RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 H3BT86 120 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 M0R135 149 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 CCL16O15467 120 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 IGHV3-33P01772 117 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 ACYP1P07311 99 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 ZNF22P17026 224 aaPredicted RBP1.91□□□□□ -2.1
LINC01040-201ENST00000425048 LOXP28300 417 aaPredicted RBP1.91□□□□□ -2.1
LINC01040-201ENST00000425048 FCER1GP30273 86 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 LEPP41159 167 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 FXYD7P58549 80 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 FGF12P61328 243 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 CCL8P80075 99 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 ERCC8Q13216 396 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 NSUN5P1Q3KNT7 163 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 PIGYQ3MUY2 71 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 VMA21Q3ZAQ7 101 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 FKBP1CQ5VVH2 108 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 SFTA2Q6UW10 78 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 Q6ZRU5 148 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 LINC00643Q86TS7 51 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 SERP2Q8N6R1 65 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 WDR31Q8NA23 367 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 BORCS8Q96FH0 119 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 FAM167A-AS1Q96KT0 104 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 PGLYRP4Q96LB8 373 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 METTL26Q96S19 204 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 NABP2Q9BQ15 211 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 RTL8AQ9BWD3 113 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 OTORQ9NRC9 128 aa1.91□□□□□ -2.1
LINC01040-201ENST00000425048 TRAV26-2A0A0B4J265 109 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 NCBP2LA6PVI3 153 aaKnown RBP1.9□□□□□ -2.11
LINC01040-201ENST00000425048 SS18L1O75177 396 aaPredicted RBP1.9□□□□□ -2.11
LINC01040-201ENST00000425048 NDUFC2O95298 119 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 ARMS2P0C7Q2 107 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 COX6B1P14854 86 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 NPC2P61916 151 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 UBE2L3P68036 154 aaKnown RBP1.9□□□□□ -2.11
LINC01040-201ENST00000425048 RPL18AQ02543 176 aaKnown RBP1.9□□□□□ -2.11
LINC01040-201ENST00000425048 HES3Q5TGS1 186 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 VN1R4Q7Z5H5 301 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 RNASE6Q93091 150 aaKnown RBP1.9□□□□□ -2.11
LINC01040-201ENST00000425048 FOXC2Q99958 501 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 MRPL35Q9NZE8 188 aaKnown RBP1.9□□□□□ -2.11
LINC01040-201ENST00000425048 AMMECR1Q9Y4X0 333 aaPredicted RBP1.9□□□□□ -2.11
LINC01040-201ENST00000425048 FREM1Q5H8C1 2179 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 RTTNQ86VV8 2226 aa1.9□□□□□ -2.11
LINC01040-201ENST00000425048 CACNA1DQ01668 2161 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 CXorf51AA0A1B0GTR3 108 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 LOC389332A0A1B0GUA5 103 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 A0A1B0GUT8 65 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 D6R8Y8 96 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 LYZL6O75951 148 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 P01737 135 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 IGHV3-30P01768 117 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 IGHG2P01859 326 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 CLPSP04118 112 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 IGHV3-30-5P0DP03 117 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 ATXN8Q156A1 80 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 MRPL51Q4U2R6 128 aaKnown RBP1.89□□□□□ -2.11
LINC01040-201ENST00000425048 FAM201AQ5SY85 155 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 FAM104BQ5XKR9 115 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 GUSBP11Q6P575 273 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 LYPD5Q6UWN5 251 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 C2orf82Q6UX34 121 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 PRR15Q8IV56 129 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 DCANP1Q8TF63 244 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 TMEM263Q8WUH6 116 aaKnown RBP1.89□□□□□ -2.11
LINC01040-201ENST00000425048 BRK1Q8WUW1 75 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 ZNF714Q96N38 554 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 PRO1854Q9UHT4 67 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 SLC25A15Q9Y619 301 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 POLEQ07864 2286 aa1.89□□□□□ -2.11
LINC01040-201ENST00000425048 FBN3Q75N90 2809 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 DSCAML1Q8TD84 2053 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 TRAV12-1A0A0B4J245 112 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 A0A0B4J2C4 111 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 A0A0J9YY99 117 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 TRBV30A0A0K0K1B3 111 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 TRBV6-1A0A0K0K1D8 114 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 A0A1W2PQD3 144 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 TMEM223A0PJW6 202 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 FAM223BA6NKX1 122 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 C17orf98A8MV24 154 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 IQCF6A8MYZ5 107 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 H7BZZ5 65 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 FSTL3O95633 263 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 TCRAP04437 139 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 DLX1P56177 255 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 SYNJ2BPP57105 145 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 SPINK9Q5DT21 86 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 Q6JHZ5 121 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 DAZ4Q86SG3 579 aaKnown RBP1.88□□□□□ -2.11
LINC01040-201ENST00000425048 FAM223AQ8IWN6 122 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 ORMDL3Q8N138 153 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 SLC25A29Q8N8R3 303 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 FXYD5Q96DB9 178 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 DAZ1Q9NQZ3 744 aaKnown RBP1.88□□□□□ -2.11
LINC01040-201ENST00000425048 LINC00474Q9P2X8 69 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 GNG12Q9UBI6 72 aa1.88□□□□□ -2.11
LINC01040-201ENST00000425048 IGKV1OR2-108A0A075B7D4 117 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms