RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 FAM74A3Q4VXF1 159 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 FAM231DQ6ZW35 169 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 URGCP-MRPS24S4R325 110 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 IBA57-AS1B1ANH7 110 aa10.1□□□□□ -0.79
ATG4B-213ENST00000460211 CTRLP40313 264 aa10.1□□□□□ -0.79
ATG4B-213ENST00000460211 KCNIP4Q6PIL6 250 aa10.1□□□□□ -0.79
ATG4B-213ENST00000460211 NEXN-AS1Q8NBZ9 246 aa10.1□□□□□ -0.79
ATG4B-213ENST00000460211 SMDT1Q9H4I9 107 aa10.1□□□□□ -0.79
ATG4B-213ENST00000460211 TNFRSF18Q9Y5U5 241 aa10.1□□□□□ -0.79
ATG4B-213ENST00000460211 TWIST1Q15672 202 aa10.09□□□□□ -0.79
ATG4B-213ENST00000460211 TMEM97Q5BJF2 176 aa10.09□□□□□ -0.79
ATG4B-213ENST00000460211 CT83Q5H943 113 aa10.09□□□□□ -0.79
ATG4B-213ENST00000460211 Q6ZRN7 208 aaPredicted RBP10.09□□□□□ -0.79
ATG4B-213ENST00000460211 SMIM15Q7Z3B0 74 aa10.09□□□□□ -0.79
ATG4B-213ENST00000460211 LINC01551Q86U37 167 aa10.09□□□□□ -0.79
ATG4B-213ENST00000460211 BORCS7Q96B45 105 aa10.09□□□□□ -0.79
ATG4B-213ENST00000460211 DPH3P1Q9H4G8 78 aa10.09□□□□□ -0.79
ATG4B-213ENST00000460211 PSCAO43653 123 aa10.08□□□□□ -0.8
ATG4B-213ENST00000460211 TMEM241Q24JQ0 296 aa10.08□□□□□ -0.8
ATG4B-213ENST00000460211 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
ATG4B-213ENST00000460211 DNAJC30Q96LL9 226 aa10.08□□□□□ -0.8
ATG4B-213ENST00000460211 CNFNQ9BYD5 112 aa10.08□□□□□ -0.8
ATG4B-213ENST00000460211 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
ATG4B-213ENST00000460211 LRP1BQ9NZR2 4599 aa10.07□□□□□ -0.8
ATG4B-213ENST00000460211 A0A087WX48 190 aa10.07□□□□□ -0.8
ATG4B-213ENST00000460211 CDK2AP2O75956 126 aa10.07□□□□□ -0.8
ATG4B-213ENST00000460211 LAGE3Q14657 143 aa10.07□□□□□ -0.8
ATG4B-213ENST00000460211 SPATA12Q7Z6I5 190 aa10.07□□□□□ -0.8
ATG4B-213ENST00000460211 C15orf54Q8N8G6 183 aa10.07□□□□□ -0.8
ATG4B-213ENST00000460211 TRBV6-8A0A0A6YYG3 113 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 TRAV8-3A0A0A6YYJ7 113 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 M0QY20 66 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 RAB14P61106 215 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 PKIAP61925 76 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 ELOBQ15370 118 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 NIT1Q86X76 327 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 GTSF1Q8WW33 167 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 TM2D2Q9BX73 214 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 Q9HAA7 133 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
ATG4B-213ENST00000460211 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
ATG4B-213ENST00000460211 FOXA3P55318 350 aaPredicted RBP10.05□□□□□ -0.8
ATG4B-213ENST00000460211 SUMO4Q6EEV6 95 aa10.05□□□□□ -0.8
ATG4B-213ENST00000460211 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
ATG4B-213ENST00000460211 TSKUQ8WUA8 353 aa10.05□□□□□ -0.8
ATG4B-213ENST00000460211 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
ATG4B-213ENST00000460211 FAM231BA6NCW3 169 aa10.04□□□□□ -0.8
ATG4B-213ENST00000460211 GFRA4Q9GZZ7 299 aa10.04□□□□□ -0.8
ATG4B-213ENST00000460211 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
ATG4B-213ENST00000460211 NAT8Q9UHE5 227 aa10.04□□□□□ -0.8
ATG4B-213ENST00000460211 A0A087WTM6 91 aa10.03□□□□□ -0.8
ATG4B-213ENST00000460211 RMI2Q96E14 147 aa10.03□□□□□ -0.8
ATG4B-213ENST00000460211 CHCHD5Q9BSY4 110 aa10.03□□□□□ -0.8
ATG4B-213ENST00000460211 NIT2Q9NQR4 276 aa10.03□□□□□ -0.8
ATG4B-213ENST00000460211 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
ATG4B-213ENST00000460211 TRBV25-1A0A075B6N4 114 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 HIGD1CA8MV81 97 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 C9JQL5 133 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 RPL23P62829 140 aaKnown RBP10.02□□□□□ -0.81
ATG4B-213ENST00000460211 SRSF3P84103 164 aaKnown RBP10.02□□□□□ -0.81
ATG4B-213ENST00000460211 ADIRFQ15847 76 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 Q8N1X5 172 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 FRZBQ92765 325 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 ISOC2Q96AB3 205 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 COX11Q9Y6N1 276 aa10.02□□□□□ -0.81
ATG4B-213ENST00000460211 A0A1B0GUT8 65 aa10.01□□□□□ -0.81
ATG4B-213ENST00000460211 CDPF1Q6NVV7 123 aa10.01□□□□□ -0.81
ATG4B-213ENST00000460211 Q8N3U1 123 aa10.01□□□□□ -0.81
ATG4B-213ENST00000460211 KLK12Q9UKR0 248 aa10.01□□□□□ -0.81
ATG4B-213ENST00000460211 IGHV1-24A0A0C4DH33 117 aa10□□□□□ -0.81
ATG4B-213ENST00000460211 KRTAP10-2P60368 255 aa10□□□□□ -0.81
ATG4B-213ENST00000460211 Q0VG73 95 aa9.99□□□□□ -0.81
ATG4B-213ENST00000460211 RIGQ13278 110 aa9.99□□□□□ -0.81
ATG4B-213ENST00000460211 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
ATG4B-213ENST00000460211 V9GYV3 84 aa9.99□□□□□ -0.81
ATG4B-213ENST00000460211 HERC1Q15751 4861 aa9.98□□□□□ -0.81
ATG4B-213ENST00000460211 ANGP03950 147 aaKnown RBP9.98□□□□□ -0.81
ATG4B-213ENST00000460211 COTL1Q14019 142 aa9.98□□□□□ -0.81
ATG4B-213ENST00000460211 IQCJQ1A5X6 159 aa9.98□□□□□ -0.81
ATG4B-213ENST00000460211 NTM-AS1Q6ZSK4 140 aa9.98□□□□□ -0.81
ATG4B-213ENST00000460211 GATD1Q8NB37 220 aa9.98□□□□□ -0.81
ATG4B-213ENST00000460211 NAT8BQ9UHF3 227 aa9.98□□□□□ -0.81
ATG4B-213ENST00000460211 DNAH5Q8TE73 4624 aa9.97□□□□□ -0.81
ATG4B-213ENST00000460211 TRAV26-2A0A0B4J265 109 aa9.97□□□□□ -0.81
ATG4B-213ENST00000460211 CRPP02741 224 aa9.97□□□□□ -0.81
ATG4B-213ENST00000460211 TMEM243Q9BU79 118 aa9.97□□□□□ -0.81
ATG4B-213ENST00000460211 TMEM191AQ9H0A3 160 aa9.97□□□□□ -0.81
ATG4B-213ENST00000460211 IGKV2D-24A0A075B6R9 120 aa9.96□□□□□ -0.82
ATG4B-213ENST00000460211 LRCOL1A6NCL2 159 aa9.96□□□□□ -0.82
ATG4B-213ENST00000460211 GAGE6Q13070 117 aa9.96□□□□□ -0.82
ATG4B-213ENST00000460211 MPV17L2Q567V2 206 aa9.96□□□□□ -0.82
ATG4B-213ENST00000460211 ATRAIDQ6UW56 229 aa9.96□□□□□ -0.82
ATG4B-213ENST00000460211 NUP35Q8NFH5 326 aa9.96□□□□□ -0.82
ATG4B-213ENST00000460211 UBE2L6O14933 153 aa9.95□□□□□ -0.82
ATG4B-213ENST00000460211 AMTP48728 403 aa9.95□□□□□ -0.82
ATG4B-213ENST00000460211 NTN5Q8WTR8 489 aaPredicted RBP9.95□□□□□ -0.82
ATG4B-213ENST00000460211 C1orf43Q9BWL3 253 aa9.95□□□□□ -0.82
ATG4B-213ENST00000460211 RBX1P62877 108 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms