RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 BTF3L4Q96K17 158 aa6.41□□□□□ -1.38
RFX3-207ENST00000449190 TRBV10-1A0A0K0K1A3 114 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 P0DMU3 169 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 FAM231AP0DMU4 169 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 FAM231CP0DMU5 169 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 HBBP68871 147 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 RPL36AP83881 106 aaKnown RBP6.4□□□□□ -1.38
RFX3-207ENST00000449190 Q6ZSN1 163 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 UBE2DNLQ8IWF7 75 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 RPL36ALQ969Q0 106 aaKnown RBP6.4□□□□□ -1.38
RFX3-207ENST00000449190 TMEM191AQ9H0A3 160 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 KIF25-AS1Q9Y6Z4 181 aa6.4□□□□□ -1.38
RFX3-207ENST00000449190 TRAV9-1A0A075B6T8 112 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 GAGE12JA6NER3 117 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 CCL18P55774 89 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 GAGE1Q13065 139 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 GAGE4Q13068 117 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 GAGE5Q13069 117 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 GAGE13Q4V321 117 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 SUMO4Q6EEV6 95 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 NEGR1Q7Z3B1 354 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 FRZBQ92765 325 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 DNAJC30Q96LL9 226 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 TNFRSF18Q9Y5U5 241 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 CSMD3Q7Z407 3707 aa6.39□□□□□ -1.39
RFX3-207ENST00000449190 RYR3Q15413 4870 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 A0A096LPF7 62 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 LOC100131303A0A0U1RQF7 123 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 RASL11AQ6T310 242 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 ATP6V0E2Q8NHE4 81 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 ZNRF2Q8NHG8 242 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 URGCP-MRPS24S4R325 110 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 MUC4Q99102 2169 aa6.38□□□□□ -1.39
RFX3-207ENST00000449190 TRBV7-3A0A075B6L6 115 aa6.37□□□□□ -1.39
RFX3-207ENST00000449190 PPP1R17O96001 155 aa6.37□□□□□ -1.39
RFX3-207ENST00000449190 RAB4AP20338 218 aa6.37□□□□□ -1.39
RFX3-207ENST00000449190 LINC00315P59091 139 aa6.37□□□□□ -1.39
RFX3-207ENST00000449190 FAM104BQ5XKR9 115 aa6.37□□□□□ -1.39
RFX3-207ENST00000449190 MRAP2Q96G30 205 aa6.37□□□□□ -1.39
RFX3-207ENST00000449190 NIT2Q9NQR4 276 aa6.37□□□□□ -1.39
RFX3-207ENST00000449190 PLECQ15149 4684 aaKnown RBP6.37□□□□□ -1.39
RFX3-207ENST00000449190 A0A1B0GXF2 115 aa6.36□□□□□ -1.39
RFX3-207ENST00000449190 M0QY20 66 aa6.36□□□□□ -1.39
RFX3-207ENST00000449190 COX19Q49B96 90 aa6.36□□□□□ -1.39
RFX3-207ENST00000449190 AMN1Q8IY45 258 aa6.36□□□□□ -1.39
RFX3-207ENST00000449190 GATD1Q8NB37 220 aa6.36□□□□□ -1.39
RFX3-207ENST00000449190 SMCO4Q9NRQ5 59 aa6.36□□□□□ -1.39
RFX3-207ENST00000449190 RYR2Q92736 4967 aa6.36□□□□□ -1.39
RFX3-207ENST00000449190 TRAV26-2A0A0B4J265 109 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 CKS2P33552 79 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 ESRGQ1W209 222 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 TMEM97Q5BJF2 176 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 OR10J3Q5JRS4 329 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 LYPD5Q6UWN5 251 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 DAZ4Q86SG3 579 aaKnown RBP6.35□□□□□ -1.39
RFX3-207ENST00000449190 NEXN-AS1Q8NBZ9 246 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 KRTAP4-11Q9BYQ6 195 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 GTSF1LQ9H1H1 148 aa6.35□□□□□ -1.39
RFX3-207ENST00000449190 DAZ3Q9NR90 486 aaKnown RBP6.35□□□□□ -1.39
RFX3-207ENST00000449190 TRAV8-6A0A0B4J262 113 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 PPBPP02775 128 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 TIRAPP58753 221 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 UBE2D3P61077 147 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 UBE2D2P62837 147 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 MRPL51Q4U2R6 128 aaKnown RBP6.34□□□□□ -1.39
RFX3-207ENST00000449190 ATRAIDQ6UW56 229 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 RNF185Q96GF1 192 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 ST20Q9HBF5 79 aa6.34□□□□□ -1.39
RFX3-207ENST00000449190 APCSP02743 223 aa6.33□□□□□ -1.4
RFX3-207ENST00000449190 PMCHP20382 165 aa6.33□□□□□ -1.4
RFX3-207ENST00000449190 S100A1P23297 94 aa6.33□□□□□ -1.4
RFX3-207ENST00000449190 TMEM136Q6ZRR5 245 aa6.33□□□□□ -1.4
RFX3-207ENST00000449190 GNB1LQ9BYB4 327 aa6.33□□□□□ -1.4
RFX3-207ENST00000449190 Q9UF83 564 aa6.33□□□□□ -1.4
RFX3-207ENST00000449190 MRPS16Q9Y3D3 137 aaKnown RBP6.33□□□□□ -1.4
RFX3-207ENST00000449190 LINC00588Q9Y4M8 146 aa6.33□□□□□ -1.4
RFX3-207ENST00000449190 TRBV24-1A0A075B6N3 115 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 IGHV3-38A0A0C4DH36 116 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 TRBV6-5A0A0K0K1A5 114 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 SMKR1H3BMG3 65 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 NCR2O95944 276 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 MT-ND6P03923 174 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 COTL1Q14019 142 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 ELOBQ15370 118 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 LELP1Q5T871 98 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 ORMDL3Q8N138 153 aa6.32□□□□□ -1.4
RFX3-207ENST00000449190 RPL39LQ96EH5 51 aaKnown RBP6.32□□□□□ -1.4
RFX3-207ENST00000449190 SACSQ9NZJ4 4579 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 TRAV9-2A0A087WT02 112 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 TGIF2-C20orf24A0A0A6YYL0 155 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 SDHAF1A6NFY7 115 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 D6R8Y8 96 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 I3L3M4 83 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 VCYO14598 125 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 LINC00694P0DN24 101 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 FABP9Q0Z7S8 132 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 CBLN2Q8IUK8 224 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 PRELID3AQ96N28 172 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 C20orf78Q9BR46 151 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms