RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 SPACA4Q8TDM5 124 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 RPL36ALQ969Q0 106 aaKnown RBP3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 RNF185Q96GF1 192 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 TPPP3Q9BW30 176 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 PRR34Q9NV39 138 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 HSPB11Q9Y547 144 aa3.24□□□□□ -1.89
SNRNP40-204ENST00000474025 A0A0J9YXV3 536 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 A0A1W2PPV4 95 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 B4DEV8 164 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 KRBOX1C9JBD0 128 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 PAGE4O60829 102 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 SLPIP03973 132 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 ARMS2P0C7Q2 107 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 STAG3L2P0CL84 134 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 STAG3L3P0CL85 134 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 SAPCD1Q5SSQ6 148 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 DNLZQ5SXM8 178 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 CLPSL2Q6UWE3 100 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 OR11H4Q8NGC9 324 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 OR10G8Q8NGN5 311 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 SCGB1C1Q8TD33 95 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 PPP1R1CQ8WVI7 109 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 SFRP2Q96HF1 295 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 SMIM3Q9BZL3 60 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 CTDSP1Q9GZU7 261 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 WFDC1Q9HC57 220 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 PLAC8Q9NZF1 115 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 EPDR1Q9UM22 224 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 KIF25-AS1Q9Y6Z4 181 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 ARL2-SNX15V9GYD0 113 aa3.23□□□□□ -1.89
SNRNP40-204ENST00000474025 IGHV3-64A0A075B6Q5 118 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 FAM240BA0A1B0GVZ2 78 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 FABP5P3A8MUU1 101 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 M0R036 132 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 M0R381 172 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 PTTG1O95997 202 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 S100A6P06703 90 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 GCHFRP30047 84 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 CDC34P49427 236 aaPredicted RBP3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 CAMPP49913 170 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 CRIP1P50238 77 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 H2BFSP57053 126 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 PKIAP61925 76 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 RBX1P62877 108 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 PRR3P79522 188 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 CYCSP99999 105 aaKnown RBP3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 NTM-AS1Q6ZSK4 140 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 Q86TA4 180 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 LINC00269Q8N2A0 174 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 NEXN-AS1Q8NBZ9 246 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 C7orf33Q8WU49 177 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 CHCHD5Q9BSY4 110 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 PHLDA3Q9Y5J5 127 aa3.22□□□□□ -1.89
SNRNP40-204ENST00000474025 IGLV10-54A0A075B6I4 117 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 hDV102S1A0JD36 115 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 GRIFINA4D1Z8 144 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 F8WDY8 70 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 SH2D1AO60880 128 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 MPC2O95563 127 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 RPL12P30050 165 aaKnown RBP3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 RAB4BP61018 213 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 PRR27Q6MZM9 219 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 COX8CQ7Z4L0 72 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 ZFP82Q8N141 532 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 DPH3Q96FX2 82 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 CCDC32Q9BV29 185 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 TMEM167BQ9NRX6 74 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 VAX2Q9UIW0 290 aa3.21□□□□□ -1.9
SNRNP40-204ENST00000474025 TMSB15BA0A087X1C1 80 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 A0A1W2PRE2 83 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 PEX7O00628 323 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 CXorf1O96002 111 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 PET100P0DJ07 73 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 TPT1P13693 172 aaKnown RBP3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 REG3AQ06141 175 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 GAGE6Q13070 117 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 FAM162BQ5T6X4 162 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 GTSF1Q8WW33 167 aa3.2□□□□□ -1.9
SNRNP40-204ENST00000474025 TRBV25-1A0A075B6N4 114 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 TRAV8-4A0A0B4J246 113 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 MUC21A0A0G2JKD1 596 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 TRBV6-1A0A0K0K1D8 114 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 IFNA7P01567 189 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 P01737 135 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 SUMO2P61956 95 aaKnown RBP3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 COX6A2Q02221 97 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 ZNF56Q15929 161 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 IQCJQ1A5X6 159 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 TMEM97Q5BJF2 176 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 REG3GQ6UW15 175 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 SPINK6Q6UWN8 80 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 LINC00469Q8N7U9 141 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 C15orf56Q8N910 161 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 C20orf203Q8NBC4 194 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 OR10AG1Q8NH19 301 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 PRSS3P2Q8NHM4 247 aa3.19□□□□□ -1.9
SNRNP40-204ENST00000474025 PSMG3Q9BT73 122 aaPredicted RBP3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms