RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ATRAIDQ6UW56 229 aa7.74□□□□□ -1.17
TTC28-203ENST00000442232 DAZAP1Q96EP5 407 aaKnown RBP7.74□□□□□ -1.17
TTC28-203ENST00000442232 HERC1Q15751 4861 aa7.74□□□□□ -1.17
TTC28-203ENST00000442232 MUC21A0A0G2JKD1 596 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 MUC21A0A140T8X8 626 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 RPL35P42766 123 aaKnown RBP7.73□□□□□ -1.17
TTC28-203ENST00000442232 LINC01620Q4KN68 170 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 MPV17L2Q567V2 206 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 TMUB2Q71RG4 321 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 SCXQ7RTU7 201 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 DNAJC30Q96LL9 226 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 MLST8Q9BVC4 326 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 TPPP3Q9BW30 176 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 GNG13Q9P2W3 67 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
TTC28-203ENST00000442232 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
TTC28-203ENST00000442232 TRBV25-1A0A075B6N4 114 aa7.72□□□□□ -1.17
TTC28-203ENST00000442232 H7C1H1 209 aa7.72□□□□□ -1.17
TTC28-203ENST00000442232 HLA-DQA1P01909 254 aa7.72□□□□□ -1.17
TTC28-203ENST00000442232 MGPP08493 103 aa7.72□□□□□ -1.17
TTC28-203ENST00000442232 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
TTC28-203ENST00000442232 MIAQ16674 131 aa7.72□□□□□ -1.17
TTC28-203ENST00000442232 EIF5AL1Q6IS14 154 aaKnown RBP7.72□□□□□ -1.17
TTC28-203ENST00000442232 DEFB104AQ8WTQ1 72 aa7.72□□□□□ -1.17
TTC28-203ENST00000442232 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
TTC28-203ENST00000442232 XKRY2A2RUG3 117 aa7.71□□□□□ -1.18
TTC28-203ENST00000442232 IFNA1P01562 189 aa7.71□□□□□ -1.18
TTC28-203ENST00000442232 DERL1Q9BUN8 251 aa7.71□□□□□ -1.18
TTC28-203ENST00000442232 CHAC1Q9BUX1 264 aa7.71□□□□□ -1.18
TTC28-203ENST00000442232 VAX2Q9UIW0 290 aa7.71□□□□□ -1.18
TTC28-203ENST00000442232 IGHV1-24A0A0C4DH33 117 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 RAB5CP51148 216 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 CACNG7P62955 275 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 CENPWQ5EE01 88 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 ENHOQ6UWT2 76 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 FER1L6-AS1Q8NA97 138 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 C11orf52Q96A22 123 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 BIN3Q9NQY0 253 aa7.7□□□□□ -1.18
TTC28-203ENST00000442232 USP17L23D6RBM5 183 aa7.69□□□□□ -1.18
TTC28-203ENST00000442232 GNG4P50150 75 aa7.69□□□□□ -1.18
TTC28-203ENST00000442232 GAGE6Q13070 117 aa7.69□□□□□ -1.18
TTC28-203ENST00000442232 CLPSL2Q6UWE3 100 aa7.69□□□□□ -1.18
TTC28-203ENST00000442232 OR2D3Q8NGH3 330 aa7.69□□□□□ -1.18
TTC28-203ENST00000442232 PDE6DO43924 150 aa7.68□□□□□ -1.18
TTC28-203ENST00000442232 IGLV2-8P01709 118 aa7.68□□□□□ -1.18
TTC28-203ENST00000442232 P01737 135 aa7.68□□□□□ -1.18
TTC28-203ENST00000442232 TRGC1P0CF51 173 aa7.68□□□□□ -1.18
TTC28-203ENST00000442232 GZMBP10144 247 aa7.68□□□□□ -1.18
TTC28-203ENST00000442232 RBX1P62877 108 aa7.68□□□□□ -1.18
TTC28-203ENST00000442232 SMIM12Q96EX1 92 aa7.68□□□□□ -1.18
TTC28-203ENST00000442232 TRAV1-1A0A0B4J248 108 aa7.67□□□□□ -1.18
TTC28-203ENST00000442232 F2Z2F3 143 aa7.67□□□□□ -1.18
TTC28-203ENST00000442232 CCL20P78556 96 aa7.67□□□□□ -1.18
TTC28-203ENST00000442232 IQCJQ1A5X6 159 aa7.67□□□□□ -1.18
TTC28-203ENST00000442232 LINC00269Q8N2A0 174 aa7.67□□□□□ -1.18
TTC28-203ENST00000442232 CIRBP-AS1Q8TBR5 109 aa7.67□□□□□ -1.18
TTC28-203ENST00000442232 KIF25-AS1Q9Y6Z4 181 aa7.67□□□□□ -1.18
TTC28-203ENST00000442232 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
TTC28-203ENST00000442232 UBE2L6O14933 153 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 IGLC6P0CF74 106 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 MEF2BQ02080 365 aaPredicted RBP7.66□□□□□ -1.18
TTC28-203ENST00000442232 SUMO4Q6EEV6 95 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 DGAT2L7PQ6IED9 249 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 RASL11AQ6T310 242 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 NTM-AS1Q6ZSK4 140 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 TMEM243Q9BU79 118 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 PRR34Q9NV39 138 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 MED9Q9NWA0 146 aa7.66□□□□□ -1.18
TTC28-203ENST00000442232 M0QY20 66 aa7.65□□□□□ -1.18
TTC28-203ENST00000442232 SULT1A2P50226 295 aa7.65□□□□□ -1.18
TTC28-203ENST00000442232 NKX2-5P52952 324 aaPredicted RBP7.65□□□□□ -1.18
TTC28-203ENST00000442232 REG3AQ06141 175 aa7.65□□□□□ -1.18
TTC28-203ENST00000442232 DPH3P1Q9H4G8 78 aa7.65□□□□□ -1.18
TTC28-203ENST00000442232 IGLV10-54A0A075B6I4 117 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 TRAV8-4A0A0B4J246 113 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 RAB19A4D1S5 217 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 C19orf71A6NCJ1 209 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 PRSS1P07477 247 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 BCL2P10415 239 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 TAGLN2P37802 199 aaKnown RBP7.64□□□□□ -1.19
TTC28-203ENST00000442232 RPL37AP61513 92 aaKnown RBP7.64□□□□□ -1.19
TTC28-203ENST00000442232 WDR73Q6P4I2 378 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 LYZL1Q6UWQ5 148 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 CLRN3Q8NCR9 226 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 AP5S1Q9NUS5 200 aa7.64□□□□□ -1.19
TTC28-203ENST00000442232 hDV102S1A0JD36 115 aa7.63□□□□□ -1.19
TTC28-203ENST00000442232 AMTP48728 403 aa7.63□□□□□ -1.19
TTC28-203ENST00000442232 COTL1Q14019 142 aa7.63□□□□□ -1.19
TTC28-203ENST00000442232 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
TTC28-203ENST00000442232 PGLYRP4Q96LB8 373 aa7.63□□□□□ -1.19
TTC28-203ENST00000442232 NIT2Q9NQR4 276 aa7.63□□□□□ -1.19
TTC28-203ENST00000442232 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.62□□□□□ -1.19
TTC28-203ENST00000442232 NTF3P20783 257 aa7.62□□□□□ -1.19
TTC28-203ENST00000442232 TWIST1Q15672 202 aa7.62□□□□□ -1.19
TTC28-203ENST00000442232 SLC51BQ86UW2 128 aa7.62□□□□□ -1.19
TTC28-203ENST00000442232 C9orf163Q8N9P6 203 aa7.62□□□□□ -1.19
TTC28-203ENST00000442232 A0A1B0GUV1 79 aa7.61□□□□□ -1.19
TTC28-203ENST00000442232 OXTP01178 125 aa7.61□□□□□ -1.19
TTC28-203ENST00000442232 CTRLP40313 264 aa7.61□□□□□ -1.19
TTC28-203ENST00000442232 RPP21Q9H633 154 aaKnown RBP7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms