RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 IGHV4-4A0A075B6R2 117 aa12.57□□□□□ -0.4
TCOF1-206ENST00000445265 APRG1Q8IVJ8 170 aa12.56□□□□□ -0.4
TCOF1-206ENST00000445265 FOXI1Q12951 378 aa12.56□□□□□ -0.4
TCOF1-206ENST00000445265 GAGE6Q13070 117 aa12.56□□□□□ -0.4
TCOF1-206ENST00000445265 TRAV13-2A0A0B4J235 113 aa12.56□□□□□ -0.4
TCOF1-206ENST00000445265 COX8CQ7Z4L0 72 aa12.56□□□□□ -0.4
TCOF1-206ENST00000445265 MAPKAPK5-AS1Q8N8E1 139 aa12.55□□□□□ -0.4
TCOF1-206ENST00000445265 NACAE9PAV3 2078 aa12.55□□□□□ -0.4
TCOF1-206ENST00000445265 GAGE2AQ6NT46 116 aa12.55□□□□□ -0.4
TCOF1-206ENST00000445265 ATP6V0E2Q8NHE4 81 aa12.55□□□□□ -0.4
TCOF1-206ENST00000445265 DSCAML1Q8TD84 2053 aa12.55□□□□□ -0.4
TCOF1-206ENST00000445265 NDUFA11Q86Y39 141 aa12.55□□□□□ -0.4
TCOF1-206ENST00000445265 NCOR2Q9Y618 2525 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 MRGPRG-AS1Q2M3A8 158 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 HERV-K104P63124 156 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 CEP295Q9C0D2 2601 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 C19orf84I3L1E1 186 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 LINC01620Q4KN68 170 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 K7EQG2 157 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 PFN2P35080 140 aa12.54□□□□□ -0.4
TCOF1-206ENST00000445265 CLPSL1A2RUU4 121 aa12.53□□□□□ -0.4
TCOF1-206ENST00000445265 CCL24O00175 119 aa12.53□□□□□ -0.4
TCOF1-206ENST00000445265 NOP10Q9NPE3 64 aaKnown RBP12.53□□□□□ -0.4
TCOF1-206ENST00000445265 GAS8-AS1O95177 125 aa12.52□□□□□ -0.41
TCOF1-206ENST00000445265 SLC25A29Q8N8R3 303 aa12.52□□□□□ -0.41
TCOF1-206ENST00000445265 OPRPNQ99935 248 aaPredicted RBP12.52□□□□□ -0.41
TCOF1-206ENST00000445265 ICOSQ9Y6W8 199 aa12.52□□□□□ -0.41
TCOF1-206ENST00000445265 DAZ2Q13117 558 aaKnown RBP12.51□□□□□ -0.41
TCOF1-206ENST00000445265 DAZ4Q86SG3 579 aaKnown RBP12.51□□□□□ -0.41
TCOF1-206ENST00000445265 NRGNQ92686 78 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 SPANXDQ9BXN6 97 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 DAZ3Q9NR90 486 aaKnown RBP12.51□□□□□ -0.41
TCOF1-206ENST00000445265 IGHV1-58A0A0C4DH39 117 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 F8W735 103 aaPredicted RBP12.51□□□□□ -0.41
TCOF1-206ENST00000445265 RPL32P62910 135 aaKnown RBP12.51□□□□□ -0.41
TCOF1-206ENST00000445265 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 LGALS9O00182 355 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 IGHV3-30-3P0DP02 117 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 TMEM61Q8N0U2 210 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 PTPN13Q12923 2485 aa12.51□□□□□ -0.41
TCOF1-206ENST00000445265 SORL1Q92673 2214 aa12.5□□□□□ -0.41
TCOF1-206ENST00000445265 PRR9Q5T870 116 aa12.5□□□□□ -0.41
TCOF1-206ENST00000445265 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
TCOF1-206ENST00000445265 C15orf53Q8NAA6 179 aa12.5□□□□□ -0.41
TCOF1-206ENST00000445265 PIEZO1Q92508 2521 aa12.5□□□□□ -0.41
TCOF1-206ENST00000445265 K7EQD1 137 aa12.5□□□□□ -0.41
TCOF1-206ENST00000445265 TRBV7-3A0A075B6L6 115 aa12.49□□□□□ -0.41
TCOF1-206ENST00000445265 TRAV25A0A0B4J276 109 aa12.49□□□□□ -0.41
TCOF1-206ENST00000445265 RNASE3P12724 160 aaKnown RBP12.49□□□□□ -0.41
TCOF1-206ENST00000445265 C2CD3Q4AC94 2353 aa12.49□□□□□ -0.41
TCOF1-206ENST00000445265 A0A0J9YY99 117 aa12.48□□□□□ -0.41
TCOF1-206ENST00000445265 TRBV27A0A0K0K1C4 114 aa12.48□□□□□ -0.41
TCOF1-206ENST00000445265 CDSNQ15517 529 aa12.48□□□□□ -0.41
TCOF1-206ENST00000445265 VSIG2Q96IQ7 327 aa12.48□□□□□ -0.41
TCOF1-206ENST00000445265 SPANXB1Q9NS25 103 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-206ENST00000445265 RAI1Q7Z5J4 1906 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-206ENST00000445265 TRBV6-5A0A0K0K1A5 114 aa12.48□□□□□ -0.41
TCOF1-206ENST00000445265 SOCS3O14543 225 aa12.48□□□□□ -0.41
TCOF1-206ENST00000445265 HHLA3Q9XRX5 114 aa12.48□□□□□ -0.41
TCOF1-206ENST00000445265 NAV2Q8IVL1 2488 aa12.47□□□□□ -0.41
TCOF1-206ENST00000445265 A0A096LNJ9 63 aa12.47□□□□□ -0.41
TCOF1-206ENST00000445265 M0QY20 66 aa12.47□□□□□ -0.41
TCOF1-206ENST00000445265 C4orf3Q8WVX3 66 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 C16orf74Q96GX8 76 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 PRORYQ9H606 182 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 MYO9AB2RTY4 2548 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 A0A0B4J2C4 111 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 KLLNB2CW77 178 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 CRYBA4P53673 196 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 LAMTOR3Q9UHA4 124 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 TCL1BO95988 128 aa12.46□□□□□ -0.41
TCOF1-206ENST00000445265 TRBV10-2A0A0K0K1G8 114 aa12.46□□□□□ -0.42
TCOF1-206ENST00000445265 PTH2Q96A98 100 aa12.45□□□□□ -0.42
TCOF1-206ENST00000445265 HIST1H4AP62805 103 aaKnown RBP12.45□□□□□ -0.42
TCOF1-206ENST00000445265 H3BT86 120 aa12.45□□□□□ -0.42
TCOF1-206ENST00000445265 ZMAT4Q9H898 229 aa12.45□□□□□ -0.42
TCOF1-206ENST00000445265 ANKRD11Q6UB99 2663 aaPredicted RBP12.45□□□□□ -0.42
TCOF1-206ENST00000445265 A0A0J9YXY3 114 aa12.45□□□□□ -0.42
TCOF1-206ENST00000445265 ACYP1P07311 99 aa12.45□□□□□ -0.42
TCOF1-206ENST00000445265 ZNF22P17026 224 aaPredicted RBP12.44□□□□□ -0.42
TCOF1-206ENST00000445265 DAD1P61803 113 aa12.44□□□□□ -0.42
TCOF1-206ENST00000445265 PSMG3-AS1Q96PY0 264 aa12.44□□□□□ -0.42
TCOF1-206ENST00000445265 POLR2KP53803 58 aaKnown RBP12.44□□□□□ -0.42
TCOF1-206ENST00000445265 TRBV10-1A0A0K0K1A3 114 aa12.44□□□□□ -0.42
TCOF1-206ENST00000445265 BAALC-AS2P0C853 105 aa12.44□□□□□ -0.42
TCOF1-206ENST00000445265 IGLV4-3A0A075B6K6 122 aa12.44□□□□□ -0.42
TCOF1-206ENST00000445265 TINCRA0A1B0GVN0 87 aa12.44□□□□□ -0.42
TCOF1-206ENST00000445265 MAP6D1Q9H9H5 199 aa12.44□□□□□ -0.42
TCOF1-206ENST00000445265 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
TCOF1-206ENST00000445265 TMEM223A0PJW6 202 aa12.43□□□□□ -0.42
TCOF1-206ENST00000445265 CEMP1Q6PRD7 247 aaPredicted RBP12.43□□□□□ -0.42
TCOF1-206ENST00000445265 C5orf42Q9H799 3197 aa12.43□□□□□ -0.42
TCOF1-206ENST00000445265 MIAQ16674 131 aa12.43□□□□□ -0.42
TCOF1-206ENST00000445265 NXPH4O95158 308 aa12.42□□□□□ -0.42
TCOF1-206ENST00000445265 DAND5Q8N907 189 aa12.42□□□□□ -0.42
TCOF1-206ENST00000445265 PSMB8P28062 276 aa12.42□□□□□ -0.42
TCOF1-206ENST00000445265 Q6ZUT4 128 aa12.42□□□□□ -0.42
TCOF1-206ENST00000445265 IGLV1-40P01703 118 aa12.42□□□□□ -0.42
TCOF1-206ENST00000445265 P0DMU3 169 aa12.41□□□□□ -0.42
TCOF1-206ENST00000445265 FAM231AP0DMU4 169 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms