RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 A0A1W2PNU3 283 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-202ENST00000435070 LOXP28300 417 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-202ENST00000435070 ZNF474Q6S9Z5 364 aaPredicted RBP5.7□□□□□ -1.5
CPSF6-202ENST00000435070 SPTAN1Q13813 2472 aaKnown RBP5.7□□□□□ -1.5
CPSF6-202ENST00000435070 BUB3O43684 328 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 IGHG2P01859 326 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 PLA2G2AP14555 144 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 DEFB1P60022 68 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 TOMM6Q96B49 74 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 IGLV3-9A0A075B6K5 115 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 TRGV11A0A075B6L2 103 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 TRAV25A0A0B4J276 109 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 IGF1P05019 195 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 ZNF22P17026 224 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-202ENST00000435070 TEX36Q5VZQ5 186 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 CEMP1Q6PRD7 247 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-202ENST00000435070 TIMM23O14925 209 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 CRYGBP07316 175 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 MP68P56378 58 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 C2CD3Q4AC94 2353 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 TP53TG1Q9Y2A0 90 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 DMXL1Q9Y485 3027 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 C17orf100A8MU93 164 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 OPRPNQ99935 248 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-202ENST00000435070 EIF4EBP3O60516 100 aaPredicted RBP5.69□□□□□ -1.5
CPSF6-202ENST00000435070 Q6ZSV7 163 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 IGHV7-4-1A0A0J9YVY3 117 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 SLC25A29Q8N8R3 303 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 J3QQQ9 107 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 ACYP1P07311 99 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 DKK4Q9UBT3 224 aa5.69□□□□□ -1.5
CPSF6-202ENST00000435070 CRYGDP07320 174 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 CLEC2BQ92478 149 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 DSCR9P59020 149 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 PIP4P1Q86T03 277 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 LEPROTO15243 131 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 LINC00311Q8N616 119 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 CSDC2Q9Y534 153 aaKnown RBP5.68□□□□□ -1.5
CPSF6-202ENST00000435070 TRGV1A0A0A0MS02 117 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 LGALS9O00182 355 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 ZNF580Q9UK33 172 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 NACAE9PAV3 2078 aa5.68□□□□□ -1.5
CPSF6-202ENST00000435070 TRIAP1O43715 76 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 FANCD2OSQ96PS1 177 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 BUB1B-PAK6H3BSN5 160 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 TMEM178BH3BS89 294 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 SERTAD4-AS1Q5TG53 156 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 BRD3OSQ6XYD6 125 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 DSCR8Q96T75 97 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 NDPQ00604 133 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 MSRB2Q9Y3D2 182 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 IGLV4-69A0A075B6H9 119 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 RBAKDNA6NC62 111 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 Q6Q795 121 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 SEM1Q6ZVN7 128 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 ZNRF2Q8NHG8 242 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 MDFICQ9P1T7 246 aa5.67□□□□□ -1.5
CPSF6-202ENST00000435070 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.66□□□□□ -1.52e-7■■■■□ 22.4
CPSF6-202ENST00000435070 TRBV10-2A0A0K0K1G8 114 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 FAM110DQ8TAY7 271 aaPredicted RBP5.66□□□□□ -1.5
CPSF6-202ENST00000435070 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.66□□□□□ -1.5
CPSF6-202ENST00000435070 TSHBP01222 138 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 CFHR3Q02985 330 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 TMEM263Q8WUH6 116 aaKnown RBP5.66□□□□□ -1.5
CPSF6-202ENST00000435070 SLC50A1Q9BRV3 221 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 SVEP1Q4LDE5 3571 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 PTPRQQ9UMZ3 2332 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 F8W735 103 aaPredicted RBP5.66□□□□□ -1.5
CPSF6-202ENST00000435070 PRR9Q5T870 116 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 COX8CQ7Z4L0 72 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 A0A1B0GX51 115 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 CTSGP08311 255 aa5.66□□□□□ -1.5
CPSF6-202ENST00000435070 PRR30Q53SZ7 412 aaPredicted RBP5.65□□□□□ -1.5
CPSF6-202ENST00000435070 LAMA5O15230 3695 aa5.65□□□□□ -1.5
CPSF6-202ENST00000435070 A0A087WWL8 130 aa5.65□□□□□ -1.5
CPSF6-202ENST00000435070 TINCRA0A1B0GVN0 87 aa5.65□□□□□ -1.5
CPSF6-202ENST00000435070 HERVK_113P63121 156 aa5.65□□□□□ -1.5
CPSF6-202ENST00000435070 MAPK1IP1LQ8NDC0 245 aa5.65□□□□□ -1.5
CPSF6-202ENST00000435070 PRR15LQ9BU68 103 aa5.65□□□□□ -1.5
CPSF6-202ENST00000435070 PRRC2AP48634 2157 aaKnown RBP5.65□□□□□ -1.5
CPSF6-202ENST00000435070 GNRH2O43555 120 aa5.65□□□□□ -1.5
CPSF6-202ENST00000435070 H7C423 109 aa5.65□□□□□ -1.51
CPSF6-202ENST00000435070 IGLV1-47P01700 117 aa5.65□□□□□ -1.51
CPSF6-202ENST00000435070 ATOX1O00244 68 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 CMC4P56277 68 aaPredicted RBP5.64□□□□□ -1.51
CPSF6-202ENST00000435070 FAM19A5Q7Z5A7 132 aaPredicted RBP5.64□□□□□ -1.51
CPSF6-202ENST00000435070 NRGNQ92686 78 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 PSMG3-AS1Q96PY0 264 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 ZNF883P0CG24 379 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 LINC01356Q8N9X3 169 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 Q96MF0 132 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 ASH1LQ9NR48 2969 aaKnown RBP5.64□□□□□ -1.51
CPSF6-202ENST00000435070 RNF223E7ERA6 249 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 ZNF672Q499Z4 452 aaPredicted RBP5.64□□□□□ -1.51
CPSF6-202ENST00000435070 LRBAP50851 2863 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 IGLV11-55A0A075B6I3 123 aa5.64□□□□□ -1.51
CPSF6-202ENST00000435070 SMIM9A6NGZ8 99 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 DEFB130BP0DP73 79 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 DEFB130AP0DP74 79 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 CD59P13987 128 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms