RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 IGHV3-38A0A0C4DH36 116 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 LY6G6EA0A0G2JKS1 128 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 TMEM89A2RUT3 159 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 IGHV3-53P01767 116 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 CTSZQ9UBR2 303 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 U3KQA8 63 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 ARHGAP21Q5T5U3 1957 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 WNK2Q9Y3S1 2297 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 KIAA1549LQ6ZVL6 1849 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 TRAV7A0A075B6U4 112 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 ELANEP08246 267 aa3.81□□□□□ -1.8
PCDH9-203ENST00000456367 RNASE13Q5GAN3 156 aaKnown RBP3.81□□□□□ -1.8
PCDH9-203ENST00000456367 B4DSR2 109 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 HOXB4P17483 251 aaPredicted RBP3.8□□□□□ -1.8
PCDH9-203ENST00000456367 FER1L5A0AVI2 2057 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 IGLV4-3A0A075B6K6 122 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 HRCT1Q6UXD1 115 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 BCE1O60756 84 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 CRYGAP11844 174 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 MIR7-3HGQ8N6C7 128 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 WFDC9Q8NEX5 89 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 IGHV3-16A0A0C4DH30 117 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 FSTL3O95633 263 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 U3KQE9 123 aa3.8□□□□□ -1.8
PCDH9-203ENST00000456367 ICE1Q9Y2F5 2266 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 NCKAP5O14513 1909 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 LINC01546A6NGU7 62 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 IBA57-AS1B1ANH7 110 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 PLA2G5P39877 138 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 HIGD2BQ4VC39 106 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 NKAPP1Q8N9T2 125 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 Q9HAA7 133 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 A0A096LNJ9 63 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 K7EQD1 137 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 PRSS33Q8NF86 280 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 RITA1Q96K30 269 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 NUP210LQ5VU65 1888 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
PCDH9-203ENST00000456367 C4orf48Q5BLP8 95 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 SBSPONQ8IVN8 264 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 PRO0461Q9UI25 63 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 NDUFB1O75438 58 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 TMEM105Q8N8V8 129 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 AJUBAQ96IF1 538 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 PPDPFQ9H3Y8 114 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 PCNX3Q9H6A9 2034 aa3.79□□□□□ -1.8
PCDH9-203ENST00000456367 COX6B1P14854 86 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 GTF3C1Q12789 2109 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 ENHOQ6UWT2 76 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 Q6ZQT7 251 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 Q8N9W7 124 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 UBE2E2Q96LR5 201 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 CEP250Q9BV73 2442 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 A0A0U1RQV1 116 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 GPHB5Q86YW7 130 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 PRORYQ9H606 182 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 J3QLI3 93 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 DIRC1Q969H9 104 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 XCL2Q9UBD3 114 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 TNRC6BQ9UPQ9 1833 aaKnown RBP3.78□□□□□ -1.8
PCDH9-203ENST00000456367 LOC107984640A0A0U1RRK4 108 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 IGIPA6NJ69 53 aa3.78□□□□□ -1.8
PCDH9-203ENST00000456367 DAZAP2Q15038 168 aaPredicted RBP3.78□□□□□ -1.8
PCDH9-203ENST00000456367 ATG2AQ2TAZ0 1938 aa3.78□□□□□ -1.81
PCDH9-203ENST00000456367 PIK3CD-AS1Q5SR53 167 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 IGFL2Q6UWQ7 119 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 MED12LQ86YW9 2145 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 TRBV10-3A0A0K0K1G6 114 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 BPY2O14599 106 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 PSMG3-AS1Q96PY0 264 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 COL4A6Q14031 1691 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 M0QY20 66 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 Q6ZS46 218 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 MUC7Q8TAX7 377 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 FAM215AQ9Y5M1 114 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 ZNF407Q9C0G0 2248 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 CCKP06307 115 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 EDN2P20800 178 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 MPLKIPQ8TAP9 179 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 CDKN2A-AS1Q9UH64 79 aa3.77□□□□□ -1.81
PCDH9-203ENST00000456367 ABCA1O95477 2261 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 A8MZ25 164 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 BRI3O95415 125 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 ZFAND2AQ8N6M9 145 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 WFDC11Q8NEX6 87 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 C16orf74Q96GX8 76 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 UBE2BP63146 152 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 BRD3OSQ6XYD6 125 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 FAM19A3Q7Z5A8 133 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 C5orf38Q86SI9 138 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 SPRY2O43597 315 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 HTN3P15516 51 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 SPRNQ5BIV9 151 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 C1orf229Q6ZS94 237 aaPredicted RBP3.76□□□□□ -1.81
PCDH9-203ENST00000456367 IGLV2-18A0A075B6J9 118 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 MIFP14174 115 aa3.76□□□□□ -1.81
PCDH9-203ENST00000456367 RPL28P46779 137 aaKnown RBP3.76□□□□□ -1.81
PCDH9-203ENST00000456367 XCL1P47992 114 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 EBI3Q14213 229 aa3.75□□□□□ -1.81
PCDH9-203ENST00000456367 C5orf56Q8N8D9 126 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms