RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 TRBV6-8A0A0A6YYG3 113 aa7.45□□□□□ -1.22
CKS1B-206ENST00000474215 LYZL1Q6UWQ5 148 aa7.45□□□□□ -1.22
CKS1B-206ENST00000474215 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
CKS1B-206ENST00000474215 LYPD6BQ8NI32 183 aa7.45□□□□□ -1.22
CKS1B-206ENST00000474215 OCC1Q8TAD7 63 aa7.45□□□□□ -1.22
CKS1B-206ENST00000474215 CHCHD7Q9BUK0 85 aa7.45□□□□□ -1.22
CKS1B-206ENST00000474215 LRP1BQ9NZR2 4599 aa7.45□□□□□ -1.22
CKS1B-206ENST00000474215 ABCA13Q86UQ4 5058 aa7.45□□□□□ -1.22
CKS1B-206ENST00000474215 A0A1B0GVG6 124 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 TMEM250H0YL14 139 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 GCSHP23434 173 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 NKX2-5P52952 324 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-206ENST00000474215 KRTAP10-1P60331 282 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 ELOBQ15370 118 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 WDR73Q6P4I2 378 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 KCNIP4Q6PIL6 250 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 Q8N1X5 172 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 Q8N814 137 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 NTN5Q8WTR8 489 aaPredicted RBP7.44□□□□□ -1.22
CKS1B-206ENST00000474215 KLK12Q9UKR0 248 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 COX11Q9Y6N1 276 aa7.44□□□□□ -1.22
CKS1B-206ENST00000474215 IGLV5-52A0A0A0MRZ9 124 aa7.43□□□□□ -1.22
CKS1B-206ENST00000474215 TMEM262E9PQX1 116 aa7.43□□□□□ -1.22
CKS1B-206ENST00000474215 K7EN84 100 aa7.43□□□□□ -1.22
CKS1B-206ENST00000474215 M0QY20 66 aa7.43□□□□□ -1.22
CKS1B-206ENST00000474215 NTF3P20783 257 aa7.43□□□□□ -1.22
CKS1B-206ENST00000474215 TMEM97Q5BJF2 176 aa7.43□□□□□ -1.22
CKS1B-206ENST00000474215 RMI2Q96E14 147 aa7.43□□□□□ -1.22
CKS1B-206ENST00000474215 RNASE7Q9H1E1 156 aaKnown RBP7.43□□□□□ -1.22
CKS1B-206ENST00000474215 RPP21Q9H633 154 aaKnown RBP7.43□□□□□ -1.22
CKS1B-206ENST00000474215 H7C1H1 209 aa7.42□□□□□ -1.22
CKS1B-206ENST00000474215 MGPP08493 103 aa7.42□□□□□ -1.22
CKS1B-206ENST00000474215 TRGC1P0CF51 173 aa7.42□□□□□ -1.22
CKS1B-206ENST00000474215 XGP55808 180 aa7.42□□□□□ -1.22
CKS1B-206ENST00000474215 SUMO4Q6EEV6 95 aa7.42□□□□□ -1.22
CKS1B-206ENST00000474215 DNAJC30Q96LL9 226 aa7.42□□□□□ -1.22
CKS1B-206ENST00000474215 HSPG2P98160 4391 aa7.42□□□□□ -1.22
CKS1B-206ENST00000474215 DNAH5Q8TE73 4624 aa7.41□□□□□ -1.22
CKS1B-206ENST00000474215 CTRLP40313 264 aa7.41□□□□□ -1.22
CKS1B-206ENST00000474215 WFDC2Q14508 124 aa7.41□□□□□ -1.22
CKS1B-206ENST00000474215 NTM-AS1Q6ZSK4 140 aa7.41□□□□□ -1.22
CKS1B-206ENST00000474215 UBE2WQ96B02 151 aa7.41□□□□□ -1.22
CKS1B-206ENST00000474215 CHCHD5Q9BSY4 110 aa7.41□□□□□ -1.22
CKS1B-206ENST00000474215 EIF5A2Q9GZV4 153 aaKnown RBP7.41□□□□□ -1.22
CKS1B-206ENST00000474215 IGKV2D-24A0A075B6R9 120 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 LECT2O14960 151 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 CEBPGP53567 150 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 PKIAP61925 76 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 Q0VG73 95 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 TWIST1Q15672 202 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 RASL11AQ6T310 242 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 ATRAIDQ6UW56 229 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 BAALCQ8WXS3 180 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 CNFNQ9BYD5 112 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 DPH3P1Q9H4G8 78 aa7.4□□□□□ -1.22
CKS1B-206ENST00000474215 APOBP04114 4563 aaKnown RBP7.4□□□□□ -1.23
CKS1B-206ENST00000474215 TRBV25-1A0A075B6N4 114 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 GATCO43716 136 aaKnown RBP7.39□□□□□ -1.23
CKS1B-206ENST00000474215 NDUFS6O75380 124 aaKnown RBP7.39□□□□□ -1.23
CKS1B-206ENST00000474215 MPV17L2Q567V2 206 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 ENHOQ6UWT2 76 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 FAM231DQ6ZW35 169 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 C15orf54Q8N8G6 183 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 GTSF1Q8WW33 167 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 FAM210AQ96ND0 272 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 NIT2Q9NQR4 276 aa7.39□□□□□ -1.23
CKS1B-206ENST00000474215 IGHV1-24A0A0C4DH33 117 aa7.38□□□□□ -1.23
CKS1B-206ENST00000474215 A8MWL6 223 aa7.38□□□□□ -1.23
CKS1B-206ENST00000474215 ANGP03950 147 aaKnown RBP7.38□□□□□ -1.23
CKS1B-206ENST00000474215 IQCJQ1A5X6 159 aa7.38□□□□□ -1.23
CKS1B-206ENST00000474215 Q8N976 141 aa7.38□□□□□ -1.23
CKS1B-206ENST00000474215 SMIM7Q9BQ49 75 aa7.38□□□□□ -1.23
CKS1B-206ENST00000474215 TMEM70Q9BUB7 260 aa7.38□□□□□ -1.23
CKS1B-206ENST00000474215 CRPP02741 224 aa7.37□□□□□ -1.23
CKS1B-206ENST00000474215 SRP19P09132 144 aaKnown RBP7.37□□□□□ -1.23
CKS1B-206ENST00000474215 RBX1P62877 108 aa7.37□□□□□ -1.23
CKS1B-206ENST00000474215 GAGE6Q13070 117 aa7.37□□□□□ -1.23
CKS1B-206ENST00000474215 FRZBQ92765 325 aa7.37□□□□□ -1.23
CKS1B-206ENST00000474215 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-206ENST00000474215 ZNF727A8MUV8 499 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 EPM2AB3EWF7 344 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 FOXA3P55318 350 aaPredicted RBP7.36□□□□□ -1.23
CKS1B-206ENST00000474215 CT83Q5H943 113 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 SMIM15Q7Z3B0 74 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 LINC01551Q86U37 167 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 GATD1Q8NB37 220 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 PGLYRP4Q96LB8 373 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 C1orf43Q9BWL3 253 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
CKS1B-206ENST00000474215 MIAQ16674 131 aa7.35□□□□□ -1.23
CKS1B-206ENST00000474215 LINC00269Q8N2A0 174 aa7.35□□□□□ -1.23
CKS1B-206ENST00000474215 TMEM243Q9BU79 118 aa7.35□□□□□ -1.23
CKS1B-206ENST00000474215 TRAV26-2A0A0B4J265 109 aa7.34□□□□□ -1.23
CKS1B-206ENST00000474215 TEX261Q6UWH6 196 aa7.34□□□□□ -1.23
CKS1B-206ENST00000474215 DEFB104AQ8WTQ1 72 aa7.34□□□□□ -1.23
CKS1B-206ENST00000474215 TSKUQ8WUA8 353 aa7.34□□□□□ -1.23
CKS1B-206ENST00000474215 BORCS7Q96B45 105 aa7.34□□□□□ -1.23
CKS1B-206ENST00000474215 GFRA4Q9GZZ7 299 aa7.34□□□□□ -1.23
CKS1B-206ENST00000474215 OSTCQ9NRP0 149 aa7.34□□□□□ -1.23
CKS1B-206ENST00000474215 FAM30AQ9NZY2 134 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms