RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 C9JQL5 133 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 C1orf134Q5TEV5 83 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 RASL11AQ6T310 242 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 UBE2D3P61077 147 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 UBE2D2P62837 147 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 OR10J3Q5JRS4 329 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 PGLYRP4Q96LB8 373 aa7.37□□□□□ -1.23
UBR4-208ENST00000459947 HIGD1CA8MV81 97 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 DNAH10OSP0CZ25 163 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 SRSF3P84103 164 aaKnown RBP7.36□□□□□ -1.23
UBR4-208ENST00000459947 ATP5L2Q7Z4Y8 100 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 CTDSP1Q9GZU7 261 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 TMEM191AQ9H0A3 160 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 COMMD7Q86VX2 200 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 GTSF1Q8WW33 167 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 MRAP2Q96G30 205 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 LINC01556Q5JQF7 62 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 SEC11CQ9BY50 192 aa7.36□□□□□ -1.23
UBR4-208ENST00000459947 F8W036 122 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 C6orf223Q8N319 242 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 NIT2Q9NQR4 276 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 TMEM218A2RU14 115 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 NEXN-AS1Q8NBZ9 246 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 TRAV9-1A0A075B6T8 112 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 LOC100131303A0A0U1RQF7 123 aa7.35□□□□□ -1.23
UBR4-208ENST00000459947 NCR2O95944 276 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 LINC00315P59091 139 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 SUMO4Q6EEV6 95 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 RMI2Q96E14 147 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 BTF3L4Q96K17 158 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 URGCP-MRPS24S4R325 110 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 M0QY20 66 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 TCAPO15273 167 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 SMAGPQ0VAQ4 97 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 Q6ZSN1 163 aa7.34□□□□□ -1.23
UBR4-208ENST00000459947 IGHV3-38A0A0C4DH36 116 aa7.33□□□□□ -1.24
UBR4-208ENST00000459947 LAGE3Q14657 143 aa7.33□□□□□ -1.24
UBR4-208ENST00000459947 NUP35Q8NFH5 326 aa7.33□□□□□ -1.24
UBR4-208ENST00000459947 MUC21A0A0G2JKD1 596 aa7.33□□□□□ -1.24
UBR4-208ENST00000459947 MUC21A0A140T8X8 626 aa7.33□□□□□ -1.24
UBR4-208ENST00000459947 IGLV2-18A0A075B6J9 118 aa7.33□□□□□ -1.24
UBR4-208ENST00000459947 HBBP68871 147 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 COX19Q49B96 90 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 GATD1Q8NB37 220 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 MSRB1Q9NZV6 116 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 COX11Q9Y6N1 276 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 TRBV25-1A0A075B6N4 114 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 TRBV6-5A0A0K0K1A5 114 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 SSTP61278 116 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 TM2D2Q9BX73 214 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 IGHV1-24A0A0C4DH33 117 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 EREGO14944 169 aa7.32□□□□□ -1.24
UBR4-208ENST00000459947 DNAH1Q9P2D7 4330 aa7.31□□□□□ -1.24
UBR4-208ENST00000459947 PPBPP02775 128 aa7.31□□□□□ -1.24
UBR4-208ENST00000459947 S100PP25815 95 aa7.31□□□□□ -1.24
UBR4-208ENST00000459947 TRBV6-8A0A0A6YYG3 113 aa7.31□□□□□ -1.24
UBR4-208ENST00000459947 CARHSP1Q9Y2V2 147 aaKnown RBP7.31□□□□□ -1.24
UBR4-208ENST00000459947 H7C423 109 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 M0R2N4 97 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 RHEBQ15382 184 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 TRAV8-3A0A0A6YYJ7 113 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 PHOX2AO14813 284 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 IQCJQ1A5X6 159 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 WFDC10BQ8IUB3 73 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 ST20Q9HBF5 79 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 TMEM242Q9NWH2 141 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 A0A087WX48 190 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 IBA57-AS1B1ANH7 110 aa7.3□□□□□ -1.24
UBR4-208ENST00000459947 Q0VG73 95 aa7.29□□□□□ -1.24
UBR4-208ENST00000459947 DNAH6Q9C0G6 4158 aa7.29□□□□□ -1.24
UBR4-208ENST00000459947 RPL32P62910 135 aaKnown RBP7.29□□□□□ -1.24
UBR4-208ENST00000459947 FAM104BQ5XKR9 115 aa7.29□□□□□ -1.24
UBR4-208ENST00000459947 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
UBR4-208ENST00000459947 LAMTOR2Q9Y2Q5 125 aa7.29□□□□□ -1.24
UBR4-208ENST00000459947 C10orf91Q5T1B1 145 aa7.29□□□□□ -1.24
UBR4-208ENST00000459947 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
UBR4-208ENST00000459947 PRSS29PA6NIE9 313 aa7.28□□□□□ -1.24
UBR4-208ENST00000459947 NIT1Q86X76 327 aa7.28□□□□□ -1.24
UBR4-208ENST00000459947 CHCHD5Q9BSY4 110 aa7.28□□□□□ -1.24
UBR4-208ENST00000459947 A0A1B0GXF2 115 aa7.28□□□□□ -1.24
UBR4-208ENST00000459947 RAB4AP20338 218 aa7.28□□□□□ -1.24
UBR4-208ENST00000459947 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
UBR4-208ENST00000459947 I3L3M4 83 aa7.27□□□□□ -1.24
UBR4-208ENST00000459947 UBE2L6O14933 153 aa7.27□□□□□ -1.24
UBR4-208ENST00000459947 SCO1O75880 301 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 APCSP02743 223 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 AMTP48728 403 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 SNAPINO95295 136 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 PMCHP20382 165 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 VCYO14598 125 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 SVBPQ8N300 66 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 TMEM18Q96B42 140 aa7.27□□□□□ -1.25
UBR4-208ENST00000459947 PLECQ15149 4684 aaKnown RBP7.26□□□□□ -1.25
UBR4-208ENST00000459947 CRPP02741 224 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 C12orf57Q99622 126 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 SDHAF1A6NFY7 115 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 CAMPP49913 170 aa7.26□□□□□ -1.25
UBR4-208ENST00000459947 MRPL54Q6P161 138 aaKnown RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms