RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 ZNRF2Q8NHG8 242 aa13.67□□□□□ -0.22
CHD1L-204ENST00000431239 TSPEAR-AS2P59090 65 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 CR1P17927 2039 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 TEX48A0A1B0GUV7 120 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 P0DMU3 169 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 FAM231AP0DMU4 169 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 FAM231CP0DMU5 169 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 DEFB131AP59861 70 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 ODF3Q96PU9 254 aa13.66□□□□□ -0.22
CHD1L-204ENST00000431239 RPL32P62910 135 aaKnown RBP13.65□□□□□ -0.22
CHD1L-204ENST00000431239 IGHV3-64A0A075B6Q5 118 aa13.65□□□□□ -0.22
CHD1L-204ENST00000431239 G3V4G9 280 aa13.65□□□□□ -0.22
CHD1L-204ENST00000431239 Q6YL49 198 aa13.65□□□□□ -0.22
CHD1L-204ENST00000431239 FOXI2Q6ZQN5 318 aa13.65□□□□□ -0.22
CHD1L-204ENST00000431239 NIPBLQ6KC79 2804 aaeCLIP13.65□□□□□ -0.23
CHD1L-204ENST00000431239 J3QLI3 93 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 ELANEP08246 267 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 IGHV4-31P0DP07 118 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 PROK1P58294 105 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 WFDC2Q14508 124 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 RRN3P1Q2M238 152 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 UBE2E2Q96LR5 201 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 HERVK_113P61574 105 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 BBC3Q96PG8 261 aaPredicted RBP13.64□□□□□ -0.23
CHD1L-204ENST00000431239 PGPEP1Q9NXJ5 209 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 APCP25054 2843 aa13.64□□□□□ -0.23
CHD1L-204ENST00000431239 TMEM89A2RUT3 159 aa13.63□□□□□ -0.23
CHD1L-204ENST00000431239 TMEM141Q96I45 108 aa13.63□□□□□ -0.23
CHD1L-204ENST00000431239 TIMM17AQ99595 171 aa13.63□□□□□ -0.23
CHD1L-204ENST00000431239 NBPF19A0A087WUL8 3843 aa13.63□□□□□ -0.23
CHD1L-204ENST00000431239 APOMO95445 188 aa13.63□□□□□ -0.23
CHD1L-204ENST00000431239 MRPL16Q9NX20 251 aaKnown RBP13.63□□□□□ -0.23
CHD1L-204ENST00000431239 PRRC2AP48634 2157 aaKnown RBP13.63□□□□□ -0.23
CHD1L-204ENST00000431239 TRBV6-5A0A0K0K1A5 114 aa13.62□□□□□ -0.23
CHD1L-204ENST00000431239 TRPT1Q86TN4 253 aaKnown RBP13.62□□□□□ -0.23
CHD1L-204ENST00000431239 ITPR3Q14573 2671 aa13.61□□□□□ -0.23
CHD1L-204ENST00000431239 LINC01549A6NIU2 74 aa13.61□□□□□ -0.23
CHD1L-204ENST00000431239 NACAE9PAV3 2078 aa13.61□□□□□ -0.23
CHD1L-204ENST00000431239 SH2D6Q7Z4S9 175 aa13.6□□□□□ -0.23
CHD1L-204ENST00000431239 Q9UF83 564 aa13.6□□□□□ -0.23
CHD1L-204ENST00000431239 TMEM61Q8N0U2 210 aa13.6□□□□□ -0.23
CHD1L-204ENST00000431239 TRGV11A0A075B6L2 103 aa13.6□□□□□ -0.23
CHD1L-204ENST00000431239 LINC01619G3V211 115 aa13.6□□□□□ -0.23
CHD1L-204ENST00000431239 Q5PR19 223 aa13.6□□□□□ -0.23
CHD1L-204ENST00000431239 PAPPA-AS1Q5QFB9 102 aa13.6□□□□□ -0.23
CHD1L-204ENST00000431239 A0A0J9YY99 117 aa13.59□□□□□ -0.23
CHD1L-204ENST00000431239 RBMY1BA6NDE4 496 aaKnown RBP13.59□□□□□ -0.23
CHD1L-204ENST00000431239 RBMY1EA6NEQ0 496 aaKnown RBP13.59□□□□□ -0.23
CHD1L-204ENST00000431239 RBMY1DP0C7P1 496 aaKnown RBP13.59□□□□□ -0.23
CHD1L-204ENST00000431239 A0A1B0GWB2 263 aa13.59□□□□□ -0.23
CHD1L-204ENST00000431239 ETDBQ3ZM63 59 aa13.59□□□□□ -0.23
CHD1L-204ENST00000431239 RNASE13Q5GAN3 156 aaKnown RBP13.59□□□□□ -0.23
CHD1L-204ENST00000431239 JMJD1CQ15652 2540 aa13.59□□□□□ -0.23
CHD1L-204ENST00000431239 AKAP9Q99996 3911 aa13.58□□□□□ -0.23
CHD1L-204ENST00000431239 NSUN5P1Q3KNT7 163 aa13.58□□□□□ -0.24
CHD1L-204ENST00000431239 CEMP1Q6PRD7 247 aaPredicted RBP13.58□□□□□ -0.24
CHD1L-204ENST00000431239 LOC107984156A0A0G2JMH3 177 aa13.58□□□□□ -0.24
CHD1L-204ENST00000431239 I3L3M4 83 aa13.58□□□□□ -0.24
CHD1L-204ENST00000431239 FSHBP01225 129 aa13.58□□□□□ -0.24
CHD1L-204ENST00000431239 ARL17AQ8IVW1 177 aa13.58□□□□□ -0.24
CHD1L-204ENST00000431239 FLNAP21333 2647 aaKnown RBP13.58□□□□□ -0.24
CHD1L-204ENST00000431239 J3QQQ9 107 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 COTL1Q14019 142 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 C11orf44Q8N8P7 122 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 C20orf203Q8NBC4 194 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 A0A0J9YXV3 536 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 TMEM238LA0A1B0GVL6 79 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 A6NJY4 79 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 LGALS3P17931 250 aaKnown RBP13.57□□□□□ -0.24
CHD1L-204ENST00000431239 Q96MF0 132 aa13.57□□□□□ -0.24
CHD1L-204ENST00000431239 H3BMM0 161 aa13.56□□□□□ -0.24
CHD1L-204ENST00000431239 RHOHQ15669 191 aa13.56□□□□□ -0.24
CHD1L-204ENST00000431239 SPAG8Q99932 426 aaPredicted RBP13.56□□□□□ -0.24
CHD1L-204ENST00000431239 GAGE13Q4V321 117 aa13.56□□□□□ -0.24
CHD1L-204ENST00000431239 TSPAN13O95857 204 aa13.55□□□□□ -0.24
CHD1L-204ENST00000431239 DLX4Q92988 240 aaPredicted RBP13.55□□□□□ -0.24
CHD1L-204ENST00000431239 SPANXB1Q9NS25 103 aaPredicted RBP13.55□□□□□ -0.24
CHD1L-204ENST00000431239 IGLV4-3A0A075B6K6 122 aa13.54□□□□□ -0.24
CHD1L-204ENST00000431239 F8W1H4 67 aa13.54□□□□□ -0.24
CHD1L-204ENST00000431239 UBE2D1P51668 147 aa13.54□□□□□ -0.24
CHD1L-204ENST00000431239 DYNLRB2Q8TF09 96 aa13.54□□□□□ -0.24
CHD1L-204ENST00000431239 VCX2Q9H322 139 aa13.54□□□□□ -0.24
CHD1L-204ENST00000431239 C2CD3Q4AC94 2353 aa13.54□□□□□ -0.24
CHD1L-204ENST00000431239 Q6ZSN1 163 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 AMELXQ99217 191 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 MTORP42345 2549 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 ACANP16112 2415 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 ADARB2-AS1A8MUL3 147 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 CD28P10747 220 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 PSMB2P49721 201 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 RNF152Q8N8N0 203 aa13.53□□□□□ -0.24
CHD1L-204ENST00000431239 IGHV3-30P01768 117 aa13.52□□□□□ -0.24
CHD1L-204ENST00000431239 IGHV3-30-5P0DP03 117 aa13.52□□□□□ -0.24
CHD1L-204ENST00000431239 ZNF22P17026 224 aaPredicted RBP13.52□□□□□ -0.24
CHD1L-204ENST00000431239 DEFB113Q30KQ7 82 aa13.52□□□□□ -0.24
CHD1L-204ENST00000431239 IGHV3-38A0A0C4DH36 116 aa13.52□□□□□ -0.25
CHD1L-204ENST00000431239 A0A1W2PRX2 142 aa13.52□□□□□ -0.25
CHD1L-204ENST00000431239 MAP6D1Q9H9H5 199 aa13.52□□□□□ -0.25
CHD1L-204ENST00000431239 TNFRSF18Q9Y5U5 241 aa13.52□□□□□ -0.25
CHD1L-204ENST00000431239 TMEM223A0PJW6 202 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms