST00000474871 KLHL30-AS1Q8NEE0 82 aa3.6□□□□□ -1.83
NPHP3-206ENST00000474871 IGKV1D-8A0A087WSZ0 117 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 TRAV21A0A0B4J279 112 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 E7EQL1 145 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 HLA-DQA1P01909 254 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 MFAP2P55001 183 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 PRCDQ00LT1 54 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 SFTA2Q6UW10 78 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 VMO1Q7Z5L0 202 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 TRAV8-4A0A0B4J246 113 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 LINC01546A6NGU7 62 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 C9JCJ5 164 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 SLC25A20O43772 301 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 IGKV3-20P01619 116 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 IGLV3-1P01715 115 aa3.59□□□□□ -1.83
NPHP3-206ENST00000474871 TAF15Q92804 592 aaKnown RBP eCLIP3.59□□□□□ -1.83
NPHP3-206ENST00000474871 ZNF815PA8K554 130 aa3.59□□□□□ -1.84
NPHP3-206ENST00000474871 HOXA3O43365 443 aaPredicted RBP3.59□□□□□ -1.84
NPHP3-206ENST00000474871 DNAL4O96015 105 aa3.59□□□□□ -1.84
NPHP3-206ENST00000474871 NPYP01303 97 aa3.59□□□□□ -1.84
NPHP3-206ENST00000474871 LGALS3P17931 250 aaKnown RBP3.59□□□□□ -1.84
NPHP3-206ENST00000474871 REG3AQ06141 175 aa3.59□□□□□ -1.84
NPHP3-206ENST00000474871 FAM222AQ5U5X8 452 aa3.59□□□□□ -1.84
NPHP3-206ENST00000474871 NABP2Q9BQ15 211 aa3.59□□□□□ -1.84
NPHP3-206ENST00000474871 LYZL4Q96KX0 146 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 PLA2G2DQ9UNK4 145 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 ZFHX2Q9C0A1 2572 aaPredicted RBP3.58□□□□□ -1.84
NPHP3-206ENST00000474871 TMEM14DPA8MWL7 114 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 ATOX1O00244 68 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 NXT2Q9NPJ8 142 aaKnown RBP3.58□□□□□ -1.84
NPHP3-206ENST00000474871 RPL36AP83881 106 aaKnown RBP3.58□□□□□ -1.84
NPHP3-206ENST00000474871 ZNF497Q6ZNH5 498 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 NDUFA11Q86Y39 141 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 NRACQ8N912 160 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 OR8A1Q8NGG7 326 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 RPL36ALQ969Q0 106 aaKnown RBP3.58□□□□□ -1.84
NPHP3-206ENST00000474871 PCNX2A6NKB5 2137 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 IGKV3OR2-268A0A0C4DH90 116 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 INSP01308 110 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 CCL3L1P16619 93 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 PRR3P79522 188 aaKnown RBP3.58□□□□□ -1.84
NPHP3-206ENST00000474871 FAM104BQ5XKR9 115 aa3.58□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 SPINK4O60575 86 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 LEPROTL1O95214 131 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 RBM3P98179 157 aaKnown RBP3.57□□□□□ -1.84
NPHP3-206ENST00000474871 DEFB113Q30KQ7 82 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 NTN5Q8WTR8 489 aaPredicted RBP3.57□□□□□ -1.84
NPHP3-206ENST00000474871 LEAP2Q969E1 77 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 Q9H3A6 140 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV1-8P0DP01 117 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 DAD1P61803 113 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 ZNF414Q96IQ9 312 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 BSNQ9UPA5 3926 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 H3BVH4 76 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 IGKV1-5P01602 117 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 RNASE4P34096 147 aaKnown RBP3.57□□□□□ -1.84
NPHP3-206ENST00000474871 Q1T7F1 81 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 OTOGLQ3ZCN5 2332 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 DMXL1Q9Y485 3027 aa3.57□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV1-69DA0A0B4J2H0 117 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV1-69P01742 117 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 GYPEP15421 78 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 MRPS36P82909 103 aaKnown RBP3.56□□□□□ -1.84
NPHP3-206ENST00000474871 RPL39P5Q59GN2 51 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 FAM30AQ9NZY2 134 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 CCDC168Q8NDH2 2452 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV3OR16-13A0A075B7E8 117 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV3-74A0A0B4J1X5 117 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 LYNX1G3V0Z9 82 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 LYNX1P0DP58 116 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 Q6ZRP5 223 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 Q6ZVQ6 151 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 IL36RNQ9UBH0 155 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 SAA1P0DJI8 122 aaPredicted RBP3.56□□□□□ -1.84
NPHP3-206ENST00000474871 ZNF525Q8N782 197 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 C1orf147Q96MC9 270 aaPredicted RBP3.56□□□□□ -1.84
NPHP3-206ENST00000474871 PTPN13Q12923 2485 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 ZNF503-AS2A6NEH8 195 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 M0R381 172 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 CDK2AP2O75956 126 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 CD24P25063 80 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 IFI27P40305 119 aaPredicted RBP3.56□□□□□ -1.84
NPHP3-206ENST00000474871 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 TMEM170BQ5T4T1 132 aa3.56□□□□□ -1.84
NPHP3-206ENST00000474871 CELSR3Q9NYQ7 3312 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 IGLV3-9A0A075B6K5 115 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV3-49A0A0A0MS15 119 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 GPHB5Q86YW7 130 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 FREM3P0C091 2139 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 LAMA5O15230 3695 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 DOPEY1Q5JWR5 2465 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 IGHV1-3A0A0C4DH29 117 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 TIMM17BO60830 172 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 SAA2P0DJI9 122 aaPredicted RBP3.55□□□□□ -1.84
NPHP3-206ENST00000474871 C15orf32Q32M92 178 aa3.55□□□□□ -1.84
NPHP3-206ENST00000474871 C9orf66Q5T8R8 295 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms