RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 DERL1Q9BUN8 251 aa15.94■□□□□ 0.14
PTCH1-210ENST00000468211 CHAC1Q9BUX1 264 aa15.94■□□□□ 0.14
PTCH1-210ENST00000468211 A0A0D9SG52 128 aa15.93■□□□□ 0.14
PTCH1-210ENST00000468211 F5H697 171 aa15.93■□□□□ 0.14
PTCH1-210ENST00000468211 RPL35P42766 123 aaKnown RBP15.93■□□□□ 0.14
PTCH1-210ENST00000468211 KRTAP10-4P60372 401 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-210ENST00000468211 C1orf43Q9BWL3 253 aa15.93■□□□□ 0.14
PTCH1-210ENST00000468211 KANTRA0A1W2PQU2 76 aa15.92■□□□□ 0.14
PTCH1-210ENST00000468211 CIRBP-AS1Q8TBR5 109 aa15.92■□□□□ 0.14
PTCH1-210ENST00000468211 CHCHD5Q9BSY4 110 aa15.92■□□□□ 0.14
PTCH1-210ENST00000468211 ANGP03950 147 aaKnown RBP15.91■□□□□ 0.14
PTCH1-210ENST00000468211 CRPP02741 224 aa15.9■□□□□ 0.14
PTCH1-210ENST00000468211 GZMBP10144 247 aa15.9■□□□□ 0.14
PTCH1-210ENST00000468211 VAX2Q9UIW0 290 aa15.9■□□□□ 0.14
PTCH1-210ENST00000468211 LRP1Q07954 4544 aaKnown RBP15.9■□□□□ 0.14
PTCH1-210ENST00000468211 DEFB104AQ8WTQ1 72 aa15.89■□□□□ 0.13
PTCH1-210ENST00000468211 C11orf52Q96A22 123 aa15.89■□□□□ 0.13
PTCH1-210ENST00000468211 KRTAP29-1A8MX34 341 aaPredicted RBP15.88■□□□□ 0.13
PTCH1-210ENST00000468211 GNG13Q9P2W3 67 aa15.88■□□□□ 0.13
PTCH1-210ENST00000468211 USP17L23D6RBM5 183 aa15.87■□□□□ 0.13
PTCH1-210ENST00000468211 IGLV2-8P01709 118 aa15.87■□□□□ 0.13
PTCH1-210ENST00000468211 GAGE6Q13070 117 aa15.87■□□□□ 0.13
PTCH1-210ENST00000468211 CLPSL2Q6UWE3 100 aa15.87■□□□□ 0.13
PTCH1-210ENST00000468211 AP1S3Q96PC3 154 aa15.87■□□□□ 0.13
PTCH1-210ENST00000468211 HLA-DQA1P01909 254 aa15.86■□□□□ 0.13
PTCH1-210ENST00000468211 IGLC6P0CF74 106 aa15.86■□□□□ 0.13
PTCH1-210ENST00000468211 RBX1P62877 108 aa15.86■□□□□ 0.13
PTCH1-210ENST00000468211 C14orf177Q52M58 125 aa15.86■□□□□ 0.13
PTCH1-210ENST00000468211 CENPWQ5EE01 88 aa15.86■□□□□ 0.13
PTCH1-210ENST00000468211 KRTAP26-1Q6PEX3 210 aa15.86■□□□□ 0.13
PTCH1-210ENST00000468211 PRSS1P07477 247 aa15.85■□□□□ 0.13
PTCH1-210ENST00000468211 SMIM17P0DL12 118 aa15.85■□□□□ 0.13
PTCH1-210ENST00000468211 MIAQ16674 131 aa15.85■□□□□ 0.13
PTCH1-210ENST00000468211 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.85■□□□□ 0.13
PTCH1-210ENST00000468211 TPPP3Q9BW30 176 aa15.85■□□□□ 0.13
PTCH1-210ENST00000468211 MANBALQ9NQG1 85 aa15.85■□□□□ 0.13
PTCH1-210ENST00000468211 PRR34Q9NV39 138 aa15.85■□□□□ 0.13
PTCH1-210ENST00000468211 RAB19A4D1S5 217 aa15.84■□□□□ 0.13
PTCH1-210ENST00000468211 M0QY20 66 aa15.84■□□□□ 0.13
PTCH1-210ENST00000468211 EIF5AP63241 154 aaKnown RBP15.84■□□□□ 0.13
PTCH1-210ENST00000468211 LINC00269Q8N2A0 174 aa15.84■□□□□ 0.13
PTCH1-210ENST00000468211 TRAV1-1A0A0B4J248 108 aa15.83■□□□□ 0.12
PTCH1-210ENST00000468211 C19orf71A6NCJ1 209 aa15.83■□□□□ 0.12
PTCH1-210ENST00000468211 MGPP08493 103 aa15.83■□□□□ 0.12
PTCH1-210ENST00000468211 TMEM97Q5BJF2 176 aa15.83■□□□□ 0.12
PTCH1-210ENST00000468211 PKIAP61925 76 aa15.82■□□□□ 0.12
PTCH1-210ENST00000468211 SUMO4Q6EEV6 95 aa15.82■□□□□ 0.12
PTCH1-210ENST00000468211 FER1L6-AS1Q8NA97 138 aa15.82■□□□□ 0.12
PTCH1-210ENST00000468211 OR2D3Q8NGH3 330 aa15.82■□□□□ 0.12
PTCH1-210ENST00000468211 FAT3Q8TDW7 4589 aa15.82■□□□□ 0.12
PTCH1-210ENST00000468211 TRBV25-1A0A075B6N4 114 aa15.81■□□□□ 0.12
PTCH1-210ENST00000468211 IQCJQ1A5X6 159 aa15.81■□□□□ 0.12
PTCH1-210ENST00000468211 PKHD1L1Q86WI1 4243 aa15.81■□□□□ 0.12
PTCH1-210ENST00000468211 TRBV20OR9-2A0A075B6H5 130 aa15.79■□□□□ 0.12
PTCH1-210ENST00000468211 DAZAP1Q96EP5 407 aaKnown RBP15.79■□□□□ 0.12
PTCH1-210ENST00000468211 IGHV1-24A0A0C4DH33 117 aa15.78■□□□□ 0.12
PTCH1-210ENST00000468211 RPS20P60866 119 aaKnown RBP15.78■□□□□ 0.12
PTCH1-210ENST00000468211 GNG4P50150 75 aa15.77■□□□□ 0.12
PTCH1-210ENST00000468211 NKX2-5P52952 324 aaPredicted RBP15.77■□□□□ 0.12
PTCH1-210ENST00000468211 C9orf163Q8N9P6 203 aa15.77■□□□□ 0.12
PTCH1-210ENST00000468211 IGLV10-54A0A075B6I4 117 aa15.76■□□□□ 0.11
PTCH1-210ENST00000468211 PANO1I0J062 215 aa15.76■□□□□ 0.11
PTCH1-210ENST00000468211 RAB5CP51148 216 aa15.76■□□□□ 0.11
PTCH1-210ENST00000468211 CACNG7P62955 275 aa15.76■□□□□ 0.11
PTCH1-210ENST00000468211 DGAT2L7PQ6IED9 249 aa15.76■□□□□ 0.11
PTCH1-210ENST00000468211 C20orf203Q8NBC4 194 aa15.76■□□□□ 0.11
PTCH1-210ENST00000468211 GFRA4Q9GZZ7 299 aa15.76■□□□□ 0.11
PTCH1-210ENST00000468211 H7C1H1 209 aa15.75■□□□□ 0.11
PTCH1-210ENST00000468211 SULT1A2P50226 295 aa15.75■□□□□ 0.11
PTCH1-210ENST00000468211 MEF2BQ02080 365 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-210ENST00000468211 REG3AQ06141 175 aa15.75■□□□□ 0.11
PTCH1-210ENST00000468211 LYZL1Q6UWQ5 148 aa15.75■□□□□ 0.11
PTCH1-210ENST00000468211 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.75■□□□□ 0.11
PTCH1-210ENST00000468211 IGLV4-60A0A075B6I1 120 aa15.74■□□□□ 0.11
PTCH1-210ENST00000468211 P01737 135 aa15.74■□□□□ 0.11
PTCH1-210ENST00000468211 RASL11AQ6T310 242 aa15.74■□□□□ 0.11
PTCH1-210ENST00000468211 SMIM12Q96EX1 92 aa15.74■□□□□ 0.11
PTCH1-210ENST00000468211 MED9Q9NWA0 146 aa15.73■□□□□ 0.11
PTCH1-210ENST00000468211 F2Z2F3 143 aa15.72■□□□□ 0.11
PTCH1-210ENST00000468211 PDE6DO43924 150 aa15.72■□□□□ 0.11
PTCH1-210ENST00000468211 IFNA1P01562 189 aa15.72■□□□□ 0.11
PTCH1-210ENST00000468211 NTF3P20783 257 aa15.72■□□□□ 0.11
PTCH1-210ENST00000468211 HNRNPA3P51991 378 aaKnown RBP15.72■□□□□ 0.11
PTCH1-210ENST00000468211 SDIM1Q6ZPB5 146 aa15.72■□□□□ 0.11
PTCH1-210ENST00000468211 TMEM243Q9BU79 118 aa15.72■□□□□ 0.11
PTCH1-210ENST00000468211 TEX46H3BTG2 121 aa15.71■□□□□ 0.11
PTCH1-210ENST00000468211 EIF5AL1Q6IS14 154 aaKnown RBP15.71■□□□□ 0.11
PTCH1-210ENST00000468211 TRGC1P0CF51 173 aa15.7■□□□□ 0.1
PTCH1-210ENST00000468211 BCL2P10415 239 aa15.7■□□□□ 0.1
PTCH1-210ENST00000468211 RPL37AP61513 92 aaKnown RBP15.7■□□□□ 0.1
PTCH1-210ENST00000468211 NUDT10Q8NFP7 164 aa15.7■□□□□ 0.1
PTCH1-210ENST00000468211 NUDT11Q96G61 164 aa15.7■□□□□ 0.1
PTCH1-210ENST00000468211 DPH3P1Q9H4G8 78 aa15.7■□□□□ 0.1
PTCH1-210ENST00000468211 NIT2Q9NQR4 276 aa15.7■□□□□ 0.1
PTCH1-210ENST00000468211 A0A1B0GUV1 79 aa15.69■□□□□ 0.1
PTCH1-210ENST00000468211 XKRY2A2RUG3 117 aa15.69■□□□□ 0.1
PTCH1-210ENST00000468211 C9orf62Q8N4C0 152 aa15.69■□□□□ 0.1
PTCH1-210ENST00000468211 OXTP01178 125 aa15.68■□□□□ 0.1
PTCH1-210ENST00000468211 CTRLP40313 264 aa15.68■□□□□ 0.1
PTCH1-210ENST00000468211 PGLYRP4Q96LB8 373 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 117.5 ms