RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 LINC01547P58512 204 aaPredicted RBP6.16□□□□□ -1.42
HDAC3-203ENST00000467533 RAB4BP61018 213 aa6.16□□□□□ -1.42
HDAC3-203ENST00000467533 SRSF3P84103 164 aaKnown RBP6.16□□□□□ -1.42
HDAC3-203ENST00000467533 MZT2BQ6NZ67 158 aa6.16□□□□□ -1.42
HDAC3-203ENST00000467533 ZFP82Q8N141 532 aa6.16□□□□□ -1.42
HDAC3-203ENST00000467533 OR5C1Q8NGR4 320 aa6.16□□□□□ -1.42
HDAC3-203ENST00000467533 WDR61Q9GZS3 305 aaKnown RBP6.16□□□□□ -1.42
HDAC3-203ENST00000467533 IGLV4-60A0A075B6I1 120 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 GVQW2A0A096LPI5 108 aaPredicted RBP6.15□□□□□ -1.42
HDAC3-203ENST00000467533 IGHV1-24A0A0C4DH33 117 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 TRBV6-1A0A0K0K1D8 114 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 H0Y9J4 135 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 M0R036 132 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 TSPAN13O95857 204 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 RPL13AP40429 203 aaKnown RBP6.15□□□□□ -1.42
HDAC3-203ENST00000467533 SAPCD1Q5SSQ6 148 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 C5orf17Q8NAS9 161 aa6.15□□□□□ -1.42
HDAC3-203ENST00000467533 FABP5P3A8MUU1 101 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 BTCP35070 178 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 CYCSP99999 105 aaKnown RBP6.14□□□□□ -1.43
HDAC3-203ENST00000467533 NHLH2Q02577 135 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 RAB32Q13637 225 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 IQCJQ1A5X6 159 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 RGS21Q2M5E4 152 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 PRR27Q6MZM9 219 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 CARD19Q96LW7 228 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 AQP10Q96PS8 301 aa6.14□□□□□ -1.43
HDAC3-203ENST00000467533 TRAV6A0A075B6T7 132 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 IGKV3OR2-268A0A0C4DH90 116 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 FAM240BA0A1B0GVZ2 78 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 KRBOX1C9JBD0 128 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 IGLV7-43P04211 117 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 AMTP48728 403 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 DNLZQ5SXM8 178 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 PQLC2Q6ZP29 291 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 CDIP1Q9H305 208 aa6.13□□□□□ -1.43
HDAC3-203ENST00000467533 HMGB3O15347 200 aaKnown RBP6.12□□□□□ -1.43
HDAC3-203ENST00000467533 KRTAP1-4P0C5Y4 121 aa6.12□□□□□ -1.43
HDAC3-203ENST00000467533 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
HDAC3-203ENST00000467533 GAGE2BQ13066 116 aa6.12□□□□□ -1.43
HDAC3-203ENST00000467533 ENKURQ8TC29 256 aa6.12□□□□□ -1.43
HDAC3-203ENST00000467533 MUC17Q685J3 4493 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 TMSB15BA0A087X1C1 80 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 A0A1B0GUV1 79 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 A0A1W2PNN7 141 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 A0A1W2PPV4 95 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 KRTAP9-7A8MTY7 169 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 F5H697 171 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 EIF5AP63241 154 aaKnown RBP6.11□□□□□ -1.43
HDAC3-203ENST00000467533 PHF5AQ7RTV0 110 aaKnown RBP6.11□□□□□ -1.43
HDAC3-203ENST00000467533 TMEM243Q9BU79 118 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 ARL2-SNX15V9GYD0 113 aa6.11□□□□□ -1.43
HDAC3-203ENST00000467533 UBE2L6O14933 153 aa6.1□□□□□ -1.43
HDAC3-203ENST00000467533 ZNF674Q2M3X9 581 aa6.1□□□□□ -1.43
HDAC3-203ENST00000467533 LINC00526Q96FQ7 95 aa6.1□□□□□ -1.43
HDAC3-203ENST00000467533 MARVELD1Q9BSK0 173 aa6.1□□□□□ -1.43
HDAC3-203ENST00000467533 NUDT15Q9NV35 164 aa6.1□□□□□ -1.43
HDAC3-203ENST00000467533 TRAV34A0A0B4J273 112 aa6.09□□□□□ -1.43
HDAC3-203ENST00000467533 LOC107984640A0A0U1RRK4 108 aa6.09□□□□□ -1.43
HDAC3-203ENST00000467533 INMT-MINDY4F8WBC2 141 aa6.09□□□□□ -1.43
HDAC3-203ENST00000467533 SH2D1AO60880 128 aa6.09□□□□□ -1.43
HDAC3-203ENST00000467533 H2AFB2P0C5Z0 115 aa6.09□□□□□ -1.43
HDAC3-203ENST00000467533 ARL14EPLP0DKL9 152 aa6.09□□□□□ -1.43
HDAC3-203ENST00000467533 CHCHD10Q8WYQ3 142 aaPredicted RBP6.09□□□□□ -1.43
HDAC3-203ENST00000467533 EPDR1Q9UM22 224 aa6.09□□□□□ -1.43
HDAC3-203ENST00000467533 SUMO1P63165 101 aaKnown RBP6.08□□□□□ -1.44
HDAC3-203ENST00000467533 SYCNQ0VAF6 134 aa6.08□□□□□ -1.44
HDAC3-203ENST00000467533 C9orf116Q5BN46 136 aaPredicted RBP6.08□□□□□ -1.44
HDAC3-203ENST00000467533 Q86TA4 180 aa6.08□□□□□ -1.44
HDAC3-203ENST00000467533 MLST8Q9BVC4 326 aa6.08□□□□□ -1.44
HDAC3-203ENST00000467533 A0A087WZ39 114 aa6.07□□□□□ -1.44
HDAC3-203ENST00000467533 CRIP1P50238 77 aa6.07□□□□□ -1.44
HDAC3-203ENST00000467533 Q6ZNX1 250 aa6.07□□□□□ -1.44
HDAC3-203ENST00000467533 SCGB1C1Q8TD33 95 aa6.07□□□□□ -1.44
HDAC3-203ENST00000467533 SEC22CQ9BRL7 303 aa6.07□□□□□ -1.44
HDAC3-203ENST00000467533 IGHV1-58A0A0C4DH39 117 aa6.06□□□□□ -1.44
HDAC3-203ENST00000467533 BCL2P10415 239 aa6.06□□□□□ -1.44
HDAC3-203ENST00000467533 IL15RAQ13261 267 aa6.06□□□□□ -1.44
HDAC3-203ENST00000467533 LINC01559Q495D7 138 aa6.06□□□□□ -1.44
HDAC3-203ENST00000467533 FAM162BQ5T6X4 162 aa6.06□□□□□ -1.44
HDAC3-203ENST00000467533 OR10AG1Q8NH19 301 aa6.06□□□□□ -1.44
HDAC3-203ENST00000467533 RETNLBQ9BQ08 111 aa6.06□□□□□ -1.44
HDAC3-203ENST00000467533 ZNF471Q9BX82 626 aaPredicted RBP6.06□□□□□ -1.44
HDAC3-203ENST00000467533 ZNF561-AS1K7EIQ3 104 aa6.05□□□□□ -1.44
HDAC3-203ENST00000467533 SMIM17P0DL12 118 aa6.05□□□□□ -1.44
HDAC3-203ENST00000467533 FGF6P10767 208 aa6.05□□□□□ -1.44
HDAC3-203ENST00000467533 CRYGAP11844 174 aa6.05□□□□□ -1.44
HDAC3-203ENST00000467533 CDC34P49427 236 aaPredicted RBP6.05□□□□□ -1.44
HDAC3-203ENST00000467533 RPL18AQ02543 176 aaKnown RBP6.05□□□□□ -1.44
HDAC3-203ENST00000467533 FOXI1Q12951 378 aa6.05□□□□□ -1.44
HDAC3-203ENST00000467533 TPRXLQ17RH7 258 aa6.05□□□□□ -1.44
HDAC3-203ENST00000467533 CARHSP1Q9Y2V2 147 aaKnown RBP6.05□□□□□ -1.44
HDAC3-203ENST00000467533 MUC21A0A140T8X8 626 aa6.04□□□□□ -1.44
HDAC3-203ENST00000467533 MGPP08493 103 aa6.04□□□□□ -1.44
HDAC3-203ENST00000467533 GCHFRP30047 84 aa6.04□□□□□ -1.44
HDAC3-203ENST00000467533 RPL12P30050 165 aaKnown RBP6.04□□□□□ -1.44
HDAC3-203ENST00000467533 SSTP61278 116 aa6.04□□□□□ -1.44
HDAC3-203ENST00000467533 LRRC37A5PQ49AS3 106 aa6.04□□□□□ -1.44
HDAC3-203ENST00000467533 SPANXN1Q5VSR9 72 aa6.04□□□□□ -1.44
HDAC3-203ENST00000467533 ISOC2Q96AB3 205 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms