RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 HCP5Q6MZN7 132 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 RNASE6Q93091 150 aaKnown RBP8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 PEMTQ9UBM1 199 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 PYGO1Q9Y3Y4 419 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 ICOSQ9Y6W8 199 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 NIPBLQ6KC79 2804 aaeCLIP8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 IGKV2-40A0A087WW87 121 aaPredicted RBP8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 TMEM178BH3BS89 294 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 J3QQQ9 107 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 IGKV1-17P01599 117 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 IGKV2D-40P01614 121 aaPredicted RBP8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 C14orf178Q8N769 122 aaPredicted RBP8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 FAM19A4Q96LR4 140 aa8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 RP1L1Q8IWN7 2480 aaPredicted RBP8.14□□□□□ -1.11
CHMP2B-203ENST00000471660 H7C2G1 150 aa8.13□□□□□ -1.11
CHMP2B-203ENST00000471660 MUSTN1Q8IVN3 82 aa8.13□□□□□ -1.11
CHMP2B-203ENST00000471660 DCANP1Q8TF63 244 aa8.13□□□□□ -1.11
CHMP2B-203ENST00000471660 TRAV26-2A0A0B4J265 109 aa8.13□□□□□ -1.11
CHMP2B-203ENST00000471660 SUMO2P61956 95 aaKnown RBP8.13□□□□□ -1.11
CHMP2B-203ENST00000471660 CFHR4Q92496 578 aa8.13□□□□□ -1.11
CHMP2B-203ENST00000471660 CYSTM1Q9H1C7 97 aa8.13□□□□□ -1.11
CHMP2B-203ENST00000471660 TRAV13-1A0A0B4J241 112 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 SDHAF1A6NFY7 115 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 I3L2K1 104 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 NDUFB3O43676 98 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 CCL8P80075 99 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 BSPH1Q075Z2 132 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 ZNF491Q8N8L2 437 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 KLK15Q9H2R5 256 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 CSPG4Q6UVK1 2322 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 TINCRA0A1B0GVN0 87 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 LGALS3P17931 250 aaKnown RBP8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 RNF125Q96EQ8 232 aa8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 PRRC2AP48634 2157 aaKnown RBP8.12□□□□□ -1.11
CHMP2B-203ENST00000471660 NDUFC2-KCTD14E9PQ53 114 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 RPL27AP46776 148 aaKnown RBP8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 SERP2Q8N6R1 65 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 LINC00477Q96M19 166 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 DSCR8Q96T75 97 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 POLEQ07864 2286 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 TRAV41A0A0B4J266 112 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 IGHV7-4-1A0A0J9YVY3 117 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 LY6LH3BQJ8 138 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 LEPROTO15243 131 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 Q8TAT8 98 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 RNF5Q99942 180 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 ZNRD1Q9P1U0 126 aa8.11□□□□□ -1.11
CHMP2B-203ENST00000471660 TRBV7-1A0A0A6YYK4 115 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 IGHV3-21A0A0B4J1V1 117 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 M0R381 172 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 TPSG1Q9NRR2 321 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 BEX4Q9NWD9 120 aaPredicted RBP8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 EPM2AB3EWF7 344 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 TMEM141Q96I45 108 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 DPH3P1Q9H4G8 78 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 DYNLRB1Q9NP97 96 aa8.1□□□□□ -1.11
CHMP2B-203ENST00000471660 IGKV3D-20A0A0C4DH25 116 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 IGIPA6NJ69 53 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 RNF223E7ERA6 249 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 TSHBP01222 138 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 PRB4P10163 310 aaPredicted RBP8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 DAND5Q8N907 189 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 PRR14LQ5THK1 2151 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 UBE2E1P51965 193 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 SEC61GP60059 68 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 CCL13Q99616 98 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 PKDREJQ9NTG1 2253 aa8.09□□□□□ -1.11
CHMP2B-203ENST00000471660 TEX22C9J3V5 150 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 RS1O15537 224 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 TIMM17AQ99595 171 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 TIMM21Q9BVV7 248 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 PPP1R17O96001 155 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 PSMB8P28062 276 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 PFN2P35080 140 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 DLX1P56177 255 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 ZNF876PQ49A33 203 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 DSCAMO60469 2012 aa8.08□□□□□ -1.12
CHMP2B-203ENST00000471660 E7EQL1 145 aa8.07□□□□□ -1.12
CHMP2B-203ENST00000471660 C19orf84I3L1E1 186 aa8.07□□□□□ -1.12
CHMP2B-203ENST00000471660 TMEM86BQ8N661 226 aa8.07□□□□□ -1.12
CHMP2B-203ENST00000471660 EEF1AKMT3Q96AZ1 226 aa8.07□□□□□ -1.12
CHMP2B-203ENST00000471660 C9orf85Q96MD7 179 aa8.07□□□□□ -1.12
CHMP2B-203ENST00000471660 TMEM200BQ69YZ2 307 aa8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 CLEC2BQ92478 149 aa8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 C11orf21Q9P2W6 132 aa8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 RAI1Q7Z5J4 1906 aaPredicted RBP8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 SPANXN1Q5VSR9 72 aa8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 LINC00336Q6ZUF6 198 aa8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 RNF152Q8N8N0 203 aa8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 C1orf43Q9BWL3 253 aa8.06□□□□□ -1.12
CHMP2B-203ENST00000471660 K7EIM0 57 aa8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 C22orf34Q6ZV56 151 aa8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 LITAFQ99732 161 aa8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 I3L3M4 83 aa8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 SPRY2O43597 315 aa8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 NDUFC2O95298 119 aa8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 RHOHQ15669 191 aa8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 NSD1Q96L73 2696 aaPredicted RBP8.05□□□□□ -1.12
CHMP2B-203ENST00000471660 A0A0J9YXY3 114 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms