RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 NABP2Q9BQ15 211 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 LOC107984640A0A0U1RRK4 108 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 A0A1B0GV90 55 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 PEX7O00628 323 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 RPS11P62280 158 aaKnown RBP eCLIP2.69□□□□□ -1.98
TOP2A-201ENST00000423485 GAGE2EQ4V326 116 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 Q8N7P7 452 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 CARD19Q96LW7 228 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BLQ99880 126 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 GAGE2DQ9UEU5 116 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 LHFPL6Q9Y693 200 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 TCL1BO95988 128 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 PPYP01298 95 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 LINC01545Q5VT33 79 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 DAND5Q8N907 189 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 ZNRF2Q8NHG8 242 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 TM2D1Q9BX74 207 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 LAMTOR3Q9UHA4 124 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 TRAV2A0A0B4J234 112 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 TRAV24A0A0B4J272 114 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 A0A1B0GW15 77 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 SCGB1C2P0DMR2 95 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 RTBDNQ9BSG5 229 aaPredicted RBP2.69□□□□□ -1.98
TOP2A-201ENST00000423485 SNHG12Q9BXW3 62 aa2.69□□□□□ -1.98
TOP2A-201ENST00000423485 FABP5P3A8MUU1 101 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 CXCL3P19876 107 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 FOXG1P55316 489 aaPredicted RBP2.68□□□□□ -1.98
TOP2A-201ENST00000423485 C2orf83Q53S99 150 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 LINC00305Q7Z4B0 112 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 PCP2Q8IVA1 136 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 VCYO14598 125 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 ARPC5O15511 151 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BKO60814 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BJP06899 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BOP23527 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BBP33778 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BDP58876 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BCP62807 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST2H2BEQ16778 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.68□□□□□ -1.98
TOP2A-201ENST00000423485 SEM1Q6ZVN7 128 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 LHFPL1Q86WI0 220 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BHQ93079 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BNQ99877 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HIST1H2BMQ99879 126 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 SHANK2-AS3Q9BTD1 123 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 IGHV3-16A0A0C4DH30 117 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 PDE6DO43924 150 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF138P52744 262 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 C1orf137Q5JT78 98 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF705AQ6ZN79 300 aaPredicted RBP2.68□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM61Q8N0U2 210 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 MAP6D1Q9H9H5 199 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 CTSZQ9UBR2 303 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 IGKV1-5P01602 117 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 HBBP68871 147 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF876PQ49A33 203 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM75Q8N9X5 138 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 DERL1Q9BUN8 251 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 PRAC2D3DTV9 90 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 SRP19P09132 144 aaKnown RBP2.68□□□□□ -1.98
TOP2A-201ENST00000423485 FGF6P10767 208 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 BATFQ16520 125 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 CLPSL2Q6UWE3 100 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 SCGB1D4Q6XE38 83 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 RPP25LQ8N5L8 163 aaKnown RBP2.68□□□□□ -1.98
TOP2A-201ENST00000423485 COQ2Q96H96 371 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 C20orf173Q96LM9 149 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM70Q9BUB7 260 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 KLK9Q9UKQ9 250 aa2.68□□□□□ -1.98
TOP2A-201ENST00000423485 IGKV1-6A0A0C4DH72 117 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 A0A0G2JRQ6 117 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 C15orf65H3BRN8 121 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 ZNF25P17030 456 aaPredicted RBP2.67□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM50BP56557 158 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 PAX2Q02962 417 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 LINC01620Q4KN68 170 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 Q6P435 159 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 ATP5L2Q7Z4Y8 100 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 GATD1Q8NB37 220 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 OR10C1Q96KK4 312 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 TMEM222Q9H0R3 208 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 RPS10P5Q9NQ39 176 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 IGKV3D-20A0A0C4DH25 116 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 SMIM30A4D0T7 59 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 K7EQD1 137 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 RTL8CO15255 209 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 KIAA0087Q14695 138 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 SPRNQ5BIV9 151 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 PIK3CD-AS1Q5SR53 167 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 GNB1LQ9BYB4 327 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 LRP1Q07954 4544 aaKnown RBP2.67□□□□□ -1.98
TOP2A-201ENST00000423485 IGKV1D-17A0A075B6S4 117 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 COX7A2LO14548 114 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 NCR2O95944 276 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 CXorf1O96002 111 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 RPS28P62857 69 aaKnown RBP2.67□□□□□ -1.98
TOP2A-201ENST00000423485 ATRAIDQ6UW56 229 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 ALKAL2Q6UX46 152 aa2.67□□□□□ -1.98
TOP2A-201ENST00000423485 C9orf47Q6ZRZ4 202 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms