RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 CLTCL1P53675 1640 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 CEP162Q5TB80 1403 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 DOCK10Q96BY6 2186 aa2.42□□□□□ -2.02
TM9SF3-202ENST00000443638 E9PCH4 1651 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 USP54Q70EL1 1684 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 TRBV6-8A0A0A6YYG3 113 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 FAM24AA6NFZ4 105 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 OOSP1A8MZH6 123 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 TMEM262E9PQX1 116 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 SNCGO76070 127 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 NDUFB6O95139 128 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 UBA52P62987 128 aaKnown RBP2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 C12orf73Q69YU5 71 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 PRO3102Q9H379 93 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 TMEM242Q9NWH2 141 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 AP4S1Q9Y587 144 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 BAZ2BQ9UIF8 2168 aaKnown RBP2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 EEA1Q15075 1411 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 NOTCH2Q04721 2471 aa2.41□□□□□ -2.02
TM9SF3-202ENST00000443638 HELZP42694 1942 aaKnown RBP2.4□□□□□ -2.02
TM9SF3-202ENST00000443638 MYLKQ15746 1914 aa2.4□□□□□ -2.02
TM9SF3-202ENST00000443638 IFT172Q9UG01 1749 aa2.4□□□□□ -2.02
TM9SF3-202ENST00000443638 TOGARAM1Q9Y4F4 1720 aa2.4□□□□□ -2.02
TM9SF3-202ENST00000443638 CCL16O15467 120 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 PIPP12273 146 aaPredicted RBP2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 KRTAP13-4Q3LI77 160 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 SLC25A26Q70HW3 274 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 OR10AG1Q8NH19 301 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 LINC00052Q96N35 136 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 RGPD5Q99666 1765 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 MICAL3Q7RTP6 2002 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 ARFGEF1Q9Y6D6 1849 aa2.4□□□□□ -2.03
TM9SF3-202ENST00000443638 ITSN1Q15811 1721 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 IQGAP3Q86VI3 1631 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 PAPPA2Q9BXP8 1791 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 AKAP11Q9UKA4 1901 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 TRBV6-5A0A0K0K1A5 114 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 IGHV3-33P01772 117 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 LINC00032P0C843 101 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 C10orf105Q8TEF2 133 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 DYNLRB2Q8TF09 96 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 DPY30Q9C005 99 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 WNK3Q9BYP7 1800 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 VCANP13611 3396 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 LY75O60449 1722 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 TIAM2Q8IVF5 1701 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 CEP290O15078 2479 aa2.39□□□□□ -2.03
TM9SF3-202ENST00000443638 SCN11AQ9UI33 1791 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 PHIPQ8WWQ0 1821 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 J3QRE1 110 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 PIRTP0C851 137 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 ADCYAP1P18509 176 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 SPANXN1Q5VSR9 72 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 ZNF431Q8TF32 576 aaPredicted RBP2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 TSKUQ8WUA8 353 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 TMEM106BQ9NUM4 274 aa2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 KIAA0100Q14667 2235 aaKnown RBP2.38□□□□□ -2.03
TM9SF3-202ENST00000443638 MUC4Q99102 2169 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 ANKRD36BQ8N2N9 1353 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 SCN3AQ9NY46 2000 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 MGAMO43451 1857 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 UBR3Q6ZT12 1888 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 RANBP2P49792 3224 aaKnown RBP2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 DAPK1P53355 1430 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 TRAV2A0A0B4J234 112 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 PIGBOS1A0A0B4J2F0 54 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 KRTAP6-3Q3LI67 103 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 DSCR8Q96T75 97 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 VAMP8Q9BV40 100 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 ORMDL1Q9P0S3 153 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 SPTBN5Q9NRC6 3674 aaKnown RBP2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 C5P01031 1676 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 ABCC6O95255 1503 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 C4BP0C0L5 1744 aa2.37□□□□□ -2.03
TM9SF3-202ENST00000443638 ANKARQ7Z5J8 1434 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 ANKRD50Q9ULJ7 1429 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 COX7CP15954 63 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 ATP5EP56381 51 aaPredicted RBP2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 Q8N8P6 123 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 ZCCHC13Q8WW36 166 aaKnown RBP2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 REG4Q9BYZ8 158 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 PRUNE2Q8WUY3 3088 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 C4AP0C0L4 1744 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 FREM1Q5H8C1 2179 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 BRCA2P51587 3418 aa2.36□□□□□ -2.03
TM9SF3-202ENST00000443638 EYSQ5T1H1 3165 aa2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 TRPM7Q96QT4 1865 aa2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 DOT1LQ8TEK3 1739 aa2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 LAMA2P24043 3122 aaKnown RBP2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 DCDP81605 110 aaKnown RBP2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 C15orf53Q8NAA6 179 aa2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 KIAA1549Q9HCM3 1950 aa2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 TTC28Q96AY4 2481 aa2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 RBBP6Q7Z6E9 1792 aaKnown RBP2.35□□□□□ -2.03
TM9SF3-202ENST00000443638 MCM3APO60318 1980 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 PPLO60437 1756 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 BAHCC1Q9P281 2608 aa2.34□□□□□ -2.03
TM9SF3-202ENST00000443638 UBE2L5PA0A1B0GUS4 154 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms