RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 LINC01006Q8NI28 216 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 DUX3Q96PT4 197 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 FAM110AQ9BQ89 295 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 ANAPC13Q9BS18 74 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 TTTY13Q9BZ97 58 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 PHLDA3Q9Y5J5 127 aa12.31□□□□□ -0.44
CMTM3-202ENST00000424011 TRAV26-2A0A0B4J265 109 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 K7EMI3 77 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 RRN3P1Q2M238 152 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 ZMAT4Q9H898 229 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 HHLA3Q9XRX5 114 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 LINC01546A6NGU7 62 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 FHL3Q13643 280 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 TAL2Q16559 108 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 RAX2Q96IS3 184 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 HIVEP1P15822 2718 aa12.29□□□□□ -0.44
CMTM3-202ENST00000424011 INAFM1C9JVW0 142 aa12.28□□□□□ -0.44
CMTM3-202ENST00000424011 CCL24O00175 119 aa12.28□□□□□ -0.44
CMTM3-202ENST00000424011 CD28P10747 220 aa12.28□□□□□ -0.44
CMTM3-202ENST00000424011 HLA-DRB4P13762 266 aa12.28□□□□□ -0.44
CMTM3-202ENST00000424011 HLA-DRB4X5D2U9 266 aa12.28□□□□□ -0.44
CMTM3-202ENST00000424011 GNRH2O43555 120 aa12.28□□□□□ -0.44
CMTM3-202ENST00000424011 NRACQ8N912 160 aa12.28□□□□□ -0.44
CMTM3-202ENST00000424011 TRAV12-3A0A0B4J271 114 aa12.27□□□□□ -0.44
CMTM3-202ENST00000424011 M0R381 172 aa12.27□□□□□ -0.44
CMTM3-202ENST00000424011 NDUFA7O95182 113 aa12.27□□□□□ -0.44
CMTM3-202ENST00000424011 HERV-K104P63124 156 aa12.27□□□□□ -0.44
CMTM3-202ENST00000424011 DEFB114Q30KQ6 69 aa12.27□□□□□ -0.44
CMTM3-202ENST00000424011 TMEM61Q8N0U2 210 aa12.27□□□□□ -0.44
CMTM3-202ENST00000424011 NXT2Q9NPJ8 142 aaKnown RBP12.27□□□□□ -0.44
CMTM3-202ENST00000424011 NF1P21359 2839 aa12.27□□□□□ -0.45
CMTM3-202ENST00000424011 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
CMTM3-202ENST00000424011 IGKV3-20P01619 116 aa12.27□□□□□ -0.45
CMTM3-202ENST00000424011 CFAP126Q5VTH2 177 aa12.27□□□□□ -0.45
CMTM3-202ENST00000424011 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
CMTM3-202ENST00000424011 B5MCH6 92 aa12.26□□□□□ -0.45
CMTM3-202ENST00000424011 RNASE3P12724 160 aaKnown RBP12.26□□□□□ -0.45
CMTM3-202ENST00000424011 ODF1Q14990 250 aa12.26□□□□□ -0.45
CMTM3-202ENST00000424011 NFE4Q86UQ8 179 aa12.26□□□□□ -0.45
CMTM3-202ENST00000424011 C11orf44Q8N8P7 122 aa12.26□□□□□ -0.45
CMTM3-202ENST00000424011 CITED2Q99967 270 aaPredicted RBP12.26□□□□□ -0.45
CMTM3-202ENST00000424011 A0A1W2PRX2 142 aa12.26□□□□□ -0.45
CMTM3-202ENST00000424011 DEFB131AP59861 70 aa12.26□□□□□ -0.45
CMTM3-202ENST00000424011 Q8N8P6 123 aa12.25□□□□□ -0.45
CMTM3-202ENST00000424011 DPH3P1Q9H4G8 78 aa12.25□□□□□ -0.45
CMTM3-202ENST00000424011 IGKCP01834 107 aa12.25□□□□□ -0.45
CMTM3-202ENST00000424011 CD7P09564 240 aa12.25□□□□□ -0.45
CMTM3-202ENST00000424011 FCER1GP30273 86 aa12.25□□□□□ -0.45
CMTM3-202ENST00000424011 SMCPP49901 116 aaPredicted RBP12.25□□□□□ -0.45
CMTM3-202ENST00000424011 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
CMTM3-202ENST00000424011 NXPH4O95158 308 aa12.24□□□□□ -0.45
CMTM3-202ENST00000424011 ZFAND6Q6FIF0 208 aa12.23□□□□□ -0.45
CMTM3-202ENST00000424011 VCX2Q9H322 139 aa12.23□□□□□ -0.45
CMTM3-202ENST00000424011 TRAV12-2A0A075B6T6 113 aa12.23□□□□□ -0.45
CMTM3-202ENST00000424011 PRSS29PA6NIE9 313 aa12.23□□□□□ -0.45
CMTM3-202ENST00000424011 A8MTW9 85 aa12.23□□□□□ -0.45
CMTM3-202ENST00000424011 GTSCR1Q86UQ5 136 aa12.23□□□□□ -0.45
CMTM3-202ENST00000424011 C14orf178Q8N769 122 aaPredicted RBP12.23□□□□□ -0.45
CMTM3-202ENST00000424011 BAHCC1Q9P281 2608 aa12.23□□□□□ -0.45
CMTM3-202ENST00000424011 IGHV1OR15-1A0A075B7D0 117 aa12.22□□□□□ -0.45
CMTM3-202ENST00000424011 H3BMM0 161 aa12.22□□□□□ -0.45
CMTM3-202ENST00000424011 TMEM158Q8WZ71 300 aa12.22□□□□□ -0.45
CMTM3-202ENST00000424011 KNCNA6PVL3 124 aa12.22□□□□□ -0.45
CMTM3-202ENST00000424011 ZC2HC1BQ5TFG8 222 aa12.22□□□□□ -0.45
CMTM3-202ENST00000424011 HIST2H2BDQ6DRA6 164 aa12.22□□□□□ -0.45
CMTM3-202ENST00000424011 PPP1R17O96001 155 aa12.21□□□□□ -0.45
CMTM3-202ENST00000424011 PPDPFLQ8WWR9 84 aa12.21□□□□□ -0.45
CMTM3-202ENST00000424011 HIST1H4GQ99525 98 aa12.21□□□□□ -0.45
CMTM3-202ENST00000424011 MAP6D1Q9H9H5 199 aa12.21□□□□□ -0.45
CMTM3-202ENST00000424011 AGRNO00468 2067 aa12.21□□□□□ -0.46
CMTM3-202ENST00000424011 RPL32P62910 135 aaKnown RBP12.21□□□□□ -0.46
CMTM3-202ENST00000424011 NSD1Q96L73 2696 aaPredicted RBP12.21□□□□□ -0.46
CMTM3-202ENST00000424011 TRGV11A0A075B6L2 103 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 CRLF1O75462 422 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 DPM2O94777 84 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 NHLRC4P0CG21 123 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-202ENST00000424011 MAPKAPK5-AS1Q8N8E1 139 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 FN1P02751 2386 aaKnown RBP12.2□□□□□ -0.46
CMTM3-202ENST00000424011 PROK1P58294 105 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 MORN3Q6PF18 240 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-202ENST00000424011 RASL10AQ92737 203 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 C9orf85Q96MD7 179 aa12.2□□□□□ -0.46
CMTM3-202ENST00000424011 ZNF256Q9Y2P7 627 aaPredicted RBP12.2□□□□□ -0.46
CMTM3-202ENST00000424011 TRBV7-3A0A075B6L6 115 aa12.19□□□□□ -0.46
CMTM3-202ENST00000424011 PRSS1P07477 247 aa12.19□□□□□ -0.46
CMTM3-202ENST00000424011 LAGE3Q14657 143 aa12.19□□□□□ -0.46
CMTM3-202ENST00000424011 Q8N1Y9 231 aa12.19□□□□□ -0.46
CMTM3-202ENST00000424011 CARD19Q96LW7 228 aa12.19□□□□□ -0.46
CMTM3-202ENST00000424011 MGPP08493 103 aa12.19□□□□□ -0.46
CMTM3-202ENST00000424011 SMIM20Q8N5G0 67 aa12.19□□□□□ -0.46
CMTM3-202ENST00000424011 POM121L12Q8N7R1 296 aa12.18□□□□□ -0.46
CMTM3-202ENST00000424011 RPL39LQ96EH5 51 aaKnown RBP12.18□□□□□ -0.46
CMTM3-202ENST00000424011 CITED1Q99966 193 aa12.18□□□□□ -0.46
CMTM3-202ENST00000424011 SMIM2Q9BVW6 85 aa12.18□□□□□ -0.46
CMTM3-202ENST00000424011 ATP5LO75964 103 aa12.17□□□□□ -0.46
CMTM3-202ENST00000424011 CMC4P56277 68 aaPredicted RBP12.17□□□□□ -0.46
CMTM3-202ENST00000424011 TEN1Q86WV5 123 aa12.17□□□□□ -0.46
CMTM3-202ENST00000424011 MUC4Q99102 2169 aa12.17□□□□□ -0.46
CMTM3-202ENST00000424011 TNFRSF18Q9Y5U5 241 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms