RNA–Protein interactions for RNA: ENST00000453960.6

MECP2-205, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene MECP2, Length 1,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-205ENST00000453960 UFSP1Q6NVU6 142 aa13.31□□□□□ -0.28
MECP2-205ENST00000453960 MAPKAPK5-AS1Q8N8E1 139 aa13.31□□□□□ -0.28
MECP2-205ENST00000453960 RAX2Q96IS3 184 aa13.31□□□□□ -0.28
MECP2-205ENST00000453960 CHAC1Q9BUX1 264 aa13.31□□□□□ -0.28
MECP2-205ENST00000453960 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
MECP2-205ENST00000453960 TP53TG1Q9Y2A0 90 aa13.31□□□□□ -0.28
MECP2-205ENST00000453960 E9PLD3 99 aa13.3□□□□□ -0.28
MECP2-205ENST00000453960 C9orf118A6NHY6 69 aa13.3□□□□□ -0.28
MECP2-205ENST00000453960 FAM74A4Q5TZK3 123 aa13.3□□□□□ -0.28
MECP2-205ENST00000453960 DYNLRB2Q8TF09 96 aa13.3□□□□□ -0.28
MECP2-205ENST00000453960 IGLV4-69A0A075B6H9 119 aa13.29□□□□□ -0.28
MECP2-205ENST00000453960 TRAV8-6A0A0B4J262 113 aa13.29□□□□□ -0.28
MECP2-205ENST00000453960 VAMP3Q15836 100 aa13.29□□□□□ -0.28
MECP2-205ENST00000453960 ZNF56Q15929 161 aa13.29□□□□□ -0.28
MECP2-205ENST00000453960 CD300EQ496F6 205 aaPredicted RBP13.29□□□□□ -0.28
MECP2-205ENST00000453960 PAPPA-AS1Q5QFB9 102 aa13.29□□□□□ -0.28
MECP2-205ENST00000453960 RNASE1P07998 156 aaKnown RBP13.28□□□□□ -0.28
MECP2-205ENST00000453960 PMVKQ15126 192 aa13.28□□□□□ -0.28
MECP2-205ENST00000453960 M0R2P5 195 aa13.27□□□□□ -0.28
MECP2-205ENST00000453960 KHDC1LQ5JSQ8 128 aa13.27□□□□□ -0.28
MECP2-205ENST00000453960 A8MWV9 139 aa13.27□□□□□ -0.29
MECP2-205ENST00000453960 P0DMU3 169 aa13.27□□□□□ -0.29
MECP2-205ENST00000453960 FAM231AP0DMU4 169 aa13.27□□□□□ -0.29
MECP2-205ENST00000453960 FAM231CP0DMU5 169 aa13.27□□□□□ -0.29
MECP2-205ENST00000453960 RPL39P62891 51 aaKnown RBP13.27□□□□□ -0.29
MECP2-205ENST00000453960 ODF3L2Q3SX64 289 aa13.27□□□□□ -0.29
MECP2-205ENST00000453960 C11orf72Q8NBR9 251 aa13.27□□□□□ -0.29
MECP2-205ENST00000453960 CST9LQ9H4G1 147 aa13.27□□□□□ -0.29
MECP2-205ENST00000453960 SONP18583 2426 aaKnown RBP13.27□□□□□ -0.29
MECP2-205ENST00000453960 OR11H12B2RN74 326 aa13.26□□□□□ -0.29
MECP2-205ENST00000453960 K7EP13 123 aa13.26□□□□□ -0.29
MECP2-205ENST00000453960 ZNF415Q09FC8 603 aa13.26□□□□□ -0.29
MECP2-205ENST00000453960 BEAN1Q3B7T3 259 aa13.26□□□□□ -0.29
MECP2-205ENST00000453960 AMMECR1LQ6DCA0 310 aa13.26□□□□□ -0.29
MECP2-205ENST00000453960 CEND1Q8N111 149 aa13.26□□□□□ -0.29
MECP2-205ENST00000453960 OR11H2Q8NH07 326 aa13.26□□□□□ -0.29
MECP2-205ENST00000453960 TEP1Q99973 2627 aaKnown RBP13.26□□□□□ -0.29
MECP2-205ENST00000453960 I3L3M4 83 aa13.25□□□□□ -0.29
MECP2-205ENST00000453960 CCL24O00175 119 aa13.25□□□□□ -0.29
MECP2-205ENST00000453960 FXYD2P54710 66 aa13.25□□□□□ -0.29
MECP2-205ENST00000453960 C20orf203Q8NBC4 194 aa13.25□□□□□ -0.29
MECP2-205ENST00000453960 MYMXA0A1B0GTQ4 84 aa13.25□□□□□ -0.29
MECP2-205ENST00000453960 CD28P10747 220 aa13.25□□□□□ -0.29
MECP2-205ENST00000453960 PHLDA1Q8WV24 401 aaPredicted RBP13.25□□□□□ -0.29
MECP2-205ENST00000453960 SPXQ9BT56 116 aa13.25□□□□□ -0.29
MECP2-205ENST00000453960 TRBV7-3A0A075B6L6 115 aa13.24□□□□□ -0.29
MECP2-205ENST00000453960 C11orf86A6NJI1 115 aa13.24□□□□□ -0.29
MECP2-205ENST00000453960 CCDC168Q8NDH2 2452 aa13.23□□□□□ -0.29
MECP2-205ENST00000453960 INSP01308 110 aa13.23□□□□□ -0.29
MECP2-205ENST00000453960 NFE4Q86UQ8 179 aa13.23□□□□□ -0.29
MECP2-205ENST00000453960 LINC01006Q8NI28 216 aa13.23□□□□□ -0.29
MECP2-205ENST00000453960 PRADC1Q9BSG0 188 aa13.23□□□□□ -0.29
MECP2-205ENST00000453960 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
MECP2-205ENST00000453960 NF1P21359 2839 aa13.22□□□□□ -0.29
MECP2-205ENST00000453960 GCSHP23434 173 aa13.22□□□□□ -0.29
MECP2-205ENST00000453960 OR4C5Q8NGB2 326 aa13.22□□□□□ -0.29
MECP2-205ENST00000453960 IL17DQ8TAD2 202 aa13.22□□□□□ -0.29
MECP2-205ENST00000453960 PYGO1Q9Y3Y4 419 aa13.22□□□□□ -0.29
MECP2-205ENST00000453960 SMIM13P0DJ93 91 aa13.21□□□□□ -0.3
MECP2-205ENST00000453960 CFAP126Q5VTH2 177 aa13.21□□□□□ -0.3
MECP2-205ENST00000453960 HIST2H2BDQ6DRA6 164 aa13.21□□□□□ -0.3
MECP2-205ENST00000453960 RHODO00212 210 aa13.2□□□□□ -0.3
MECP2-205ENST00000453960 CRYBA4P53673 196 aa13.2□□□□□ -0.3
MECP2-205ENST00000453960 SCGB2A2Q13296 93 aa13.2□□□□□ -0.3
MECP2-205ENST00000453960 CITED2Q99967 270 aaPredicted RBP13.2□□□□□ -0.3
MECP2-205ENST00000453960 A0A1B0GWB2 263 aa13.19□□□□□ -0.3
MECP2-205ENST00000453960 RS1O15537 224 aa13.19□□□□□ -0.3
MECP2-205ENST00000453960 OTOGQ6ZRI0 2925 aa13.19□□□□□ -0.3
MECP2-205ENST00000453960 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
MECP2-205ENST00000453960 FAM110AQ9BQ89 295 aa13.19□□□□□ -0.3
MECP2-205ENST00000453960 YAE1D1Q9NRH1 226 aa13.19□□□□□ -0.3
MECP2-205ENST00000453960 LINC01587Q99440 93 aa13.19□□□□□ -0.3
MECP2-205ENST00000453960 H3BUT2 72 aa13.18□□□□□ -0.3
MECP2-205ENST00000453960 NDUFA7O95182 113 aa13.18□□□□□ -0.3
MECP2-205ENST00000453960 IGHV3-53P01767 116 aa13.18□□□□□ -0.3
MECP2-205ENST00000453960 PRM2P04554 102 aa13.18□□□□□ -0.3
MECP2-205ENST00000453960 FAM104AQ969W3 186 aa13.18□□□□□ -0.3
MECP2-205ENST00000453960 DNAJC30Q96LL9 226 aa13.18□□□□□ -0.3
MECP2-205ENST00000453960 A0A1W2PPM0 123 aa13.17□□□□□ -0.3
MECP2-205ENST00000453960 K7EP34 96 aa13.17□□□□□ -0.3
MECP2-205ENST00000453960 CMC4P56277 68 aaPredicted RBP13.17□□□□□ -0.3
MECP2-205ENST00000453960 PROK1P58294 105 aa13.17□□□□□ -0.3
MECP2-205ENST00000453960 HILS1P60008 231 aa13.17□□□□□ -0.3
MECP2-205ENST00000453960 HERVK_113P61574 105 aa13.17□□□□□ -0.3
MECP2-205ENST00000453960 C1orf158Q8N1D5 194 aa13.17□□□□□ -0.3
MECP2-205ENST00000453960 IGLV4-3A0A075B6K6 122 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 CUBNO60494 3623 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 ADARB2-AS1A8MUL3 147 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 HTN1P15515 57 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 Q6ZSN1 163 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 GTF2H5Q6ZYL4 71 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 DEFB104AQ8WTQ1 72 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 AMELXQ99217 191 aa13.16□□□□□ -0.3
MECP2-205ENST00000453960 GAGE10A6NGK3 116 aa13.15□□□□□ -0.3
MECP2-205ENST00000453960 STHQ8IWL8 128 aa13.15□□□□□ -0.3
MECP2-205ENST00000453960 OR5A1Q8NGJ0 315 aa13.15□□□□□ -0.3
MECP2-205ENST00000453960 A0A1W2PRX2 142 aa13.14□□□□□ -0.31
MECP2-205ENST00000453960 ZNF815PA8K554 130 aa13.14□□□□□ -0.31
MECP2-205ENST00000453960 C11orf44Q8N8P7 122 aa13.14□□□□□ -0.31
MECP2-205ENST00000453960 ACANP16112 2415 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms