RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 CYP2G1PQ6ZSU1 146 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 FAM216BQ8N7L0 139 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 URB1-AS1Q96HZ7 61 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 CCL26Q9Y258 94 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 IGHV7-81A0A0B4J1V7 117 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 CRYM-AS1A6NIL9 109 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 RBM3P98179 157 aaKnown RBP4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 CHCHD2P9Q5T1J5 151 aaPredicted RBP4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 CEMP1Q6PRD7 247 aaPredicted RBP4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 PATE2Q6UY27 113 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 SOSTDC1Q6X4U4 206 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 NMES1Q9C002 83 aa4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 MYO5AQ9Y4I1 1855 aaKnown RBP4.39□□□□□ -1.71
SMARCE1-208ENST00000474246 MED12LQ86YW9 2145 aa4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 J3QLW9 94 aa4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 ZNF32P17041 273 aa4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 RPL18Q07020 188 aaKnown RBP4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 CLEC2BQ92478 149 aa4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 SND1-IT1Q9HBX3 110 aa4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 EML6Q6ZMW3 1958 aa4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 DNAH1Q9P2D7 4330 aa4.38□□□□□ -1.71
SMARCE1-208ENST00000474246 IGKV6-21A0A0C4DH24 114 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 SAA1P0DJI8 122 aaPredicted RBP4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 CRIP2P52943 208 aaPredicted RBP4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 RHOHQ15669 191 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 ZNF56Q15929 161 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 Q1T7F1 81 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 KIF26BQ2KJY2 2108 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 FAM72AQ5TYM5 149 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 Q6P435 159 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 PDPNQ86YL7 162 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 SLC50A1Q9BRV3 221 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 MRPL35Q9NZE8 188 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 DEC1Q9P2X7 70 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 FER1L5A0AVI2 2057 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 PIGBOS1A0A0B4J2F0 54 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 C2orf70A6NJV1 201 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 LEPROTO15243 131 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 CPSF4O95639 269 aaKnown RBP4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 SMIM11AP58511 58 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 KRTAP9-8Q9BYQ0 159 aa4.37□□□□□ -1.71
SMARCE1-208ENST00000474246 A0A087X002 238 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 BMPR1BO00238 502 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 HCRTO43612 131 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 IGHV3-48P01763 117 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 PIRTP0C851 137 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 MIR17HGQ75NE6 70 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 FAM104AQ969W3 186 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 LINC00474Q9P2X8 69 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 BCE1O60756 84 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 GCHFRP30047 84 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 FHL2Q14192 279 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 IL17AQ16552 155 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 ASB16-AS1Q495Z4 193 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 DEFB121Q5J5C9 76 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 CCL4L1Q8NHW4 92 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 LINC00597Q9H2U6 94 aa4.36□□□□□ -1.71
SMARCE1-208ENST00000474246 ANK3Q12955 4377 aaKnown RBP4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 IGLV5-52A0A0A0MRZ9 124 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 TCRBV4S1A1TA0A5B7 111 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 PRH1P02810 166 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 BGLAPP02818 100 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 IGHV4-34P06331 123 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 CHTF8P0CG12 524 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 NUP37Q8NFH4 326 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 NABP2Q9BQ15 211 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 CSAG2Q9Y5P2 127 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 EXPH5Q8NEV8 1989 aa4.35□□□□□ -1.71
SMARCE1-208ENST00000474246 IGHV3OR15-7A0A075B7D8 119 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 KRTAP16-1A8MUX0 517 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 LMO2P25791 158 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 DYNLRB1Q9NP97 96 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 CELA1Q9UNI1 258 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 ANAPC1Q9H1A4 1944 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 H7BZZ5 65 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 IL4P05112 153 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 COX7A1P24310 79 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 S100A7L2Q5SY68 101 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 NCBP2-AS2Q69YL0 99 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 MYO7BQ6PIF6 2116 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 CSNK1G2-AS1Q8NCQ2 148 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 ABRACLQ9P1F3 81 aa4.34□□□□□ -1.71
SMARCE1-208ENST00000474246 CNTRLQ7Z7A1 2325 aa4.34□□□□□ -1.72
SMARCE1-208ENST00000474246 IGKV1D-17A0A075B6S4 117 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 TRAV13-2A0A0B4J235 113 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 NPYP01303 97 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 PEBP1P30086 187 aaKnown RBP4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 NANOS3P60323 173 aaKnown RBP4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 KISS1Q15726 138 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 SDIM1Q6ZPB5 146 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 TRAV3A0A0B4J244 114 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 UBE2D3P61077 147 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 UBE2D2P62837 147 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 DYNLT1P63172 113 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 SSBP1Q04837 148 aaKnown RBP4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 ESRGQ1W209 222 aa4.33□□□□□ -1.72
SMARCE1-208ENST00000474246 SLC48A1Q6P1K1 146 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms