RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 LINC00612Q8N6U2 182 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 RNASE8Q8TDE3 154 aaKnown RBP8.43□□□□□ -1.06
HDAC6-217ENST00000469223 YPEL4Q96NS1 127 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 C20orf144Q9BQM9 153 aa8.43□□□□□ -1.06
HDAC6-217ENST00000469223 TRAV9-2A0A087WT02 112 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 A0A1B0GUT8 65 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 RAB4BP61018 213 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 HBBP68871 147 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 ZNF493Q6ZR52 646 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 SMIM15Q7Z3B0 74 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 FER1L6-AS1Q8NA97 138 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 NUP35Q8NFH5 326 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 TPPP3Q9BW30 176 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 GNB1LQ9BYB4 327 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 NAGKQ9UJ70 344 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 TRAPPC1Q9Y5R8 145 aa8.42□□□□□ -1.06
HDAC6-217ENST00000469223 MUC2Q02817 5179 aa8.41□□□□□ -1.06
HDAC6-217ENST00000469223 J3KRW8 73 aa8.41□□□□□ -1.06
HDAC6-217ENST00000469223 S100A6P06703 90 aa8.41□□□□□ -1.06
HDAC6-217ENST00000469223 ZNF80P51504 273 aaPredicted RBP8.41□□□□□ -1.06
HDAC6-217ENST00000469223 CACNG7P62955 275 aa8.41□□□□□ -1.06
HDAC6-217ENST00000469223 TMEM263Q8WUH6 116 aaKnown RBP8.41□□□□□ -1.06
HDAC6-217ENST00000469223 PGLYRP4Q96LB8 373 aa8.41□□□□□ -1.06
HDAC6-217ENST00000469223 TMA7Q9Y2S6 64 aaKnown RBP8.41□□□□□ -1.06
HDAC6-217ENST00000469223 TRGV11A0A075B6L2 103 aa8.4□□□□□ -1.06
HDAC6-217ENST00000469223 TMSB15BA0A087X1C1 80 aa8.4□□□□□ -1.06
HDAC6-217ENST00000469223 SNURFLB1AK76 121 aa8.4□□□□□ -1.06
HDAC6-217ENST00000469223 MRPL54Q6P161 138 aaKnown RBP8.4□□□□□ -1.06
HDAC6-217ENST00000469223 CTRLP40313 264 aa8.39□□□□□ -1.07
HDAC6-217ENST00000469223 GFI1BQ5VTD9 330 aa8.39□□□□□ -1.07
HDAC6-217ENST00000469223 WFDC10BQ8IUB3 73 aa8.39□□□□□ -1.07
HDAC6-217ENST00000469223 ICOSQ9Y6W8 199 aa8.39□□□□□ -1.07
HDAC6-217ENST00000469223 LPAP08519 4548 aa8.39□□□□□ -1.07
HDAC6-217ENST00000469223 TRAV12-3A0A0B4J271 114 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 SPINK4O60575 86 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 TRGC2P03986 189 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 OR5AL1P0C617 328 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 EVI2AP22794 236 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 TDRG1Q3Y452 100 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 SPANXN1Q5VSR9 72 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 GTSF1Q8WW33 167 aa8.38□□□□□ -1.07
HDAC6-217ENST00000469223 IGHV1OR15-1A0A075B7D0 117 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 IGKV3D-20A0A0C4DH25 116 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 APCSP02743 223 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 CRYGDP07320 174 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 TRGC1P0CF51 173 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 IGLC6P0CF74 106 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 GZMBP10144 247 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 CAMPP49913 170 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 TWIST1Q15672 202 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 ANXA2RQ3ZCQ2 193 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 LINC01620Q4KN68 170 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 DNLZQ5SXM8 178 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 LYZL1Q6UWQ5 148 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 MRPL18Q9H0U6 180 aaKnown RBP8.37□□□□□ -1.07
HDAC6-217ENST00000469223 PHLDA3Q9Y5J5 127 aa8.37□□□□□ -1.07
HDAC6-217ENST00000469223 GRIFINA4D1Z8 144 aa8.36□□□□□ -1.07
HDAC6-217ENST00000469223 RPL37AP61513 92 aaKnown RBP8.36□□□□□ -1.07
HDAC6-217ENST00000469223 MUC21Q5SSG8 566 aa8.36□□□□□ -1.07
HDAC6-217ENST00000469223 PRR9Q5T870 116 aa8.36□□□□□ -1.07
HDAC6-217ENST00000469223 LELP1Q5T871 98 aa8.36□□□□□ -1.07
HDAC6-217ENST00000469223 Q6ZTI0 123 aa8.36□□□□□ -1.07
HDAC6-217ENST00000469223 CNFNQ9BYD5 112 aa8.36□□□□□ -1.07
HDAC6-217ENST00000469223 A0A1B0GXF2 115 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 K7EP13 123 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 SNAI2O43623 268 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 ZNF324O75467 553 aaPredicted RBP8.35□□□□□ -1.07
HDAC6-217ENST00000469223 ARMS2P0C7Q2 107 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 WFDC2Q14508 124 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 LYPD5Q6UWN5 251 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 ZFP82Q8N141 532 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 CIRBP-AS1Q8TBR5 109 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 CHAC1Q9BUX1 264 aa8.35□□□□□ -1.07
HDAC6-217ENST00000469223 H3BVH4 76 aa8.34□□□□□ -1.07
HDAC6-217ENST00000469223 SMIM17P0DL12 118 aa8.34□□□□□ -1.07
HDAC6-217ENST00000469223 ZNF415Q09FC8 603 aa8.34□□□□□ -1.07
HDAC6-217ENST00000469223 C10orf126Q8N4M7 172 aa8.34□□□□□ -1.07
HDAC6-217ENST00000469223 SSBP4Q9BWG4 385 aaPredicted RBP8.34□□□□□ -1.07
HDAC6-217ENST00000469223 PAX4O43316 350 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 NTF3P20783 257 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 ODF1Q14990 250 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 GATD1Q8NB37 220 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 AP1S3Q96PC3 154 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 TMEM191AQ9H0A3 160 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 Q9HAA7 133 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 C11orf21Q9P2W6 132 aa8.33□□□□□ -1.08
HDAC6-217ENST00000469223 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.32□□□□□ -1.08
HDAC6-217ENST00000469223 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
HDAC6-217ENST00000469223 PPBPP02775 128 aa8.32□□□□□ -1.08
HDAC6-217ENST00000469223 DAZ2Q13117 558 aaKnown RBP8.32□□□□□ -1.08
HDAC6-217ENST00000469223 SPXQ9BT56 116 aa8.32□□□□□ -1.08
HDAC6-217ENST00000469223 M0R381 172 aa8.31□□□□□ -1.08
HDAC6-217ENST00000469223 OR10J3Q5JRS4 329 aa8.31□□□□□ -1.08
HDAC6-217ENST00000469223 PIK3CD-AS1Q5SR53 167 aa8.31□□□□□ -1.08
HDAC6-217ENST00000469223 IGHV3-16A0A0C4DH30 117 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 LECT2O14960 151 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 GNRH2O43555 120 aa8.3□□□□□ -1.08
HDAC6-217ENST00000469223 HIST1H2BKO60814 126 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms