RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 PLNP26678 52 aa11.39□□□□□ -0.59
SNX13-204ENST00000444712 UFSP1Q6NVU6 142 aa11.39□□□□□ -0.59
SNX13-204ENST00000444712 NF1P21359 2839 aa11.39□□□□□ -0.59
SNX13-204ENST00000444712 I3L3M4 83 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 CFAP126Q5VTH2 177 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 IL17DQ8TAD2 202 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 CUBNO60494 3623 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 RS1O15537 224 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 RNASE8Q8TDE3 154 aaKnown RBP11.38□□□□□ -0.59
SNX13-204ENST00000444712 TMEM141Q96I45 108 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 OTOGQ6ZRI0 2925 aa11.38□□□□□ -0.59
SNX13-204ENST00000444712 NEGR1Q7Z3B1 354 aa11.37□□□□□ -0.59
SNX13-204ENST00000444712 GTSCR1Q86UQ5 136 aa11.37□□□□□ -0.59
SNX13-204ENST00000444712 DNAJC30Q96LL9 226 aa11.37□□□□□ -0.59
SNX13-204ENST00000444712 NACAE9PAV3 2078 aa11.37□□□□□ -0.59
SNX13-204ENST00000444712 F8VRH5 84 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 C16orf74Q96GX8 76 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 TIMM17AQ99595 171 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 CITED1Q99966 193 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 MRPL16Q9NX20 251 aaKnown RBP11.36□□□□□ -0.59
SNX13-204ENST00000444712 TP53TG1Q9Y2A0 90 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 PRM2P04554 102 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 ANKRD39Q53RE8 183 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.36□□□□□ -0.59
SNX13-204ENST00000444712 NEXN-AS1Q8NBZ9 246 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 TNFRSF18Q9Y5U5 241 aa11.36□□□□□ -0.59
SNX13-204ENST00000444712 IGHV3-53P01767 116 aa11.35□□□□□ -0.59
SNX13-204ENST00000444712 RPL35AP18077 110 aaKnown RBP11.35□□□□□ -0.59
SNX13-204ENST00000444712 AZU1P20160 251 aa11.35□□□□□ -0.59
SNX13-204ENST00000444712 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
SNX13-204ENST00000444712 DLEU1O43261 78 aa11.35□□□□□ -0.59
SNX13-204ENST00000444712 STPG4Q8N801 248 aa11.35□□□□□ -0.59
SNX13-204ENST00000444712 BAALCQ8WXS3 180 aa11.35□□□□□ -0.59
SNX13-204ENST00000444712 WFDC10AQ9H1F0 79 aa11.35□□□□□ -0.59
SNX13-204ENST00000444712 CHTOPQ9Y3Y2 248 aaKnown RBP11.35□□□□□ -0.59
SNX13-204ENST00000444712 IGHV3-73A0A0B4J1V6 119 aa11.34□□□□□ -0.59
SNX13-204ENST00000444712 GIG44P09565 113 aaPredicted RBP11.34□□□□□ -0.59
SNX13-204ENST00000444712 HHLA3Q9XRX5 114 aa11.34□□□□□ -0.59
SNX13-204ENST00000444712 SETXQ7Z333 2677 aaKnown RBP11.34□□□□□ -0.59
SNX13-204ENST00000444712 DAZ2Q13117 558 aaKnown RBP11.33□□□□□ -0.6
SNX13-204ENST00000444712 PAPPA-AS1Q5QFB9 102 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 TRGV1A0A0A0MS02 117 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 IGIPA6NJ69 53 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 CIDEAO60543 219 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 TSHBP01222 138 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 BATFQ16520 125 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 COL5A1-AS1Q5SY13 56 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 BOD1L2Q8IYS8 172 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 OR4C5Q8NGB2 326 aa11.33□□□□□ -0.6
SNX13-204ENST00000444712 NSD1Q96L73 2696 aaPredicted RBP11.33□□□□□ -0.6
SNX13-204ENST00000444712 NOTCH2Q04721 2471 aa11.32□□□□□ -0.6
SNX13-204ENST00000444712 SIVA1O15304 175 aa11.32□□□□□ -0.6
SNX13-204ENST00000444712 RRN3P1Q2M238 152 aa11.32□□□□□ -0.6
SNX13-204ENST00000444712 ZC2HC1BQ5TFG8 222 aa11.32□□□□□ -0.6
SNX13-204ENST00000444712 C12orf54Q6X4T0 127 aa11.32□□□□□ -0.6
SNX13-204ENST00000444712 CSNK1G2-AS1Q8NCQ2 148 aa11.32□□□□□ -0.6
SNX13-204ENST00000444712 FN1P02751 2386 aaKnown RBP11.32□□□□□ -0.6
SNX13-204ENST00000444712 TRAV4A0A0B4J268 109 aa11.31□□□□□ -0.6
SNX13-204ENST00000444712 FGF6P10767 208 aa11.31□□□□□ -0.6
SNX13-204ENST00000444712 NMUP48645 174 aa11.31□□□□□ -0.6
SNX13-204ENST00000444712 PMVKQ15126 192 aa11.31□□□□□ -0.6
SNX13-204ENST00000444712 C20orf203Q8NBC4 194 aa11.31□□□□□ -0.6
SNX13-204ENST00000444712 A0A1B0GV90 55 aa11.3□□□□□ -0.6
SNX13-204ENST00000444712 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
SNX13-204ENST00000444712 RPL39P62891 51 aaKnown RBP11.3□□□□□ -0.6
SNX13-204ENST00000444712 LURAP1LQ8IV03 231 aa11.3□□□□□ -0.6
SNX13-204ENST00000444712 NPSP0C0P6 89 aa11.29□□□□□ -0.6
SNX13-204ENST00000444712 HINT1P49773 126 aaPredicted RBP11.29□□□□□ -0.6
SNX13-204ENST00000444712 TMEM97Q5BJF2 176 aa11.29□□□□□ -0.6
SNX13-204ENST00000444712 FLNBO75369 2602 aaKnown RBP11.29□□□□□ -0.6
SNX13-204ENST00000444712 TRBV10-1A0A0K0K1A3 114 aa11.28□□□□□ -0.6
SNX13-204ENST00000444712 OVOL2Q9BRP0 275 aa11.28□□□□□ -0.6
SNX13-204ENST00000444712 C2CD3Q4AC94 2353 aa11.28□□□□□ -0.6
SNX13-204ENST00000444712 SETD2Q9BYW2 2564 aaPredicted RBP11.28□□□□□ -0.6
SNX13-204ENST00000444712 P0DMU3 169 aa11.28□□□□□ -0.6
SNX13-204ENST00000444712 FAM231AP0DMU4 169 aa11.28□□□□□ -0.6
SNX13-204ENST00000444712 FAM231CP0DMU5 169 aa11.28□□□□□ -0.6
SNX13-204ENST00000444712 NOP10Q9NPE3 64 aaKnown RBP11.28□□□□□ -0.6
SNX13-204ENST00000444712 Q6ZSN1 163 aa11.27□□□□□ -0.61
SNX13-204ENST00000444712 Q6ZTI0 123 aa11.27□□□□□ -0.61
SNX13-204ENST00000444712 C2orf91Q6ZV80 131 aa11.27□□□□□ -0.61
SNX13-204ENST00000444712 PYGO1Q9Y3Y4 419 aa11.27□□□□□ -0.61
SNX13-204ENST00000444712 CRYBA4P53673 196 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 CST9LQ9H4G1 147 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 PLAC8L1A1L4L8 177 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 K7EQD1 137 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 COTL1Q14019 142 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 MPV17L2Q567V2 206 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 WFDC9Q8NEX5 89 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 TP73-AS1Q9UF72 201 aa11.26□□□□□ -0.61
SNX13-204ENST00000444712 HIVEP1P15822 2718 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 RPL36AP83881 106 aaKnown RBP11.25□□□□□ -0.61
SNX13-204ENST00000444712 RPL36ALQ969Q0 106 aaKnown RBP11.25□□□□□ -0.61
SNX13-204ENST00000444712 ZNF479Q96JC4 524 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 HIGD1BQ9P298 99 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 TRBV7-3A0A075B6L6 115 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 SMIM9A6NGZ8 99 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 TCTAP57738 103 aa11.25□□□□□ -0.61
SNX13-204ENST00000444712 HERVK_113P61574 105 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms