RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 TMEM136Q6ZRR5 245 aa7.13□□□□□ -1.27
CASC3-204ENST00000474190 CBLN2Q8IUK8 224 aa7.13□□□□□ -1.27
CASC3-204ENST00000474190 NRACQ8N912 160 aa7.13□□□□□ -1.27
CASC3-204ENST00000474190 C15orf53Q8NAA6 179 aa7.13□□□□□ -1.27
CASC3-204ENST00000474190 TGIF2-C20orf24A0A0A6YYL0 155 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 TRBV10-1A0A0K0K1A3 114 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 GAGE12JA6NER3 117 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 TCTAP57738 103 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 UBE2D3P61077 147 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 UBE2D2P62837 147 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 GAGE1Q13065 139 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 GAGE4Q13068 117 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 GAGE5Q13069 117 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 ZNF56Q15929 161 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 MRPL51Q4U2R6 128 aaKnown RBP7.12□□□□□ -1.27
CASC3-204ENST00000474190 GAGE13Q4V321 117 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 RPL39LQ96EH5 51 aaKnown RBP7.12□□□□□ -1.27
CASC3-204ENST00000474190 BTF3L4Q96K17 158 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 LINC00588Q9Y4M8 146 aa7.12□□□□□ -1.27
CASC3-204ENST00000474190 DNAH11Q96DT5 4516 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 TRBV24-1A0A075B6N3 115 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 TRAV9-1A0A075B6T8 112 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 A0A1B0GW15 77 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 NUDT3O95989 172 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 MGPP08493 103 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 LYPD5Q6UWN5 251 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 LINC00476Q8WZB0 136 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 ICOSQ9Y6W8 199 aa7.11□□□□□ -1.27
CASC3-204ENST00000474190 TRBV6-5A0A0K0K1A5 114 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 SCO1O75880 301 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 NCR2O95944 276 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 TIRAPP58753 221 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 MRPL23Q16540 153 aaKnown RBP7.1□□□□□ -1.27
CASC3-204ENST00000474190 RASL11AQ6T310 242 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 NTM-AS1Q6ZSK4 140 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 ZNRF2Q8NHG8 242 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 PRADC1Q9BSG0 188 aa7.1□□□□□ -1.27
CASC3-204ENST00000474190 TRBV7-3A0A075B6L6 115 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 F5H697 171 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 ATP6V1G1O75348 118 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 SMIM17P0DL12 118 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 LGALS9CQ6DKI2 356 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 NEGR1Q7Z3B1 354 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 BORCS7Q96B45 105 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 NIT2Q9NQR4 276 aa7.09□□□□□ -1.27
CASC3-204ENST00000474190 COLCA2A8K830 154 aa7.08□□□□□ -1.28
CASC3-204ENST00000474190 PHOX2AO14813 284 aa7.08□□□□□ -1.28
CASC3-204ENST00000474190 POLR2KP53803 58 aaKnown RBP7.08□□□□□ -1.28
CASC3-204ENST00000474190 KCNIP4Q6PIL6 250 aa7.08□□□□□ -1.28
CASC3-204ENST00000474190 FRZBQ92765 325 aa7.08□□□□□ -1.28
CASC3-204ENST00000474190 MRAP2Q96G30 205 aa7.08□□□□□ -1.28
CASC3-204ENST00000474190 UPK3BQ9BT76 320 aa7.08□□□□□ -1.28
CASC3-204ENST00000474190 IGLV2-18A0A075B6J9 118 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 IGHV3-38A0A0C4DH36 116 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 D6R8Y8 96 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 NPYP01303 97 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 SRIP30626 198 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 Q8N3U1 123 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 DNAJC30Q96LL9 226 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 GNB1LQ9BYB4 327 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 GTSF1LQ9H1H1 148 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 SMCO4Q9NRQ5 59 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 MRPS16Q9Y3D3 137 aaKnown RBP7.07□□□□□ -1.28
CASC3-204ENST00000474190 KIAA1109Q2LD37 5005 aa7.07□□□□□ -1.28
CASC3-204ENST00000474190 RPL36AP83881 106 aaKnown RBP7.06□□□□□ -1.28
CASC3-204ENST00000474190 SMIM15Q7Z3B0 74 aa7.06□□□□□ -1.28
CASC3-204ENST00000474190 DEFB104AQ8WTQ1 72 aa7.06□□□□□ -1.28
CASC3-204ENST00000474190 RPL36ALQ969Q0 106 aaKnown RBP7.06□□□□□ -1.28
CASC3-204ENST00000474190 TMEM70Q9BUB7 260 aa7.06□□□□□ -1.28
CASC3-204ENST00000474190 TRBV27A0A0K0K1C4 114 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 SDHAF1A6NFY7 115 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 TNFRSF6BO95407 300 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 S100A8P05109 93 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 S100PP25815 95 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 SH2D6Q7Z4S9 175 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 WFDC10BQ8IUB3 73 aa7.05□□□□□ -1.28
CASC3-204ENST00000474190 H7C1H1 209 aa7.04□□□□□ -1.28
CASC3-204ENST00000474190 TSHBP01222 138 aa7.04□□□□□ -1.28
CASC3-204ENST00000474190 RPL32P62910 135 aaKnown RBP7.04□□□□□ -1.28
CASC3-204ENST00000474190 OR10J3Q5JRS4 329 aa7.04□□□□□ -1.28
CASC3-204ENST00000474190 LELP1Q5T871 98 aa7.04□□□□□ -1.28
CASC3-204ENST00000474190 Q6ZR54 194 aa7.04□□□□□ -1.28
CASC3-204ENST00000474190 DAZ4Q86SG3 579 aaKnown RBP7.04□□□□□ -1.28
CASC3-204ENST00000474190 DAZ3Q9NR90 486 aaKnown RBP7.04□□□□□ -1.28
CASC3-204ENST00000474190 TRBV6-8A0A0A6YYG3 113 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 LY6G6CO95867 125 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 HLA-DQA1P01909 254 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 PPBPP02775 128 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 CKS2P33552 79 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 CCL18P55774 89 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 SUMO2P61956 95 aaKnown RBP7.03□□□□□ -1.28
CASC3-204ENST00000474190 IQCJQ1A5X6 159 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 PRELID3AQ96N28 172 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 C20orf78Q9BR46 151 aa7.03□□□□□ -1.28
CASC3-204ENST00000474190 ALKBH7Q9BT30 221 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms