RNA–Protein interactions for RNA: ENST00000473894.1

RAB4A-202, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4A, Length 708 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-202ENST00000473894 FAM231CP0DMU5 169 aa12.26□□□□□ -0.45
RAB4A-202ENST00000473894 LGALS9CQ6DKI2 356 aa12.26□□□□□ -0.45
RAB4A-202ENST00000473894 AMN1Q8IY45 258 aa12.26□□□□□ -0.45
RAB4A-202ENST00000473894 NEXN-AS1Q8NBZ9 246 aa12.26□□□□□ -0.45
RAB4A-202ENST00000473894 MRAP2Q96G30 205 aa12.26□□□□□ -0.45
RAB4A-202ENST00000473894 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
RAB4A-202ENST00000473894 RPL36AP83881 106 aaKnown RBP12.25□□□□□ -0.45
RAB4A-202ENST00000473894 RPL36ALQ969Q0 106 aaKnown RBP12.25□□□□□ -0.45
RAB4A-202ENST00000473894 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 LCE6AA0A183 80 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 UBE2D3P61077 147 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 UBE2D2P62837 147 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 YPEL4Q96NS1 127 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 LYSTQ99698 3801 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 NIT2Q9NQR4 276 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 URGCP-MRPS24S4R325 110 aa12.24□□□□□ -0.45
RAB4A-202ENST00000473894 TRBV24-1A0A075B6N3 115 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 GAGE12JA6NER3 117 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 GAGE1Q13065 139 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 GAGE4Q13068 117 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 GAGE5Q13069 117 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 ELOBQ15370 118 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 ESRGQ1W209 222 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 GAGE13Q4V321 117 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 LYPD5Q6UWN5 251 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 ZNRF2Q8NHG8 242 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 LINC00476Q8WZB0 136 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 ALMS1Q8TCU4 4167 aa12.23□□□□□ -0.45
RAB4A-202ENST00000473894 TRAV26-2A0A0B4J265 109 aa12.22□□□□□ -0.45
RAB4A-202ENST00000473894 CCL18P55774 89 aa12.22□□□□□ -0.45
RAB4A-202ENST00000473894 COX19Q49B96 90 aa12.22□□□□□ -0.45
RAB4A-202ENST00000473894 MRPL51Q4U2R6 128 aaKnown RBP12.22□□□□□ -0.45
RAB4A-202ENST00000473894 ATP6V0E2Q8NHE4 81 aa12.22□□□□□ -0.45
RAB4A-202ENST00000473894 TRBV6-5A0A0K0K1A5 114 aa12.21□□□□□ -0.45
RAB4A-202ENST00000473894 TMEM136Q6ZRR5 245 aa12.21□□□□□ -0.45
RAB4A-202ENST00000473894 UPK3BQ9BT76 320 aa12.21□□□□□ -0.45
RAB4A-202ENST00000473894 GTSF1LQ9H1H1 148 aa12.21□□□□□ -0.45
RAB4A-202ENST00000473894 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.45
RAB4A-202ENST00000473894 LINC00588Q9Y4M8 146 aa12.21□□□□□ -0.45
RAB4A-202ENST00000473894 PPP1R17O96001 155 aa12.2□□□□□ -0.46
RAB4A-202ENST00000473894 PPBPP02775 128 aa12.2□□□□□ -0.46
RAB4A-202ENST00000473894 DAZ4Q86SG3 579 aaKnown RBP12.2□□□□□ -0.46
RAB4A-202ENST00000473894 GNB1LQ9BYB4 327 aa12.2□□□□□ -0.46
RAB4A-202ENST00000473894 DAZ3Q9NR90 486 aaKnown RBP12.2□□□□□ -0.46
RAB4A-202ENST00000473894 MRPS16Q9Y3D3 137 aaKnown RBP12.2□□□□□ -0.46
RAB4A-202ENST00000473894 TNFRSF18Q9Y5U5 241 aa12.2□□□□□ -0.46
RAB4A-202ENST00000473894 GAS8-AS1O95177 125 aa12.19□□□□□ -0.46
RAB4A-202ENST00000473894 NRACQ8N912 160 aa12.19□□□□□ -0.46
RAB4A-202ENST00000473894 TGIF2-C20orf24A0A0A6YYL0 155 aa12.18□□□□□ -0.46
RAB4A-202ENST00000473894 HLA-DQA1P01909 254 aa12.18□□□□□ -0.46
RAB4A-202ENST00000473894 RPS10P46783 165 aaKnown RBP12.18□□□□□ -0.46
RAB4A-202ENST00000473894 RPL39LQ96EH5 51 aaKnown RBP12.18□□□□□ -0.46
RAB4A-202ENST00000473894 PHOX2AO14813 284 aa12.17□□□□□ -0.46
RAB4A-202ENST00000473894 MT-ND6P03923 174 aa12.17□□□□□ -0.46
RAB4A-202ENST00000473894 OR10J3Q5JRS4 329 aa12.17□□□□□ -0.46
RAB4A-202ENST00000473894 S100A1P23297 94 aa12.16□□□□□ -0.46
RAB4A-202ENST00000473894 CKS2P33552 79 aa12.16□□□□□ -0.46
RAB4A-202ENST00000473894 TMEM97Q5BJF2 176 aa12.16□□□□□ -0.46
RAB4A-202ENST00000473894 LELP1Q5T871 98 aa12.16□□□□□ -0.46
RAB4A-202ENST00000473894 CBLN2Q8IUK8 224 aa12.16□□□□□ -0.46
RAB4A-202ENST00000473894 D6R8Y8 96 aa12.15□□□□□ -0.46
RAB4A-202ENST00000473894 SMKR1H3BMG3 65 aa12.15□□□□□ -0.46
RAB4A-202ENST00000473894 NCR2O95944 276 aa12.15□□□□□ -0.46
RAB4A-202ENST00000473894 POLR2KP53803 58 aaKnown RBP12.15□□□□□ -0.46
RAB4A-202ENST00000473894 RPL32P62910 135 aaKnown RBP12.15□□□□□ -0.46
RAB4A-202ENST00000473894 ORMDL3Q8N138 153 aa12.15□□□□□ -0.46
RAB4A-202ENST00000473894 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
RAB4A-202ENST00000473894 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
RAB4A-202ENST00000473894 LAMTOR2Q9Y2Q5 125 aa12.15□□□□□ -0.46
RAB4A-202ENST00000473894 TRBV27A0A0K0K1C4 114 aa12.14□□□□□ -0.47
RAB4A-202ENST00000473894 SDHAF1A6NFY7 115 aa12.14□□□□□ -0.47
RAB4A-202ENST00000473894 ATP6V1G1O75348 118 aa12.14□□□□□ -0.47
RAB4A-202ENST00000473894 UBE2DNLQ8IWF7 75 aa12.14□□□□□ -0.47
RAB4A-202ENST00000473894 TMEM70Q9BUB7 260 aa12.14□□□□□ -0.47
RAB4A-202ENST00000473894 ST20Q9HBF5 79 aa12.14□□□□□ -0.47
RAB4A-202ENST00000473894 PRSS47A8MTI9 375 aa12.13□□□□□ -0.47
RAB4A-202ENST00000473894 TNFRSF6BO95407 300 aa12.13□□□□□ -0.47
RAB4A-202ENST00000473894 LY6G6CO95867 125 aa12.13□□□□□ -0.47
RAB4A-202ENST00000473894 SUMO2P61956 95 aaKnown RBP12.13□□□□□ -0.47
RAB4A-202ENST00000473894 NTM-AS1Q6ZSK4 140 aa12.13□□□□□ -0.47
RAB4A-202ENST00000473894 TRBV6-8A0A0A6YYG3 113 aa12.12□□□□□ -0.47
RAB4A-202ENST00000473894 APCSP02743 223 aa12.12□□□□□ -0.47
RAB4A-202ENST00000473894 DNAH6Q9C0G6 4158 aa12.11□□□□□ -0.47
RAB4A-202ENST00000473894 IGHV3-38A0A0C4DH36 116 aa12.11□□□□□ -0.47
RAB4A-202ENST00000473894 I3L3M4 83 aa12.11□□□□□ -0.47
RAB4A-202ENST00000473894 NPYP01303 97 aa12.11□□□□□ -0.47
RAB4A-202ENST00000473894 IQCJQ1A5X6 159 aa12.11□□□□□ -0.47
RAB4A-202ENST00000473894 PRELID3AQ96N28 172 aa12.11□□□□□ -0.47
RAB4A-202ENST00000473894 Q9H8V8 135 aa12.11□□□□□ -0.47
RAB4A-202ENST00000473894 TRAV8-6A0A0B4J262 113 aa12.1□□□□□ -0.47
RAB4A-202ENST00000473894 VCYO14598 125 aa12.1□□□□□ -0.47
RAB4A-202ENST00000473894 MRPL18Q9H0U6 180 aaKnown RBP12.1□□□□□ -0.47
RAB4A-202ENST00000473894 KMT2AQ03164 3969 aa12.1□□□□□ -0.47
RAB4A-202ENST00000473894 COLCA2A8K830 154 aa12.09□□□□□ -0.47
RAB4A-202ENST00000473894 SIVA1O15304 175 aa12.09□□□□□ -0.47
RAB4A-202ENST00000473894 DNAH10OSP0CZ25 163 aa12.09□□□□□ -0.47
RAB4A-202ENST00000473894 COTL1Q14019 142 aa12.09□□□□□ -0.47
RAB4A-202ENST00000473894 K7EP13 123 aa12.08□□□□□ -0.48
RAB4A-202ENST00000473894 WFDC10BQ8IUB3 73 aa12.08□□□□□ -0.48
RAB4A-202ENST00000473894 TRAPPC1Q9Y5R8 145 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms