RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 DPH3P1Q9H4G8 78 aa12.2□□□□□ -0.46
HERC3-205ENST00000426683 RPL23P62829 140 aaKnown RBP12.19□□□□□ -0.46
HERC3-205ENST00000426683 Q6ZRN7 208 aaPredicted RBP12.19□□□□□ -0.46
HERC3-205ENST00000426683 ISOC2Q96AB3 205 aa12.19□□□□□ -0.46
HERC3-205ENST00000426683 PGLYRP4Q96LB8 373 aa12.19□□□□□ -0.46
HERC3-205ENST00000426683 NAT8Q9UHE5 227 aa12.19□□□□□ -0.46
HERC3-205ENST00000426683 M0QY20 66 aa12.18□□□□□ -0.46
HERC3-205ENST00000426683 ADIRFQ15847 76 aa12.18□□□□□ -0.46
HERC3-205ENST00000426683 NFE4Q86UQ8 179 aa12.18□□□□□ -0.46
HERC3-205ENST00000426683 C15orf54Q8N8G6 183 aa12.18□□□□□ -0.46
HERC3-205ENST00000426683 H7C1H1 209 aa12.17□□□□□ -0.46
HERC3-205ENST00000426683 FOXA3P55318 350 aaPredicted RBP12.17□□□□□ -0.46
HERC3-205ENST00000426683 Q8N3U1 123 aa12.17□□□□□ -0.46
HERC3-205ENST00000426683 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.17□□□□□ -0.46
HERC3-205ENST00000426683 TSKUQ8WUA8 353 aa12.17□□□□□ -0.46
HERC3-205ENST00000426683 PKD1P98161 4303 aa12.16□□□□□ -0.46
HERC3-205ENST00000426683 BORCS7Q96B45 105 aa12.16□□□□□ -0.46
HERC3-205ENST00000426683 DNAJC30Q96LL9 226 aa12.16□□□□□ -0.46
HERC3-205ENST00000426683 GFRA4Q9GZZ7 299 aa12.16□□□□□ -0.46
HERC3-205ENST00000426683 V9GYV3 84 aa12.16□□□□□ -0.46
HERC3-205ENST00000426683 DYNC1H1Q14204 4646 aaKnown RBP12.15□□□□□ -0.46
HERC3-205ENST00000426683 HIGD1CA8MV81 97 aa12.15□□□□□ -0.46
HERC3-205ENST00000426683 IBA57-AS1B1ANH7 110 aa12.15□□□□□ -0.46
HERC3-205ENST00000426683 SMIM15Q7Z3B0 74 aa12.15□□□□□ -0.46
HERC3-205ENST00000426683 DNAH11Q96DT5 4516 aa12.14□□□□□ -0.47
HERC3-205ENST00000426683 TRBV6-8A0A0A6YYG3 113 aa12.14□□□□□ -0.47
HERC3-205ENST00000426683 FAM231BA6NCW3 169 aa12.14□□□□□ -0.47
HERC3-205ENST00000426683 RASL11AQ6T310 242 aa12.14□□□□□ -0.47
HERC3-205ENST00000426683 DAZ4Q86SG3 579 aaKnown RBP12.14□□□□□ -0.47
HERC3-205ENST00000426683 DAZ3Q9NR90 486 aaKnown RBP12.14□□□□□ -0.47
HERC3-205ENST00000426683 CLLU1Q5K131 121 aa12.13□□□□□ -0.47
HERC3-205ENST00000426683 NIT1Q86X76 327 aa12.13□□□□□ -0.47
HERC3-205ENST00000426683 URGCP-MRPS24S4R325 110 aa12.13□□□□□ -0.47
HERC3-205ENST00000426683 A0A1B0GUT8 65 aa12.12□□□□□ -0.47
HERC3-205ENST00000426683 IFITM2Q01629 132 aa12.12□□□□□ -0.47
HERC3-205ENST00000426683 Q9HAA7 133 aa12.12□□□□□ -0.47
HERC3-205ENST00000426683 NIT2Q9NQR4 276 aa12.12□□□□□ -0.47
HERC3-205ENST00000426683 TRAV26-2A0A0B4J265 109 aa12.11□□□□□ -0.47
HERC3-205ENST00000426683 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
HERC3-205ENST00000426683 NTM-AS1Q6ZSK4 140 aa12.11□□□□□ -0.47
HERC3-205ENST00000426683 PKHD1P08F94 4074 aa12.1□□□□□ -0.47
HERC3-205ENST00000426683 A0A087WX48 190 aa12.1□□□□□ -0.47
HERC3-205ENST00000426683 TMEM262E9PQX1 116 aa12.1□□□□□ -0.47
HERC3-205ENST00000426683 LAGE3Q14657 143 aa12.1□□□□□ -0.47
HERC3-205ENST00000426683 KCNIP4Q6PIL6 250 aa12.1□□□□□ -0.47
HERC3-205ENST00000426683 GATD1Q8NB37 220 aa12.1□□□□□ -0.47
HERC3-205ENST00000426683 NUP35Q8NFH5 326 aa12.1□□□□□ -0.47
HERC3-205ENST00000426683 SPATA12Q7Z6I5 190 aa12.09□□□□□ -0.47
HERC3-205ENST00000426683 CHCHD5Q9BSY4 110 aa12.09□□□□□ -0.47
HERC3-205ENST00000426683 CHCHD7Q9BUK0 85 aa12.09□□□□□ -0.47
HERC3-205ENST00000426683 NAT8BQ9UHF3 227 aa12.09□□□□□ -0.47
HERC3-205ENST00000426683 PSCAO43653 123 aa12.08□□□□□ -0.48
HERC3-205ENST00000426683 RIGQ13278 110 aa12.08□□□□□ -0.48
HERC3-205ENST00000426683 FRZBQ92765 325 aa12.08□□□□□ -0.48
HERC3-205ENST00000426683 TRBV25-1A0A075B6N4 114 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 A0A087WTM6 91 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 TRAV8-3A0A0A6YYJ7 113 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 SMIM27A0A1W2PRY6 76 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 C16orf90A8MZG2 172 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 EREGO14944 169 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 KLK12Q9UKR0 248 aa12.07□□□□□ -0.48
HERC3-205ENST00000426683 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
HERC3-205ENST00000426683 KRTAP10-2P60368 255 aa12.06□□□□□ -0.48
HERC3-205ENST00000426683 ELOBQ15370 118 aa12.06□□□□□ -0.48
HERC3-205ENST00000426683 RPL39LQ96EH5 51 aaKnown RBP12.06□□□□□ -0.48
HERC3-205ENST00000426683 PKIAP61925 76 aa12.05□□□□□ -0.48
HERC3-205ENST00000426683 IQCJQ1A5X6 159 aa12.05□□□□□ -0.48
HERC3-205ENST00000426683 MPV17L2Q567V2 206 aa12.05□□□□□ -0.48
HERC3-205ENST00000426683 DEFB104AQ8WTQ1 72 aa12.05□□□□□ -0.48
HERC3-205ENST00000426683 TM2D2Q9BX73 214 aa12.05□□□□□ -0.48
HERC3-205ENST00000426683 GAGE6Q13070 117 aa12.04□□□□□ -0.48
HERC3-205ENST00000426683 UBE2WQ96B02 151 aa12.04□□□□□ -0.48
HERC3-205ENST00000426683 RNF185Q96GF1 192 aa12.04□□□□□ -0.48
HERC3-205ENST00000426683 RAB4AP20338 218 aa12.03□□□□□ -0.48
HERC3-205ENST00000426683 PNRC1Q12796 327 aaPredicted RBP12.03□□□□□ -0.48
HERC3-205ENST00000426683 ATRAIDQ6UW56 229 aa12.03□□□□□ -0.48
HERC3-205ENST00000426683 AMN1Q8IY45 258 aa12.03□□□□□ -0.48
HERC3-205ENST00000426683 GAS8-AS1O95177 125 aa12.02□□□□□ -0.49
HERC3-205ENST00000426683 COTL1Q14019 142 aa12.02□□□□□ -0.49
HERC3-205ENST00000426683 Q8N976 141 aa12.02□□□□□ -0.49
HERC3-205ENST00000426683 TMEM243Q9BU79 118 aa12.02□□□□□ -0.49
HERC3-205ENST00000426683 KIAA1109Q2LD37 5005 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 LRCOL1A6NCL2 159 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 ANGP03950 147 aaKnown RBP12.01□□□□□ -0.49
HERC3-205ENST00000426683 CAMPP49913 170 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 RBX1P62877 108 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 UQCC3Q6UW78 93 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 RMI2Q96E14 147 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 MRAP2Q96G30 205 aa12.01□□□□□ -0.49
HERC3-205ENST00000426683 IGKV2D-24A0A075B6R9 120 aa12□□□□□ -0.49
HERC3-205ENST00000426683 SDHAF1A6NFY7 115 aa12□□□□□ -0.49
HERC3-205ENST00000426683 CRPP02741 224 aa12□□□□□ -0.49
HERC3-205ENST00000426683 FUSP35637 526 aaKnown RBP eCLIP12□□□□□ -0.49
HERC3-205ENST00000426683 AMTP48728 403 aa12□□□□□ -0.49
HERC3-205ENST00000426683 PGPEP1Q9NXJ5 209 aa12□□□□□ -0.49
HERC3-205ENST00000426683 HERC2O95714 4834 aa12□□□□□ -0.49
HERC3-205ENST00000426683 DNAH5Q8TE73 4624 aa11.99□□□□□ -0.49
HERC3-205ENST00000426683 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms