RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 FOXI1Q12951 378 aa13.65□□□□□ -0.22
PTPRJ-202ENST00000440289 IGHV4-30-2A0A087WSY4 118 aa13.65□□□□□ -0.22
PTPRJ-202ENST00000440289 J3QQQ9 107 aa13.65□□□□□ -0.22
PTPRJ-202ENST00000440289 IGLV4-69A0A075B6H9 119 aa13.65□□□□□ -0.23
PTPRJ-202ENST00000440289 IGHV4-4A0A075B6R2 117 aa13.65□□□□□ -0.23
PTPRJ-202ENST00000440289 IGHV3-38A0A0C4DH36 116 aa13.65□□□□□ -0.23
PTPRJ-202ENST00000440289 A0A0J9YY99 117 aa13.65□□□□□ -0.23
PTPRJ-202ENST00000440289 ACANP16112 2415 aa13.64□□□□□ -0.23
PTPRJ-202ENST00000440289 A4D1N5 150 aa13.64□□□□□ -0.23
PTPRJ-202ENST00000440289 DEFB136Q30KP8 78 aa13.64□□□□□ -0.23
PTPRJ-202ENST00000440289 CCL19Q99731 98 aa13.64□□□□□ -0.23
PTPRJ-202ENST00000440289 NBPF19A0A087WUL8 3843 aa13.64□□□□□ -0.23
PTPRJ-202ENST00000440289 ID1P41134 155 aa13.64□□□□□ -0.23
PTPRJ-202ENST00000440289 PRRC2AP48634 2157 aaKnown RBP13.64□□□□□ -0.23
PTPRJ-202ENST00000440289 IGHV3OR16-12A0A075B7B8 117 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 NDUFA11Q86Y39 141 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 TRAV8-3A0A0A6YYJ7 113 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 IGHV4-59P01825 116 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 PRO0461Q9UI25 63 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 IGHV3-16A0A0C4DH30 117 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 AVPP01185 164 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 CFC1BP0CG36 223 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 CFC1P0CG37 223 aa13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 CRIP2P52943 208 aaPredicted RBP13.63□□□□□ -0.23
PTPRJ-202ENST00000440289 SOCS3O14543 225 aa13.62□□□□□ -0.23
PTPRJ-202ENST00000440289 PIMREGQ9BSJ6 248 aa13.62□□□□□ -0.23
PTPRJ-202ENST00000440289 ATP6V0BQ99437 205 aa13.62□□□□□ -0.23
PTPRJ-202ENST00000440289 DAND5Q8N907 189 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 C1QTNF4Q9BXJ3 329 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 VCX2Q9H322 139 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 Q9UF83 564 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 A0A1B0GV72 72 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 CFAP126Q5VTH2 177 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 Q6ZSV7 163 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 CLUHP3Q96NS8 147 aa13.61□□□□□ -0.23
PTPRJ-202ENST00000440289 CHD6Q8TD26 2715 aa13.6□□□□□ -0.23
PTPRJ-202ENST00000440289 A8MWV9 139 aa13.6□□□□□ -0.23
PTPRJ-202ENST00000440289 ZNF625Q96I27 306 aaPredicted RBP13.6□□□□□ -0.23
PTPRJ-202ENST00000440289 AKAP9Q99996 3911 aa13.6□□□□□ -0.23
PTPRJ-202ENST00000440289 LENEPQ9Y5L5 61 aa13.6□□□□□ -0.23
PTPRJ-202ENST00000440289 IGIPA6NJ69 53 aa13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 CD28P10747 220 aa13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 FHL3Q13643 280 aa13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 MUSTN1Q8IVN3 82 aa13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 ANKRD29Q8N6D5 301 aa13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 C11orf44Q8N8P7 122 aa13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 LINC00315P59091 139 aa13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 SNRPD3P62318 126 aaKnown RBP13.59□□□□□ -0.23
PTPRJ-202ENST00000440289 COX6B1P14854 86 aa13.58□□□□□ -0.24
PTPRJ-202ENST00000440289 XGP55808 180 aa13.58□□□□□ -0.24
PTPRJ-202ENST00000440289 PRO1854Q9UHT4 67 aa13.58□□□□□ -0.24
PTPRJ-202ENST00000440289 PPP1R17O96001 155 aa13.58□□□□□ -0.24
PTPRJ-202ENST00000440289 USMG5Q96IX5 58 aa13.58□□□□□ -0.24
PTPRJ-202ENST00000440289 PRSS47A8MTI9 375 aa13.57□□□□□ -0.24
PTPRJ-202ENST00000440289 FN1P02751 2386 aaKnown RBP13.57□□□□□ -0.24
PTPRJ-202ENST00000440289 POLR2KP53803 58 aaKnown RBP13.57□□□□□ -0.24
PTPRJ-202ENST00000440289 GEMIN7Q9H840 131 aaKnown RBP13.57□□□□□ -0.24
PTPRJ-202ENST00000440289 TRAV26-1A0A087WT03 109 aa13.57□□□□□ -0.24
PTPRJ-202ENST00000440289 IGHG2P01859 326 aa13.57□□□□□ -0.24
PTPRJ-202ENST00000440289 KIF25-AS1Q9Y6Z4 181 aa13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 NOTCH2Q04721 2471 aa13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 IGKV2-29A2NJV5 120 aaPredicted RBP13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 IGHV3-30P01768 117 aa13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 IGHV3-30-5P0DP03 117 aa13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 C10orf126Q8N4M7 172 aa13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 ERG28Q9UKR5 140 aa13.56□□□□□ -0.24
PTPRJ-202ENST00000440289 USP24Q9UPU5 2620 aa13.55□□□□□ -0.24
PTPRJ-202ENST00000440289 UBE2D1P51668 147 aa13.55□□□□□ -0.24
PTPRJ-202ENST00000440289 ELANEP08246 267 aa13.55□□□□□ -0.24
PTPRJ-202ENST00000440289 DEFB112Q30KQ8 113 aa13.55□□□□□ -0.24
PTPRJ-202ENST00000440289 DCANP1Q8TF63 244 aa13.55□□□□□ -0.24
PTPRJ-202ENST00000440289 CARD19Q96LW7 228 aa13.55□□□□□ -0.24
PTPRJ-202ENST00000440289 IGHV1OR15-1A0A075B7D0 117 aa13.54□□□□□ -0.24
PTPRJ-202ENST00000440289 SLC25A20O43772 301 aa13.54□□□□□ -0.24
PTPRJ-202ENST00000440289 NTN5Q8WTR8 489 aaPredicted RBP13.54□□□□□ -0.24
PTPRJ-202ENST00000440289 SPATA25Q9BR10 227 aa13.54□□□□□ -0.24
PTPRJ-202ENST00000440289 DEFB131AP59861 70 aa13.53□□□□□ -0.24
PTPRJ-202ENST00000440289 M0QY20 66 aa13.53□□□□□ -0.24
PTPRJ-202ENST00000440289 MSMBP08118 114 aa13.53□□□□□ -0.24
PTPRJ-202ENST00000440289 LYRM7Q5U5X0 104 aa13.53□□□□□ -0.24
PTPRJ-202ENST00000440289 KLLNB2CW77 178 aa13.53□□□□□ -0.24
PTPRJ-202ENST00000440289 PAPPA-AS1Q5QFB9 102 aa13.53□□□□□ -0.24
PTPRJ-202ENST00000440289 C18orf65Q6ZTR6 163 aa13.52□□□□□ -0.24
PTPRJ-202ENST00000440289 SLC25A29Q8N8R3 303 aa13.52□□□□□ -0.24
PTPRJ-202ENST00000440289 CDIP1Q9H305 208 aa13.52□□□□□ -0.24
PTPRJ-202ENST00000440289 TEN1Q86WV5 123 aa13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 PPDPFLQ8WWR9 84 aa13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 TNFRSF18Q9Y5U5 241 aa13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 A6NDX4 124 aa13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 Q6ZUT4 128 aa13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 TRBV20-1A0A075B6N2 111 aa13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 ZNF22P17026 224 aaPredicted RBP13.51□□□□□ -0.25
PTPRJ-202ENST00000440289 IGHV4OR15-8A0A075B7B6 117 aa13.5□□□□□ -0.25
PTPRJ-202ENST00000440289 A0A087WW49 117 aa13.5□□□□□ -0.25
PTPRJ-202ENST00000440289 IGHV3-53P01767 116 aa13.5□□□□□ -0.25
PTPRJ-202ENST00000440289 TIMM21Q9BVV7 248 aa13.5□□□□□ -0.25
PTPRJ-202ENST00000440289 APRG1Q8IVJ8 170 aa13.5□□□□□ -0.25
PTPRJ-202ENST00000440289 RHODO00212 210 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms