RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 TMEM95Q3KNT9 176 aa12.15□□□□□ -0.46
TPR-205ENST00000474852 BEX4Q9NWD9 120 aaPredicted RBP12.15□□□□□ -0.46
TPR-205ENST00000474852 CSMD2Q7Z408 3487 aa12.15□□□□□ -0.47
TPR-205ENST00000474852 TRBV27A0A0K0K1C4 114 aa12.14□□□□□ -0.47
TPR-205ENST00000474852 Q1RN00 199 aa12.14□□□□□ -0.47
TPR-205ENST00000474852 SLC25A20O43772 301 aa12.14□□□□□ -0.47
TPR-205ENST00000474852 A0A0J9YXV3 536 aa12.13□□□□□ -0.47
TPR-205ENST00000474852 MUSTN1Q8IVN3 82 aa12.13□□□□□ -0.47
TPR-205ENST00000474852 USMG5Q96IX5 58 aa12.13□□□□□ -0.47
TPR-205ENST00000474852 ELANEP08246 267 aa12.13□□□□□ -0.47
TPR-205ENST00000474852 RPL32P62910 135 aaKnown RBP12.13□□□□□ -0.47
TPR-205ENST00000474852 Q8N1Y9 231 aa12.13□□□□□ -0.47
TPR-205ENST00000474852 M0QY20 66 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 P0DMU3 169 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 FAM231AP0DMU4 169 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 FAM231CP0DMU5 169 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 HTN1P15515 57 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 SPINK13Q1W4C9 94 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 SHISA2Q6UWI4 295 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 DCANP1Q8TF63 244 aa12.12□□□□□ -0.47
TPR-205ENST00000474852 IGHV3-73A0A0B4J1V6 119 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 TMEM223A0PJW6 202 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 LGALS9O00182 355 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 CRLF1O75462 422 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 IGHV3-33P01772 117 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 IGHV4-39P01824 125 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 IGHG2P01859 326 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 IGHV3-16A0A0C4DH30 117 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 ZNF22P17026 224 aaPredicted RBP12.11□□□□□ -0.47
TPR-205ENST00000474852 ID1P41134 155 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 NBL1P41271 181 aa12.11□□□□□ -0.47
TPR-205ENST00000474852 PRRC2AP48634 2157 aaKnown RBP12.1□□□□□ -0.47
TPR-205ENST00000474852 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
TPR-205ENST00000474852 TRBV7-9A0A0J9YWB2 115 aa12.1□□□□□ -0.47
TPR-205ENST00000474852 CCDC179H3BU77 68 aa12.1□□□□□ -0.47
TPR-205ENST00000474852 RNASE13Q5GAN3 156 aaKnown RBP12.1□□□□□ -0.47
TPR-205ENST00000474852 SPXQ9BT56 116 aa12.1□□□□□ -0.47
TPR-205ENST00000474852 IGHV4-61A0A0C4DH41 118 aa12.1□□□□□ -0.47
TPR-205ENST00000474852 SBSPONQ8IVN8 264 aa12.1□□□□□ -0.47
TPR-205ENST00000474852 CITED1Q99966 193 aa12.1□□□□□ -0.47
TPR-205ENST00000474852 RHODO00212 210 aa12.09□□□□□ -0.47
TPR-205ENST00000474852 LEPROTO15243 131 aa12.09□□□□□ -0.47
TPR-205ENST00000474852 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
TPR-205ENST00000474852 C19orf84I3L1E1 186 aa12.09□□□□□ -0.47
TPR-205ENST00000474852 CEMP1Q6PRD7 247 aaPredicted RBP12.09□□□□□ -0.47
TPR-205ENST00000474852 C10orf99Q6UWK7 81 aa12.09□□□□□ -0.47
TPR-205ENST00000474852 PRSS2P07478 247 aa12.08□□□□□ -0.48
TPR-205ENST00000474852 NPC2P61916 151 aa12.08□□□□□ -0.48
TPR-205ENST00000474852 VCX2Q9H322 139 aa12.08□□□□□ -0.48
TPR-205ENST00000474852 TRBV6-5A0A0K0K1A5 114 aa12.08□□□□□ -0.48
TPR-205ENST00000474852 NTN5Q8WTR8 489 aaPredicted RBP12.08□□□□□ -0.48
TPR-205ENST00000474852 ITPR1Q14643 2758 aa12.08□□□□□ -0.48
TPR-205ENST00000474852 TRAV8-3A0A0A6YYJ7 113 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 C20orf203Q8NBC4 194 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 C9orf85Q96MD7 179 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 ZANQ9Y493 2812 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 HERV-K104P63124 156 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 USP9YO00507 2555 aaPredicted RBP12.07□□□□□ -0.48
TPR-205ENST00000474852 IGLV4-3A0A075B6K6 122 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 NSUN5P1Q3KNT7 163 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 GAGE2EQ4V326 116 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 GAGE2DQ9UEU5 116 aa12.07□□□□□ -0.48
TPR-205ENST00000474852 LY6DQ14210 128 aa12.06□□□□□ -0.48
TPR-205ENST00000474852 SMIM20Q8N5G0 67 aa12.06□□□□□ -0.48
TPR-205ENST00000474852 DUX5Q96PT3 197 aa12.06□□□□□ -0.48
TPR-205ENST00000474852 NDUFV3P56181 108 aaKnown RBP12.06□□□□□ -0.48
TPR-205ENST00000474852 A0A0J9YXY3 114 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 A6NDX4 124 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 TMEM262E9PQX1 116 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 PROK1P58294 105 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 CFAP161Q6P656 301 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 IGHV1OR15-1A0A075B7D0 117 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 TEX49A0A1B0GTD5 131 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 A8MZ25 164 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 I3L3M4 83 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 RHOHQ15669 191 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 NACAE9PAV3 2078 aa12.05□□□□□ -0.48
TPR-205ENST00000474852 UTP20O75691 2785 aaKnown RBP12.05□□□□□ -0.48
TPR-205ENST00000474852 H3BUA1 57 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 IGLV1-40P01703 118 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 PRM2P04554 102 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 CD28P10747 220 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 Q6ZSV7 163 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 A0A0J9YX75 114 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 SNCGO76070 127 aa12.04□□□□□ -0.48
TPR-205ENST00000474852 A0A0B4J2C4 111 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 GAGE12JA6NER3 117 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 KNCNA6PVL3 124 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 TRIAP1O43715 76 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 GAGE7O76087 117 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 GAGE12FP0CL80 117 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 GAGE12GP0CL81 117 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 GAGE12IP0CL82 117 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 SNRPD3P62318 126 aaKnown RBP12.03□□□□□ -0.48
TPR-205ENST00000474852 GAGE4Q13068 117 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 LINC01620Q4KN68 170 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 TIMM21Q9BVV7 248 aa12.03□□□□□ -0.48
TPR-205ENST00000474852 CENPEQ02224 2701 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms