RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
TNFRSF1A-204ENST00000440083 FCER1GP30273 86 aa10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 LINC00315P59091 139 aa10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 PKIAP61925 76 aa10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 LAGE3Q14657 143 aa10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 TEX43Q6ZNM6 134 aa10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 TMEM263Q8WUH6 116 aaKnown RBP10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 RNF183Q96D59 192 aa10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 VAMP8Q9BV40 100 aa10.47□□□□□ -0.73
TNFRSF1A-204ENST00000440083 IGLV2-18A0A075B6J9 118 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 SYS1-DBNDD2H3BUS1 97 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 H7C1H1 209 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 K7EMI3 77 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 RHODO00212 210 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 CRYGDP07320 174 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 ORMDL2Q53FV1 153 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 PET117Q6UWS5 81 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 LINC00173Q6ZV60 143 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 Q8N976 141 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 C16orf74Q96GX8 76 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 NDUFAF3Q9BU61 184 aa10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 MRPL16Q9NX20 251 aaKnown RBP10.46□□□□□ -0.73
TNFRSF1A-204ENST00000440083 A0A096LNJ9 63 aa10.45□□□□□ -0.74
TNFRSF1A-204ENST00000440083 H0Y8G0 127 aa10.45□□□□□ -0.74
TNFRSF1A-204ENST00000440083 TCAPO15273 167 aa10.45□□□□□ -0.74
TNFRSF1A-204ENST00000440083 PRM2P04554 102 aa10.45□□□□□ -0.74
TNFRSF1A-204ENST00000440083 NUDT3O95989 172 aa10.44□□□□□ -0.74
TNFRSF1A-204ENST00000440083 AZU1P20160 251 aa10.44□□□□□ -0.74
TNFRSF1A-204ENST00000440083 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
TNFRSF1A-204ENST00000440083 PRO1933Q9H354 126 aa10.44□□□□□ -0.74
TNFRSF1A-204ENST00000440083 EDA2RQ9HAV5 297 aa10.44□□□□□ -0.74
TNFRSF1A-204ENST00000440083 TP53TG1Q9Y2A0 90 aa10.44□□□□□ -0.74
TNFRSF1A-204ENST00000440083 TRGV1A0A0A0MS02 117 aa10.43□□□□□ -0.74
TNFRSF1A-204ENST00000440083 RRN3P1Q2M238 152 aa10.43□□□□□ -0.74
TNFRSF1A-204ENST00000440083 CSNK1G2-AS1Q8NCQ2 148 aa10.43□□□□□ -0.74
TNFRSF1A-204ENST00000440083 IL17DQ8TAD2 202 aa10.43□□□□□ -0.74
TNFRSF1A-204ENST00000440083 RNASE8Q8TDE3 154 aaKnown RBP10.43□□□□□ -0.74
TNFRSF1A-204ENST00000440083 IFI27L1Q96BM0 104 aa10.43□□□□□ -0.74
TNFRSF1A-204ENST00000440083 IGHV3-73A0A0B4J1V6 119 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 TRBV6-5A0A0K0K1A5 114 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 M0QY20 66 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 VCYO14598 125 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 RS1O15537 224 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 ATP5LO75964 103 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 G0S2P27469 103 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 OR11H2Q8NH07 326 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 WWC2-AS2Q96NR7 200 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 KIR2DL4Q99706 377 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 PAM16Q9Y3D7 125 aa10.42□□□□□ -0.74
TNFRSF1A-204ENST00000440083 A0A0J9YWU9 116 aa10.41□□□□□ -0.74
TNFRSF1A-204ENST00000440083 CFAP126Q5VTH2 177 aa10.41□□□□□ -0.74
TNFRSF1A-204ENST00000440083 ZNF705AQ6ZN79 300 aaPredicted RBP10.41□□□□□ -0.74
TNFRSF1A-204ENST00000440083 ZNF664Q8N3J9 261 aa10.41□□□□□ -0.74
TNFRSF1A-204ENST00000440083 C18orf15Q96N68 181 aa10.41□□□□□ -0.74
TNFRSF1A-204ENST00000440083 NACAE9PAV3 2078 aa10.41□□□□□ -0.74
TNFRSF1A-204ENST00000440083 SDHAF1A6NFY7 115 aa10.4□□□□□ -0.74
TNFRSF1A-204ENST00000440083 DEFB4AO15263 64 aa10.4□□□□□ -0.74
TNFRSF1A-204ENST00000440083 SPATA12Q7Z6I5 190 aa10.4□□□□□ -0.74
TNFRSF1A-204ENST00000440083 ATOH7Q8N100 152 aa10.4□□□□□ -0.74
TNFRSF1A-204ENST00000440083 OR4C5Q8NGB2 326 aa10.4□□□□□ -0.74
TNFRSF1A-204ENST00000440083 X6R8D5 127 aa10.4□□□□□ -0.74
TNFRSF1A-204ENST00000440083 HSBP1L1C9JCN9 74 aa10.39□□□□□ -0.75
TNFRSF1A-204ENST00000440083 LGALS9BQ3B8N2 356 aa10.39□□□□□ -0.75
TNFRSF1A-204ENST00000440083 SPATA45Q537H7 98 aa10.39□□□□□ -0.75
TNFRSF1A-204ENST00000440083 LINC01545Q5VT33 79 aa10.39□□□□□ -0.75
TNFRSF1A-204ENST00000440083 NEGR1Q7Z3B1 354 aa10.39□□□□□ -0.75
TNFRSF1A-204ENST00000440083 TNFRSF18Q9Y5U5 241 aa10.39□□□□□ -0.75
TNFRSF1A-204ENST00000440083 TRAV9-2A0A087WT02 112 aa10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 IGHV4-28A0A0C4DH34 117 aa10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 LINC01549A6NIU2 74 aa10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 POLR2KP53803 58 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 DAZ2Q13117 558 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 UFSP1Q6NVU6 142 aa10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 ZFP2Q6ZN57 461 aa10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 NOP10Q9NPE3 64 aaKnown RBP10.38□□□□□ -0.75
TNFRSF1A-204ENST00000440083 TRAV4A0A0B4J268 109 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 TRBV27A0A0K0K1C4 114 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 PRSS1P07477 247 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 RHOHQ15669 191 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 Q6ZN92 141 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 Q8NAQ8 132 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 TOMM6Q96B49 74 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 DNAJC30Q96LL9 226 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 CYSLTR1Q9Y271 337 aa10.37□□□□□ -0.75
TNFRSF1A-204ENST00000440083 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 I3L3M4 83 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 IGHV3-53P01767 116 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 DDTP30046 118 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 ZFAND6Q6FIF0 208 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 C2orf66Q6UXQ4 117 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 Q6ZTI0 123 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 SCGB3A1Q96QR1 104 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 PMCHL2Q9BQD1 86 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 STARD9Q9P2P6 4700 aa10.36□□□□□ -0.75
TNFRSF1A-204ENST00000440083 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
TNFRSF1A-204ENST00000440083 TRGV2A0A075B6R0 118 aa10.35□□□□□ -0.75
TNFRSF1A-204ENST00000440083 SMIM9A6NGZ8 99 aa10.35□□□□□ -0.75
TNFRSF1A-204ENST00000440083 MUC7Q8TAX7 377 aa10.35□□□□□ -0.75
TNFRSF1A-204ENST00000440083 DYNC2H1Q8NCM8 4307 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms