RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 OR10J3Q5JRS4 329 aa11.71□□□□□ -0.53
CTSD-203ENST00000429746 A8MWL6 223 aa11.7□□□□□ -0.54
CTSD-203ENST00000429746 RPL36AP83881 106 aaKnown RBP11.7□□□□□ -0.54
CTSD-203ENST00000429746 NTM-AS1Q6ZSK4 140 aa11.7□□□□□ -0.54
CTSD-203ENST00000429746 TSKUQ8WUA8 353 aa11.7□□□□□ -0.54
CTSD-203ENST00000429746 RPL36ALQ969Q0 106 aaKnown RBP11.7□□□□□ -0.54
CTSD-203ENST00000429746 KRTAP17-1Q9BYP8 105 aa11.7□□□□□ -0.54
CTSD-203ENST00000429746 NAT8Q9UHE5 227 aa11.7□□□□□ -0.54
CTSD-203ENST00000429746 TRAV8-6A0A0B4J262 113 aa11.69□□□□□ -0.54
CTSD-203ENST00000429746 IBA57-AS1B1ANH7 110 aa11.69□□□□□ -0.54
CTSD-203ENST00000429746 CLLU1Q5K131 121 aa11.69□□□□□ -0.54
CTSD-203ENST00000429746 PGLYRP4Q96LB8 373 aa11.69□□□□□ -0.54
CTSD-203ENST00000429746 GFRA4Q9GZZ7 299 aa11.69□□□□□ -0.54
CTSD-203ENST00000429746 DPH3P1Q9H4G8 78 aa11.69□□□□□ -0.54
CTSD-203ENST00000429746 HSPG2P98160 4391 aa11.68□□□□□ -0.54
CTSD-203ENST00000429746 A0A087WWC5 75 aa11.68□□□□□ -0.54
CTSD-203ENST00000429746 F5H697 171 aa11.68□□□□□ -0.54
CTSD-203ENST00000429746 MGPP08493 103 aa11.68□□□□□ -0.54
CTSD-203ENST00000429746 TRGC1P0CF51 173 aa11.68□□□□□ -0.54
CTSD-203ENST00000429746 TWIST1Q15672 202 aa11.68□□□□□ -0.54
CTSD-203ENST00000429746 NIT1Q86X76 327 aa11.68□□□□□ -0.54
CTSD-203ENST00000429746 FAM231BA6NCW3 169 aa11.67□□□□□ -0.54
CTSD-203ENST00000429746 HIGD1CA8MV81 97 aa11.67□□□□□ -0.54
CTSD-203ENST00000429746 IGHV3-30P01768 117 aa11.67□□□□□ -0.54
CTSD-203ENST00000429746 IGHV3-33P01772 117 aa11.67□□□□□ -0.54
CTSD-203ENST00000429746 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
CTSD-203ENST00000429746 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
CTSD-203ENST00000429746 IGHV3-30-5P0DP03 117 aa11.67□□□□□ -0.54
CTSD-203ENST00000429746 TRAV9-2A0A087WT02 112 aa11.66□□□□□ -0.54
CTSD-203ENST00000429746 TRBV6-8A0A0A6YYG3 113 aa11.66□□□□□ -0.54
CTSD-203ENST00000429746 ADIRFQ15847 76 aa11.66□□□□□ -0.54
CTSD-203ENST00000429746 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
CTSD-203ENST00000429746 C10orf126Q8N4M7 172 aa11.66□□□□□ -0.54
CTSD-203ENST00000429746 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
CTSD-203ENST00000429746 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
CTSD-203ENST00000429746 TRAV26-2A0A0B4J265 109 aa11.65□□□□□ -0.54
CTSD-203ENST00000429746 C16orf90A8MZG2 172 aa11.65□□□□□ -0.54
CTSD-203ENST00000429746 KRTAP10-2P60368 255 aa11.65□□□□□ -0.54
CTSD-203ENST00000429746 RASL11AQ6T310 242 aa11.65□□□□□ -0.54
CTSD-203ENST00000429746 NUP35Q8NFH5 326 aa11.65□□□□□ -0.54
CTSD-203ENST00000429746 DNAJC30Q96LL9 226 aa11.65□□□□□ -0.54
CTSD-203ENST00000429746 DNAH8Q96JB1 4490 aa11.64□□□□□ -0.55
CTSD-203ENST00000429746 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
CTSD-203ENST00000429746 SMIM27A0A1W2PRY6 76 aa11.63□□□□□ -0.55
CTSD-203ENST00000429746 CDK2AP2O75956 126 aa11.63□□□□□ -0.55
CTSD-203ENST00000429746 LAGE3Q14657 143 aa11.63□□□□□ -0.55
CTSD-203ENST00000429746 RNF185Q96GF1 192 aa11.63□□□□□ -0.55
CTSD-203ENST00000429746 A0A1B0GUT8 65 aa11.62□□□□□ -0.55
CTSD-203ENST00000429746 LRCOL1A6NCL2 159 aa11.62□□□□□ -0.55
CTSD-203ENST00000429746 NFE4Q86UQ8 179 aa11.62□□□□□ -0.55
CTSD-203ENST00000429746 C15orf54Q8N8G6 183 aa11.62□□□□□ -0.55
CTSD-203ENST00000429746 NIT2Q9NQR4 276 aa11.62□□□□□ -0.55
CTSD-203ENST00000429746 H7C1H1 209 aa11.61□□□□□ -0.55
CTSD-203ENST00000429746 RAB14P61106 215 aa11.61□□□□□ -0.55
CTSD-203ENST00000429746 RPL39LQ96EH5 51 aaKnown RBP11.61□□□□□ -0.55
CTSD-203ENST00000429746 TMEM191AQ9H0A3 160 aa11.61□□□□□ -0.55
CTSD-203ENST00000429746 A0A087WTM6 91 aa11.6□□□□□ -0.55
CTSD-203ENST00000429746 ADCYAP1P18509 176 aa11.6□□□□□ -0.55
CTSD-203ENST00000429746 IQCJQ1A5X6 159 aa11.6□□□□□ -0.55
CTSD-203ENST00000429746 MPV17L2Q567V2 206 aa11.6□□□□□ -0.55
CTSD-203ENST00000429746 FRZBQ92765 325 aa11.6□□□□□ -0.55
CTSD-203ENST00000429746 CHCHD7Q9BUK0 85 aa11.6□□□□□ -0.55
CTSD-203ENST00000429746 SPATA12Q7Z6I5 190 aa11.59□□□□□ -0.55
CTSD-203ENST00000429746 MAPKAPK5-AS1Q8N8E1 139 aa11.59□□□□□ -0.55
CTSD-203ENST00000429746 RAB4AP20338 218 aa11.58□□□□□ -0.56
CTSD-203ENST00000429746 WFDC2Q14508 124 aa11.58□□□□□ -0.56
CTSD-203ENST00000429746 Q9HAA7 133 aa11.58□□□□□ -0.56
CTSD-203ENST00000429746 NAT8BQ9UHF3 227 aa11.58□□□□□ -0.56
CTSD-203ENST00000429746 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
CTSD-203ENST00000429746 FUSP35637 526 aaKnown RBP eCLIP11.57□□□□□ -0.56
CTSD-203ENST00000429746 RPS10P46783 165 aaKnown RBP11.57□□□□□ -0.56
CTSD-203ENST00000429746 ATRAIDQ6UW56 229 aa11.57□□□□□ -0.56
CTSD-203ENST00000429746 AMN1Q8IY45 258 aa11.57□□□□□ -0.56
CTSD-203ENST00000429746 DEFB104AQ8WTQ1 72 aa11.57□□□□□ -0.56
CTSD-203ENST00000429746 A0A1B0GXF2 115 aa11.56□□□□□ -0.56
CTSD-203ENST00000429746 TMEM97Q5BJF2 176 aa11.56□□□□□ -0.56
CTSD-203ENST00000429746 ENHOQ6UWT2 76 aa11.56□□□□□ -0.56
CTSD-203ENST00000429746 Q8N976 141 aa11.56□□□□□ -0.56
CTSD-203ENST00000429746 KLK12Q9UKR0 248 aa11.56□□□□□ -0.56
CTSD-203ENST00000429746 EREGO14944 169 aa11.55□□□□□ -0.56
CTSD-203ENST00000429746 PGPEP1Q9NXJ5 209 aa11.55□□□□□ -0.56
CTSD-203ENST00000429746 TRBV25-1A0A075B6N4 114 aa11.54□□□□□ -0.56
CTSD-203ENST00000429746 RBX1P62877 108 aa11.54□□□□□ -0.56
CTSD-203ENST00000429746 RIGQ13278 110 aa11.54□□□□□ -0.56
CTSD-203ENST00000429746 SMIM15Q7Z3B0 74 aa11.54□□□□□ -0.56
CTSD-203ENST00000429746 CHCHD5Q9BSY4 110 aa11.54□□□□□ -0.56
CTSD-203ENST00000429746 A0A087WX48 190 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 TRAV8-3A0A0A6YYJ7 113 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 IGHV1-24A0A0C4DH33 117 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 SDHAF1A6NFY7 115 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 PNRC1Q12796 327 aaPredicted RBP11.53□□□□□ -0.56
CTSD-203ENST00000429746 GAGE6Q13070 117 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 UQCC3Q6UW78 93 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 NRACQ8N912 160 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 BORCS7Q96B45 105 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 PRR34Q9NV39 138 aa11.53□□□□□ -0.56
CTSD-203ENST00000429746 TMEM218A2RU14 115 aa11.52□□□□□ -0.57
CTSD-203ENST00000429746 SMKR1H3BMG3 65 aa11.52□□□□□ -0.57
CTSD-203ENST00000429746 POLR2KP53803 58 aaKnown RBP11.52□□□□□ -0.57
CTSD-203ENST00000429746 FAM104BQ5XKR9 115 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms