RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 RBMY1EA6NEQ0 496 aaKnown RBP9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 RBMY1DP0C7P1 496 aaKnown RBP9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 SLURP1P55000 103 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 DEFB131AP59861 70 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 ZNF415Q09FC8 603 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 BEAN1Q3B7T3 259 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 SCGB1D4Q6XE38 83 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 DUX5Q96PT3 197 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 SPXQ9BT56 116 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 PRO0461Q9UI25 63 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 CSPG4Q6UVK1 2322 aa9.16□□□□□ -0.94
ECHDC1-209ENST00000454591 TRAV25A0A0B4J276 109 aa9.15□□□□□ -0.94
ECHDC1-209ENST00000454591 J3QQQ9 107 aa9.15□□□□□ -0.94
ECHDC1-209ENST00000454591 RHODO00212 210 aa9.15□□□□□ -0.94
ECHDC1-209ENST00000454591 IGHV3-30P01768 117 aa9.15□□□□□ -0.94
ECHDC1-209ENST00000454591 IGHV3-30-5P0DP03 117 aa9.15□□□□□ -0.94
ECHDC1-209ENST00000454591 TSPEAR-AS2P59090 65 aa9.15□□□□□ -0.94
ECHDC1-209ENST00000454591 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.94
ECHDC1-209ENST00000454591 KNCNA6PVL3 124 aa9.15□□□□□ -0.95
ECHDC1-209ENST00000454591 ZNF22P17026 224 aaPredicted RBP9.15□□□□□ -0.95
ECHDC1-209ENST00000454591 KRTAP1-3Q8IUG1 177 aa9.15□□□□□ -0.95
ECHDC1-209ENST00000454591 ZNF843Q8N446 348 aa9.15□□□□□ -0.95
ECHDC1-209ENST00000454591 MAPK1IP1LQ8NDC0 245 aa9.15□□□□□ -0.95
ECHDC1-209ENST00000454591 KLHL30-AS1Q8NEE0 82 aa9.15□□□□□ -0.95
ECHDC1-209ENST00000454591 DNAJC30Q96LL9 226 aa9.15□□□□□ -0.95
ECHDC1-209ENST00000454591 UBE2D3P61077 147 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 UBE2D2P62837 147 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 MRPS36P82909 103 aaKnown RBP9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 SRSF9Q13242 221 aaKnown RBP eCLIP9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 DEFB114Q30KQ6 69 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 TMEM170BQ5T4T1 132 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 LYRM7Q5U5X0 104 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 TMEM61Q8N0U2 210 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 C11orf72Q8NBR9 251 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 FAM104AQ969W3 186 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 MAP6D1Q9H9H5 199 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 DOPEY2Q9Y3R5 2298 aa9.14□□□□□ -0.95
ECHDC1-209ENST00000454591 C18orf65Q6ZTR6 163 aa9.13□□□□□ -0.95
ECHDC1-209ENST00000454591 NDUFA11Q86Y39 141 aa9.13□□□□□ -0.95
ECHDC1-209ENST00000454591 BBC3Q96PG8 261 aaPredicted RBP9.13□□□□□ -0.95
ECHDC1-209ENST00000454591 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
ECHDC1-209ENST00000454591 PGPEP1Q9NXJ5 209 aa9.13□□□□□ -0.95
ECHDC1-209ENST00000454591 NACAE9PAV3 2078 aa9.13□□□□□ -0.95
ECHDC1-209ENST00000454591 SPG11Q96JI7 2443 aa9.13□□□□□ -0.95
ECHDC1-209ENST00000454591 IGHV3-53P01767 116 aa9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 KRTAP10-9P60411 292 aa9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 GAGE13Q4V321 117 aa9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 ATP6V0E2Q8NHE4 81 aa9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 VCX2Q9H322 139 aa9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 CELSR1Q9NYQ6 3014 aa9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 CHD6Q8TD26 2715 aa9.12□□□□□ -0.95
ECHDC1-209ENST00000454591 TEX48A0A1B0GUV7 120 aa9.11□□□□□ -0.95
ECHDC1-209ENST00000454591 RS1O15537 224 aa9.11□□□□□ -0.95
ECHDC1-209ENST00000454591 TSPAN13O95857 204 aa9.11□□□□□ -0.95
ECHDC1-209ENST00000454591 EMP1P54849 157 aa9.11□□□□□ -0.95
ECHDC1-209ENST00000454591 CFAP126Q5VTH2 177 aa9.11□□□□□ -0.95
ECHDC1-209ENST00000454591 RAX2Q96IS3 184 aa9.11□□□□□ -0.95
ECHDC1-209ENST00000454591 DUX3Q96PT4 197 aa9.11□□□□□ -0.95
ECHDC1-209ENST00000454591 H3BMG7 143 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 J3QR89 54 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 INSP01308 110 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 FHL3Q13643 280 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 WFDC2Q14508 124 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 DEFB136Q30KP8 78 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 IL17DQ8TAD2 202 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 Q96MF0 132 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 CHCHD7Q9BUK0 85 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 MRPL16Q9NX20 251 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 TNFRSF18Q9Y5U5 241 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 ANKRD17O75179 2603 aaKnown RBP9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 USP24Q9UPU5 2620 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 TRBV20-1A0A075B6N2 111 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 PRB1P04280 392 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 CFC1BP0CG36 223 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 CFC1P0CG37 223 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 COTL1Q14019 142 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 C10orf126Q8N4M7 172 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 DYNLRB2Q8TF09 96 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 OPRPNQ99935 248 aaPredicted RBP9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 FLNCQ14315 2725 aa9.1□□□□□ -0.95
ECHDC1-209ENST00000454591 A0A0B4J2C4 111 aa9.09□□□□□ -0.95
ECHDC1-209ENST00000454591 A0A0J9YXV3 536 aa9.09□□□□□ -0.95
ECHDC1-209ENST00000454591 TINCRA0A1B0GVN0 87 aa9.09□□□□□ -0.95
ECHDC1-209ENST00000454591 RPL24P83731 157 aaKnown RBP9.09□□□□□ -0.95
ECHDC1-209ENST00000454591 Q6ZSV7 163 aa9.09□□□□□ -0.95
ECHDC1-209ENST00000454591 TMEM238C9JI98 176 aa9.08□□□□□ -0.96
ECHDC1-209ENST00000454591 CD28P10747 220 aa9.08□□□□□ -0.96
ECHDC1-209ENST00000454591 SBSPONQ8IVN8 264 aa9.08□□□□□ -0.96
ECHDC1-209ENST00000454591 UBE2D4Q9Y2X8 147 aa9.08□□□□□ -0.96
ECHDC1-209ENST00000454591 COL12A1Q99715 3063 aa9.08□□□□□ -0.96
ECHDC1-209ENST00000454591 M0QXV9 152 aa9.07□□□□□ -0.96
ECHDC1-209ENST00000454591 RNF183Q96D59 192 aa9.07□□□□□ -0.96
ECHDC1-209ENST00000454591 PRO1854Q9UHT4 67 aa9.07□□□□□ -0.96
ECHDC1-209ENST00000454591 FBN2P35556 2912 aa9.07□□□□□ -0.96
ECHDC1-209ENST00000454591 UBR5O95071 2799 aaPredicted RBP9.07□□□□□ -0.96
ECHDC1-209ENST00000454591 CELSR2Q9HCU4 2923 aa9.07□□□□□ -0.96
ECHDC1-209ENST00000454591 CMC4P56277 68 aaPredicted RBP9.06□□□□□ -0.96
ECHDC1-209ENST00000454591 PROK1P58294 105 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms