RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 KCNIP4Q6PIL6 250 aa10.51□□□□□ -0.73
HDAC6-218ENST00000470942 NIT1Q86X76 327 aa10.51□□□□□ -0.73
HDAC6-218ENST00000470942 RPP21Q9H633 154 aaKnown RBP10.51□□□□□ -0.73
HDAC6-218ENST00000470942 A0A087WX48 190 aa10.5□□□□□ -0.73
HDAC6-218ENST00000470942 TRAV8-3A0A0A6YYJ7 113 aa10.5□□□□□ -0.73
HDAC6-218ENST00000470942 CDPF1Q6NVV7 123 aa10.5□□□□□ -0.73
HDAC6-218ENST00000470942 TM2D2Q9BX73 214 aa10.5□□□□□ -0.73
HDAC6-218ENST00000470942 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
HDAC6-218ENST00000470942 TRGC1P0CF51 173 aa10.49□□□□□ -0.73
HDAC6-218ENST00000470942 NTF3P20783 257 aa10.49□□□□□ -0.73
HDAC6-218ENST00000470942 TRBV6-8A0A0A6YYG3 113 aa10.48□□□□□ -0.73
HDAC6-218ENST00000470942 LRCOL1A6NCL2 159 aa10.48□□□□□ -0.73
HDAC6-218ENST00000470942 H7C1H1 209 aa10.48□□□□□ -0.73
HDAC6-218ENST00000470942 GATCO43716 136 aaKnown RBP10.48□□□□□ -0.73
HDAC6-218ENST00000470942 FAM210AQ96ND0 272 aa10.48□□□□□ -0.73
HDAC6-218ENST00000470942 KLK12Q9UKR0 248 aa10.48□□□□□ -0.73
HDAC6-218ENST00000470942 ELOBQ15370 118 aa10.47□□□□□ -0.73
HDAC6-218ENST00000470942 TWIST1Q15672 202 aa10.47□□□□□ -0.73
HDAC6-218ENST00000470942 SUMO4Q6EEV6 95 aa10.47□□□□□ -0.73
HDAC6-218ENST00000470942 WDR73Q6P4I2 378 aa10.47□□□□□ -0.73
HDAC6-218ENST00000470942 SMIM7Q9BQ49 75 aa10.47□□□□□ -0.73
HDAC6-218ENST00000470942 DPH3P1Q9H4G8 78 aa10.47□□□□□ -0.73
HDAC6-218ENST00000470942 M0QY20 66 aa10.46□□□□□ -0.73
HDAC6-218ENST00000470942 CTRLP40313 264 aa10.46□□□□□ -0.73
HDAC6-218ENST00000470942 TMEM97Q5BJF2 176 aa10.46□□□□□ -0.73
HDAC6-218ENST00000470942 RMI2Q96E14 147 aa10.46□□□□□ -0.73
HDAC6-218ENST00000470942 DNAJC30Q96LL9 226 aa10.46□□□□□ -0.73
HDAC6-218ENST00000470942 CHCHD5Q9BSY4 110 aa10.46□□□□□ -0.73
HDAC6-218ENST00000470942 CHCHD7Q9BUK0 85 aa10.46□□□□□ -0.73
HDAC6-218ENST00000470942 FAM231DQ6ZW35 169 aa10.45□□□□□ -0.74
HDAC6-218ENST00000470942 MAPKAPK5-AS1Q8N8E1 139 aa10.45□□□□□ -0.74
HDAC6-218ENST00000470942 UBE2WQ96B02 151 aa10.45□□□□□ -0.74
HDAC6-218ENST00000470942 APOBP04114 4563 aaKnown RBP10.45□□□□□ -0.74
HDAC6-218ENST00000470942 HSPG2P98160 4391 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 IGKV2D-24A0A075B6R9 120 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 IGLV5-52A0A0A0MRZ9 124 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 ZNF727A8MUV8 499 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 A8MWL6 223 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 NDUFS6O75380 124 aaKnown RBP10.44□□□□□ -0.74
HDAC6-218ENST00000470942 SRP19P09132 144 aaKnown RBP10.44□□□□□ -0.74
HDAC6-218ENST00000470942 RASL11AQ6T310 242 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 Q8N814 137 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 GTSF1Q8WW33 167 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 COX11Q9Y6N1 276 aa10.44□□□□□ -0.74
HDAC6-218ENST00000470942 GCSHP23434 173 aa10.43□□□□□ -0.74
HDAC6-218ENST00000470942 KRTAP10-1P60331 282 aa10.43□□□□□ -0.74
HDAC6-218ENST00000470942 PKIAP61925 76 aa10.43□□□□□ -0.74
HDAC6-218ENST00000470942 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
HDAC6-218ENST00000470942 SMIM15Q7Z3B0 74 aa10.43□□□□□ -0.74
HDAC6-218ENST00000470942 PGLYRP4Q96LB8 373 aa10.43□□□□□ -0.74
HDAC6-218ENST00000470942 CNFNQ9BYD5 112 aa10.43□□□□□ -0.74
HDAC6-218ENST00000470942 TRBV25-1A0A075B6N4 114 aa10.42□□□□□ -0.74
HDAC6-218ENST00000470942 LECT2O14960 151 aa10.42□□□□□ -0.74
HDAC6-218ENST00000470942 MPV17L2Q567V2 206 aa10.42□□□□□ -0.74
HDAC6-218ENST00000470942 LINC01551Q86U37 167 aa10.42□□□□□ -0.74
HDAC6-218ENST00000470942 C15orf54Q8N8G6 183 aa10.42□□□□□ -0.74
HDAC6-218ENST00000470942 NTN5Q8WTR8 489 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-218ENST00000470942 KRTAP17-1Q9BYP8 105 aa10.42□□□□□ -0.74
HDAC6-218ENST00000470942 NIT2Q9NQR4 276 aa10.42□□□□□ -0.74
HDAC6-218ENST00000470942 IGHV1-24A0A0C4DH33 117 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 CRPP02741 224 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 ANGP03950 147 aaKnown RBP10.41□□□□□ -0.74
HDAC6-218ENST00000470942 Q0VG73 95 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 GAGE6Q13070 117 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 WFDC2Q14508 124 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 ATRAIDQ6UW56 229 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 TEX261Q6UWH6 196 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 BAALCQ8WXS3 180 aa10.41□□□□□ -0.74
HDAC6-218ENST00000470942 CT83Q5H943 113 aa10.4□□□□□ -0.74
HDAC6-218ENST00000470942 Q8N976 141 aa10.4□□□□□ -0.74
HDAC6-218ENST00000470942 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
HDAC6-218ENST00000470942 KRTAP4-5Q9BYR2 181 aa10.4□□□□□ -0.74
HDAC6-218ENST00000470942 FOXA3P55318 350 aaPredicted RBP10.39□□□□□ -0.75
HDAC6-218ENST00000470942 IQCJQ1A5X6 159 aa10.39□□□□□ -0.75
HDAC6-218ENST00000470942 GATD1Q8NB37 220 aa10.39□□□□□ -0.75
HDAC6-218ENST00000470942 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
HDAC6-218ENST00000470942 OSTCQ9NRP0 149 aa10.39□□□□□ -0.75
HDAC6-218ENST00000470942 TRAV26-2A0A0B4J265 109 aa10.38□□□□□ -0.75
HDAC6-218ENST00000470942 PEA15Q15121 130 aa10.38□□□□□ -0.75
HDAC6-218ENST00000470942 TMEM241Q24JQ0 296 aa10.38□□□□□ -0.75
HDAC6-218ENST00000470942 ENHOQ6UWT2 76 aa10.38□□□□□ -0.75
HDAC6-218ENST00000470942 Q8N1X5 172 aa10.38□□□□□ -0.75
HDAC6-218ENST00000470942 TSKUQ8WUA8 353 aa10.38□□□□□ -0.75
HDAC6-218ENST00000470942 C1orf43Q9BWL3 253 aa10.38□□□□□ -0.75
HDAC6-218ENST00000470942 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.37□□□□□ -0.75
HDAC6-218ENST00000470942 RBX1P62877 108 aa10.37□□□□□ -0.75
HDAC6-218ENST00000470942 FAM74A3Q4VXF1 159 aa10.37□□□□□ -0.75
HDAC6-218ENST00000470942 FRZBQ92765 325 aa10.37□□□□□ -0.75
HDAC6-218ENST00000470942 TMEM243Q9BU79 118 aa10.37□□□□□ -0.75
HDAC6-218ENST00000470942 HIGD1CA8MV81 97 aa10.36□□□□□ -0.75
HDAC6-218ENST00000470942 C9JQL5 133 aa10.36□□□□□ -0.75
HDAC6-218ENST00000470942 XGP55808 180 aa10.36□□□□□ -0.75
HDAC6-218ENST00000470942 SRSF3P84103 164 aaKnown RBP10.36□□□□□ -0.75
HDAC6-218ENST00000470942 COTL1Q14019 142 aa10.36□□□□□ -0.75
HDAC6-218ENST00000470942 GFRA4Q9GZZ7 299 aa10.36□□□□□ -0.75
HDAC6-218ENST00000470942 PCLOQ9Y6V0 5065 aa10.35□□□□□ -0.75
HDAC6-218ENST00000470942 A0A1B0GUT8 65 aa10.35□□□□□ -0.75
HDAC6-218ENST00000470942 UBE2L6O14933 153 aa10.35□□□□□ -0.75
HDAC6-218ENST00000470942 AMTP48728 403 aa10.35□□□□□ -0.75
HDAC6-218ENST00000470942 RPL23P62829 140 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms