RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 H3BVH4 76 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 H7C1H1 209 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 NDUFA4O00483 81 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 BRI3O95415 125 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 LYNX1P0DP58 116 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 S100A4P26447 101 aaKnown RBP3.66□□□□□ -1.82
LINC00458-202ENST00000427299 ZNF80P51504 273 aaPredicted RBP3.66□□□□□ -1.82
LINC00458-202ENST00000427299 DLX1P56177 255 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 RPL32P62910 135 aaKnown RBP3.66□□□□□ -1.82
LINC00458-202ENST00000427299 ATP5G2Q06055 141 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 PRR30Q53SZ7 412 aaPredicted RBP3.66□□□□□ -1.82
LINC00458-202ENST00000427299 LINC00242Q5T6M2 205 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 NEGR1Q7Z3B1 354 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 LINC01560Q8TB33 94 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 LINC00477Q96M19 166 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 NHP2Q9NX24 153 aaKnown RBP3.66□□□□□ -1.82
LINC00458-202ENST00000427299 PHLDA3Q9Y5J5 127 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 PTPRZ1P23471 2315 aaPredicted RBP3.66□□□□□ -1.82
LINC00458-202ENST00000427299 MAP1BP46821 2468 aaKnown RBP3.66□□□□□ -1.82
LINC00458-202ENST00000427299 BOD1L1Q8NFC6 3051 aa3.66□□□□□ -1.82
LINC00458-202ENST00000427299 EP300Q09472 2414 aaPredicted RBP3.65□□□□□ -1.82
LINC00458-202ENST00000427299 PTPRQQ9UMZ3 2332 aa3.65□□□□□ -1.82
LINC00458-202ENST00000427299 ZZEF1O43149 2961 aa3.65□□□□□ -1.82
LINC00458-202ENST00000427299 CACNA1AO00555 2505 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 DMXL1Q9Y485 3027 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 IGLV2-18A0A075B6J9 118 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 IGLV4-3A0A075B6K6 122 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 TRAV41A0A0B4J266 112 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 NPFFO15130 113 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV3-23P01764 117 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 RPL13AP40429 203 aaKnown RBP3.65□□□□□ -1.83
LINC00458-202ENST00000427299 EFNA4P52798 201 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 FXYD2P54710 66 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 CLEC19AQ6UXS0 136 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 PCP2Q8IVA1 136 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 C5orf56Q8N8D9 126 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 ATP6V0E2Q8NHE4 81 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 RAB37Q96AX2 223 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 TOMM6Q96B49 74 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 USMG5Q96IX5 58 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 ODF3Q96PU9 254 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 HIST1H4GQ99525 98 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 GEMIN7Q9H840 131 aaKnown RBP3.65□□□□□ -1.83
LINC00458-202ENST00000427299 MRPL35Q9NZE8 188 aaKnown RBP3.65□□□□□ -1.83
LINC00458-202ENST00000427299 CYSLTR1Q9Y271 337 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 S4R3C0 116 aa3.65□□□□□ -1.83
LINC00458-202ENST00000427299 CENPVL3A0A0U1RRI6 287 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 MYMXA0A1B0GTQ4 84 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 A0A1B0GV72 72 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 E9PLD3 99 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 IGHG4P01861 327 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 TRGV3P03979 118 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 TCTAP57738 103 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 PRB3Q04118 309 aaPredicted RBP3.64□□□□□ -1.83
LINC00458-202ENST00000427299 ERCC8Q13216 396 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 APRG1Q8IVJ8 170 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 RNF182Q8N6D2 247 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 ITLN2Q8WWU7 325 aaPredicted RBP3.64□□□□□ -1.83
LINC00458-202ENST00000427299 SCGB3A1Q96QR1 104 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 TIMM17AQ99595 171 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 KIR2DL4Q99706 377 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 SPTBN2O15020 2390 aa3.64□□□□□ -1.83
LINC00458-202ENST00000427299 ABCA4P78363 2273 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 TRAV8-2A0A0B4J237 113 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 TRAV40A0A0B4J280 105 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 A0A1B0GWB2 263 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 CLPSL1A2RUU4 121 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 ZNF815PA8K554 130 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 NDUFS8O00217 210 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 RS1O15537 224 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 MGPP08493 103 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 HLA-DMBP28068 263 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 NDUFV3P56181 108 aaKnown RBP3.63□□□□□ -1.83
LINC00458-202ENST00000427299 RRN3P1Q2M238 152 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 C2orf66Q6UXQ4 117 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 SCGB1D4Q6XE38 83 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 FOXI2Q6ZQN5 318 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 LINC00612Q8N6U2 182 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 TMEM141Q96I45 108 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 OCR1Q9BZK8 76 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 AGPAT4-IT1Q9H0P7 198 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 DAZ1Q9NQZ3 744 aaKnown RBP3.63□□□□□ -1.83
LINC00458-202ENST00000427299 SPANXB1Q9NS25 103 aaPredicted RBP3.63□□□□□ -1.83
LINC00458-202ENST00000427299 HHLA3Q9XRX5 114 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 ADGRG4Q8IZF6 3080 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 ZNF292O60281 2723 aa3.63□□□□□ -1.83
LINC00458-202ENST00000427299 CACNA1BQ00975 2339 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 TRBV7-3A0A075B6L6 115 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 TRBV20-1A0A075B6N2 111 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 IGKV2D-26A0A0A0MRZ7 120 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 TRAV25A0A0B4J276 109 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 TEX48A0A1B0GUV7 120 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 IGHV1-69P01742 117 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 FXYD7P58549 80 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 RHOHQ15669 191 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 Q8N377 158 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 MTURNQ8N3F0 131 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 POM121L12Q8N7R1 296 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 BAALCQ8WXS3 180 aa3.62□□□□□ -1.83
LINC00458-202ENST00000427299 MRPL16Q9NX20 251 aaKnown RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms