RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 SCRT2Q9NQ03 307 aa10.45□□□□□ -0.74
RPL28-202ENST00000426763 UBE2BP63146 152 aa10.44□□□□□ -0.74
RPL28-202ENST00000426763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.44□□□□□ -0.74
RPL28-202ENST00000426763 PRRC2AP48634 2157 aaKnown RBP10.44□□□□□ -0.74
RPL28-202ENST00000426763 TMEM126AQ9H061 195 aa10.44□□□□□ -0.74
RPL28-202ENST00000426763 A0A0J9YXV3 536 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 NDUFA7O95182 113 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 Q6ZS46 218 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 BBC3Q96PG8 261 aaPredicted RBP10.43□□□□□ -0.74
RPL28-202ENST00000426763 Q6ZTI0 123 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 C9JAW5 83 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 FAM222AQ5U5X8 452 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 SMR3AQ99954 134 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 TP53TG3Q9ULZ0 132 aa10.43□□□□□ -0.74
RPL28-202ENST00000426763 SIVA1O15304 175 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 RPL39P62891 51 aaKnown RBP10.42□□□□□ -0.74
RPL28-202ENST00000426763 MTURNQ8N3F0 131 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 EML5Q05BV3 1969 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 GOLGB1Q14789 3259 aaKnown RBP10.42□□□□□ -0.74
RPL28-202ENST00000426763 PRSS47A8MTI9 375 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 RPL18AQ02543 176 aaKnown RBP10.42□□□□□ -0.74
RPL28-202ENST00000426763 COA6Q5JTJ3 125 aaKnown RBP10.42□□□□□ -0.74
RPL28-202ENST00000426763 TIMM17AQ99595 171 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 BOD1L2Q8IYS8 172 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 TOMM6Q96B49 74 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 PRO1854Q9UHT4 67 aa10.42□□□□□ -0.74
RPL28-202ENST00000426763 LINC00482Q8N8I6 264 aa10.41□□□□□ -0.74
RPL28-202ENST00000426763 CEND1Q8N111 149 aa10.41□□□□□ -0.74
RPL28-202ENST00000426763 TRBV20-1A0A075B6N2 111 aa10.41□□□□□ -0.74
RPL28-202ENST00000426763 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
RPL28-202ENST00000426763 WNK1Q9H4A3 2382 aa10.41□□□□□ -0.74
RPL28-202ENST00000426763 MIFP14174 115 aa10.4□□□□□ -0.74
RPL28-202ENST00000426763 TNCP24821 2201 aa10.4□□□□□ -0.74
RPL28-202ENST00000426763 HIST2H2BDQ6DRA6 164 aa10.4□□□□□ -0.74
RPL28-202ENST00000426763 IGLV2-8P01709 118 aa10.4□□□□□ -0.74
RPL28-202ENST00000426763 C18orf65Q6ZTR6 163 aa10.4□□□□□ -0.74
RPL28-202ENST00000426763 COX7B2Q8TF08 81 aa10.4□□□□□ -0.74
RPL28-202ENST00000426763 TRAV26-1A0A087WT03 109 aa10.4□□□□□ -0.75
RPL28-202ENST00000426763 ZNF124Q15973 351 aa10.4□□□□□ -0.75
RPL28-202ENST00000426763 CEP295Q9C0D2 2601 aa10.4□□□□□ -0.75
RPL28-202ENST00000426763 TRAV12-1A0A0B4J245 112 aa10.39□□□□□ -0.75
RPL28-202ENST00000426763 MLST8Q9BVC4 326 aa10.39□□□□□ -0.75
RPL28-202ENST00000426763 LINC00322Q6ZN03 302 aaPredicted RBP10.39□□□□□ -0.75
RPL28-202ENST00000426763 NDUFA1O15239 70 aa10.39□□□□□ -0.75
RPL28-202ENST00000426763 IGLC6P0CF74 106 aa10.39□□□□□ -0.75
RPL28-202ENST00000426763 C20orf203Q8NBC4 194 aa10.38□□□□□ -0.75
RPL28-202ENST00000426763 WDR87Q6ZQQ6 2873 aa10.38□□□□□ -0.75
RPL28-202ENST00000426763 BAALCQ8WXS3 180 aa10.38□□□□□ -0.75
RPL28-202ENST00000426763 DEFB131BA0A096LNP1 70 aa10.37□□□□□ -0.75
RPL28-202ENST00000426763 LINC01545Q5VT33 79 aa10.37□□□□□ -0.75
RPL28-202ENST00000426763 ZFAND2AQ8N6M9 145 aa10.37□□□□□ -0.75
RPL28-202ENST00000426763 COX11Q9Y6N1 276 aa10.37□□□□□ -0.75
RPL28-202ENST00000426763 ANKRD11Q6UB99 2663 aaPredicted RBP10.37□□□□□ -0.75
RPL28-202ENST00000426763 GAGE2EQ4V326 116 aa10.37□□□□□ -0.75
RPL28-202ENST00000426763 GDF5OSQ5U4N7 250 aa10.37□□□□□ -0.75
RPL28-202ENST00000426763 GAGE2DQ9UEU5 116 aa10.37□□□□□ -0.75
RPL28-202ENST00000426763 IFITM1P13164 125 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 CXCL5P42830 114 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 BVES-AS1Q5T3Y7 98 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 LINC00173Q6ZV60 143 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 SOCS3O14543 225 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 TIRAPP58753 221 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 MAJINQ3KP22 176 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 GAGE2AQ6NT46 116 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 C9orf118A6NHY6 69 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 INAFM2P0DMQ5 153 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 FAM110AQ9BQ89 295 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 A0A1B0GXF2 115 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 UBE2V1Q13404 147 aa10.36□□□□□ -0.75
RPL28-202ENST00000426763 DLEU1O43261 78 aa10.35□□□□□ -0.75
RPL28-202ENST00000426763 PCP2Q8IVA1 136 aa10.35□□□□□ -0.75
RPL28-202ENST00000426763 ADAMTS20P59510 1910 aa10.35□□□□□ -0.75
RPL28-202ENST00000426763 NUPR1O60356 82 aa10.35□□□□□ -0.75
RPL28-202ENST00000426763 SPAG11BQ08648 103 aa10.35□□□□□ -0.75
RPL28-202ENST00000426763 CCL25O15444 150 aa10.35□□□□□ -0.75
RPL28-202ENST00000426763 NACAE9PAV3 2078 aa10.34□□□□□ -0.75
RPL28-202ENST00000426763 FRMD6-AS1P0C7T7 363 aa10.34□□□□□ -0.75
RPL28-202ENST00000426763 P0DMU3 169 aa10.34□□□□□ -0.75
RPL28-202ENST00000426763 FAM231AP0DMU4 169 aa10.34□□□□□ -0.75
RPL28-202ENST00000426763 FAM231CP0DMU5 169 aa10.34□□□□□ -0.75
RPL28-202ENST00000426763 CRIP2P52943 208 aaPredicted RBP10.34□□□□□ -0.75
RPL28-202ENST00000426763 GTSF1LQ9H1H1 148 aa10.34□□□□□ -0.75
RPL28-202ENST00000426763 HIST1H4AP62805 103 aaKnown RBP10.33□□□□□ -0.76
RPL28-202ENST00000426763 ABCA2Q9BZC7 2435 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 ETDCA0A1B0GVM5 59 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 KIR2DL5BA0A0G2JN68 375 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 KIR2DL5BA0A0G2JPC4 375 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 KIR2DL5AQ8N109 375 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 KIR2DL5BQ8NHK3 375 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 ARHGAP32A7KAX9 2087 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 Q6ZVH6 145 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 ATG2AQ2TAZ0 1938 aa10.33□□□□□ -0.76
RPL28-202ENST00000426763 MYO18BQ8IUG5 2567 aa10.32□□□□□ -0.76
RPL28-202ENST00000426763 SND1-IT1Q9HBX3 110 aa10.32□□□□□ -0.76
RPL28-202ENST00000426763 C11orf86A6NJI1 115 aa10.32□□□□□ -0.76
RPL28-202ENST00000426763 EXPH5Q8NEV8 1989 aa10.32□□□□□ -0.76
RPL28-202ENST00000426763 GAGE2BQ13066 116 aa10.31□□□□□ -0.76
RPL28-202ENST00000426763 C12orf74Q32Q52 190 aa10.31□□□□□ -0.76
RPL28-202ENST00000426763 SIGMAR1Q99720 223 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms