RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 AMN1Q8IY45 258 aa13.9□□□□□ -0.18
NUP43-205ENST00000463048 GATD1Q8NB37 220 aa13.9□□□□□ -0.18
NUP43-205ENST00000463048 GTSF1LQ9H1H1 148 aa13.9□□□□□ -0.18
NUP43-205ENST00000463048 TNFRSF18Q9Y5U5 241 aa13.9□□□□□ -0.18
NUP43-205ENST00000463048 UBE2D3P61077 147 aa13.89□□□□□ -0.19
NUP43-205ENST00000463048 UBE2D2P62837 147 aa13.89□□□□□ -0.19
NUP43-205ENST00000463048 OR10J3Q5JRS4 329 aa13.89□□□□□ -0.19
NUP43-205ENST00000463048 DEFB104AQ8WTQ1 72 aa13.89□□□□□ -0.19
NUP43-205ENST00000463048 TMEM191AQ9H0A3 160 aa13.89□□□□□ -0.19
NUP43-205ENST00000463048 CLRN3Q8NCR9 226 aa13.88□□□□□ -0.19
NUP43-205ENST00000463048 RPL39LQ96EH5 51 aaKnown RBP13.88□□□□□ -0.19
NUP43-205ENST00000463048 UPK3BQ9BT76 320 aa13.88□□□□□ -0.19
NUP43-205ENST00000463048 RPS10P5Q9NQ39 176 aa13.88□□□□□ -0.19
NUP43-205ENST00000463048 RYR3Q15413 4870 aa13.88□□□□□ -0.19
NUP43-205ENST00000463048 C7orf77A4D0Y5 90 aa13.87□□□□□ -0.19
NUP43-205ENST00000463048 SIVA1O15304 175 aa13.87□□□□□ -0.19
NUP43-205ENST00000463048 GAS8-AS1O95177 125 aa13.87□□□□□ -0.19
NUP43-205ENST00000463048 RNF185Q96GF1 192 aa13.87□□□□□ -0.19
NUP43-205ENST00000463048 SMKR1H3BMG3 65 aa13.86□□□□□ -0.19
NUP43-205ENST00000463048 RAB4AP20338 218 aa13.86□□□□□ -0.19
NUP43-205ENST00000463048 HBBP68871 147 aa13.86□□□□□ -0.19
NUP43-205ENST00000463048 NDUFA5Q16718 116 aa13.86□□□□□ -0.19
NUP43-205ENST00000463048 CTDSP1Q9GZU7 261 aa13.86□□□□□ -0.19
NUP43-205ENST00000463048 NIT2Q9NQR4 276 aa13.86□□□□□ -0.19
NUP43-205ENST00000463048 TRAV8-6A0A0B4J262 113 aa13.85□□□□□ -0.19
NUP43-205ENST00000463048 NCR2O95944 276 aa13.85□□□□□ -0.19
NUP43-205ENST00000463048 LELP1Q5T871 98 aa13.85□□□□□ -0.19
NUP43-205ENST00000463048 KMT2AQ03164 3969 aa13.85□□□□□ -0.19
NUP43-205ENST00000463048 NBDYA0A0U1RRE5 68 aa13.84□□□□□ -0.19
NUP43-205ENST00000463048 A0A1B0GW15 77 aa13.84□□□□□ -0.19
NUP43-205ENST00000463048 A0A1B0GXF2 115 aa13.84□□□□□ -0.19
NUP43-205ENST00000463048 TIRAPP58753 221 aa13.84□□□□□ -0.19
NUP43-205ENST00000463048 DNAJC30Q96LL9 226 aa13.84□□□□□ -0.19
NUP43-205ENST00000463048 URGCP-MRPS24S4R325 110 aa13.84□□□□□ -0.19
NUP43-205ENST00000463048 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.83□□□□□ -0.2
NUP43-205ENST00000463048 DNAH6Q9C0G6 4158 aa13.83□□□□□ -0.2
NUP43-205ENST00000463048 S100A8P05109 93 aa13.82□□□□□ -0.2
NUP43-205ENST00000463048 RHEBQ15382 184 aa13.82□□□□□ -0.2
NUP43-205ENST00000463048 MRPL51Q4U2R6 128 aaKnown RBP13.82□□□□□ -0.2
NUP43-205ENST00000463048 FAM104BQ5XKR9 115 aa13.82□□□□□ -0.2
NUP43-205ENST00000463048 KCNIP4Q6PIL6 250 aa13.82□□□□□ -0.2
NUP43-205ENST00000463048 BTF3L4Q96K17 158 aa13.82□□□□□ -0.2
NUP43-205ENST00000463048 KRTAP1-5Q9BYS1 174 aa13.82□□□□□ -0.2
NUP43-205ENST00000463048 IGHV3-30P01768 117 aa13.81□□□□□ -0.2
NUP43-205ENST00000463048 IGHV3-33P01772 117 aa13.81□□□□□ -0.2
NUP43-205ENST00000463048 IGHV3-30-3P0DP02 117 aa13.81□□□□□ -0.2
NUP43-205ENST00000463048 IGHV3-30-5P0DP03 117 aa13.81□□□□□ -0.2
NUP43-205ENST00000463048 RPS10P46783 165 aaKnown RBP13.81□□□□□ -0.2
NUP43-205ENST00000463048 ATP5L2Q7Z4Y8 100 aa13.81□□□□□ -0.2
NUP43-205ENST00000463048 SVBPQ8N300 66 aa13.81□□□□□ -0.2
NUP43-205ENST00000463048 Q8N3U1 123 aa13.81□□□□□ -0.2
NUP43-205ENST00000463048 A0A087WWC5 75 aa13.8□□□□□ -0.2
NUP43-205ENST00000463048 S100PP25815 95 aa13.8□□□□□ -0.2
NUP43-205ENST00000463048 Q6ZR54 194 aa13.8□□□□□ -0.2
NUP43-205ENST00000463048 DAZ4Q86SG3 579 aaKnown RBP13.8□□□□□ -0.2
NUP43-205ENST00000463048 MRAP2Q96G30 205 aa13.8□□□□□ -0.2
NUP43-205ENST00000463048 IMMP2LQ96T52 175 aa13.8□□□□□ -0.2
NUP43-205ENST00000463048 DAZ3Q9NR90 486 aaKnown RBP13.8□□□□□ -0.2
NUP43-205ENST00000463048 SNAPINO95295 136 aa13.79□□□□□ -0.2
NUP43-205ENST00000463048 TRBV6-8A0A0A6YYG3 113 aa13.78□□□□□ -0.2
NUP43-205ENST00000463048 NTM-AS1Q6ZSK4 140 aa13.78□□□□□ -0.2
NUP43-205ENST00000463048 SDHAF1A6NFY7 115 aa13.77□□□□□ -0.21
NUP43-205ENST00000463048 CKS2P33552 79 aa13.77□□□□□ -0.21
NUP43-205ENST00000463048 TTC32Q5I0X7 151 aa13.77□□□□□ -0.21
NUP43-205ENST00000463048 CHCHD5Q9BSY4 110 aa13.77□□□□□ -0.21
NUP43-205ENST00000463048 ST20Q9HBF5 79 aa13.77□□□□□ -0.21
NUP43-205ENST00000463048 TMEM262E9PQX1 116 aa13.76□□□□□ -0.21
NUP43-205ENST00000463048 DNAH10OSP0CZ25 163 aa13.76□□□□□ -0.21
NUP43-205ENST00000463048 FRZBQ92765 325 aa13.76□□□□□ -0.21
NUP43-205ENST00000463048 TMEM242Q9NWH2 141 aa13.76□□□□□ -0.21
NUP43-205ENST00000463048 D6R8Y8 96 aa13.75□□□□□ -0.21
NUP43-205ENST00000463048 ATRAIDQ6UW56 229 aa13.75□□□□□ -0.21
NUP43-205ENST00000463048 TRAV9-2A0A087WT02 112 aa13.74□□□□□ -0.21
NUP43-205ENST00000463048 PMCHP20382 165 aa13.74□□□□□ -0.21
NUP43-205ENST00000463048 GAGE6Q13070 117 aa13.74□□□□□ -0.21
NUP43-205ENST00000463048 COTL1Q14019 142 aa13.74□□□□□ -0.21
NUP43-205ENST00000463048 C1orf134Q5TEV5 83 aa13.74□□□□□ -0.21
NUP43-205ENST00000463048 NRACQ8N912 160 aa13.74□□□□□ -0.21
NUP43-205ENST00000463048 TRBV25-1A0A075B6N4 114 aa13.73□□□□□ -0.21
NUP43-205ENST00000463048 IGHV1-24A0A0C4DH33 117 aa13.73□□□□□ -0.21
NUP43-205ENST00000463048 TRBV6-5A0A0K0K1A5 114 aa13.73□□□□□ -0.21
NUP43-205ENST00000463048 TMEM97Q5BJF2 176 aa13.73□□□□□ -0.21
NUP43-205ENST00000463048 LINC01556Q5JQF7 62 aa13.73□□□□□ -0.21
NUP43-205ENST00000463048 NIT1Q86X76 327 aa13.73□□□□□ -0.21
NUP43-205ENST00000463048 TRAV9-1A0A075B6T8 112 aa13.72□□□□□ -0.21
NUP43-205ENST00000463048 AMTP48728 403 aa13.72□□□□□ -0.21
NUP43-205ENST00000463048 C6orf223Q8N319 242 aa13.72□□□□□ -0.21
NUP43-205ENST00000463048 TMEM70Q9BUB7 260 aa13.72□□□□□ -0.21
NUP43-205ENST00000463048 A0A087WX48 190 aa13.71□□□□□ -0.21
NUP43-205ENST00000463048 TGIF2-C20orf24A0A0A6YYL0 155 aa13.71□□□□□ -0.21
NUP43-205ENST00000463048 I3L3M4 83 aa13.71□□□□□ -0.21
NUP43-205ENST00000463048 TNFRSF6BO95407 300 aa13.71□□□□□ -0.21
NUP43-205ENST00000463048 NPYP01303 97 aa13.71□□□□□ -0.21
NUP43-205ENST00000463048 TMEM136Q6ZRR5 245 aa13.71□□□□□ -0.21
NUP43-205ENST00000463048 RTL8CO15255 209 aa13.7□□□□□ -0.22
NUP43-205ENST00000463048 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
NUP43-205ENST00000463048 PRELID3AQ96N28 172 aa13.7□□□□□ -0.22
NUP43-205ENST00000463048 TMEM243Q9BU79 118 aa13.7□□□□□ -0.22
NUP43-205ENST00000463048 Q9HAA7 133 aa13.7□□□□□ -0.22
NUP43-205ENST00000463048 PPP1R17O96001 155 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms