RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 GAGE1Q13065 139 aa10.93□□□□□ -0.66
DDX55-203ENST00000421670 GAGE4Q13068 117 aa10.93□□□□□ -0.66
DDX55-203ENST00000421670 GAGE5Q13069 117 aa10.93□□□□□ -0.66
DDX55-203ENST00000421670 GAGE13Q4V321 117 aa10.93□□□□□ -0.66
DDX55-203ENST00000421670 NEXN-AS1Q8NBZ9 246 aa10.93□□□□□ -0.66
DDX55-203ENST00000421670 RPL39LQ96EH5 51 aaKnown RBP10.93□□□□□ -0.66
DDX55-203ENST00000421670 C15orf53Q8NAA6 179 aa10.92□□□□□ -0.66
DDX55-203ENST00000421670 APLNQ9ULZ1 77 aa10.92□□□□□ -0.66
DDX55-203ENST00000421670 TRBV10-1A0A0K0K1A3 114 aa10.91□□□□□ -0.66
DDX55-203ENST00000421670 SRIP30626 198 aa10.91□□□□□ -0.66
DDX55-203ENST00000421670 RPS10P46783 165 aaKnown RBP10.91□□□□□ -0.66
DDX55-203ENST00000421670 ZNRF2Q8NHG8 242 aa10.91□□□□□ -0.66
DDX55-203ENST00000421670 MRAP2Q96G30 205 aa10.91□□□□□ -0.66
DDX55-203ENST00000421670 LINC00694P0DN24 101 aa10.9□□□□□ -0.66
DDX55-203ENST00000421670 MRPL23Q16540 153 aaKnown RBP10.9□□□□□ -0.66
DDX55-203ENST00000421670 GNB1LQ9BYB4 327 aa10.9□□□□□ -0.66
DDX55-203ENST00000421670 DNAH1Q9P2D7 4330 aa10.9□□□□□ -0.66
DDX55-203ENST00000421670 TRBV7-3A0A075B6L6 115 aa10.9□□□□□ -0.67
DDX55-203ENST00000421670 D6R8Y8 96 aa10.9□□□□□ -0.67
DDX55-203ENST00000421670 HLA-DQA1P01909 254 aa10.9□□□□□ -0.67
DDX55-203ENST00000421670 CKS2P33552 79 aa10.9□□□□□ -0.67
DDX55-203ENST00000421670 RPL36AP83881 106 aaKnown RBP10.9□□□□□ -0.67
DDX55-203ENST00000421670 RPL36ALQ969Q0 106 aaKnown RBP10.9□□□□□ -0.67
DDX55-203ENST00000421670 NIT2Q9NQR4 276 aa10.9□□□□□ -0.67
DDX55-203ENST00000421670 COX19Q49B96 90 aa10.89□□□□□ -0.67
DDX55-203ENST00000421670 OR10J3Q5JRS4 329 aa10.89□□□□□ -0.67
DDX55-203ENST00000421670 FRZBQ92765 325 aa10.89□□□□□ -0.67
DDX55-203ENST00000421670 APCSP02743 223 aa10.88□□□□□ -0.67
DDX55-203ENST00000421670 MT-ND6P03923 174 aa10.88□□□□□ -0.67
DDX55-203ENST00000421670 UBE2D3P61077 147 aa10.88□□□□□ -0.67
DDX55-203ENST00000421670 UBE2D2P62837 147 aa10.88□□□□□ -0.67
DDX55-203ENST00000421670 KIAA1644Q3SXP7 199 aa10.88□□□□□ -0.67
DDX55-203ENST00000421670 NRACQ8N912 160 aa10.88□□□□□ -0.67
DDX55-203ENST00000421670 MRPL18Q9H0U6 180 aaKnown RBP10.88□□□□□ -0.67
DDX55-203ENST00000421670 TNFRSF18Q9Y5U5 241 aa10.88□□□□□ -0.67
DDX55-203ENST00000421670 IGHV3-38A0A0C4DH36 116 aa10.87□□□□□ -0.67
DDX55-203ENST00000421670 TCTAP57738 103 aa10.87□□□□□ -0.67
DDX55-203ENST00000421670 NEGR1Q7Z3B1 354 aa10.87□□□□□ -0.67
DDX55-203ENST00000421670 ORMDL3Q8N138 153 aa10.87□□□□□ -0.67
DDX55-203ENST00000421670 VPS13DQ5THJ4 4388 aa10.87□□□□□ -0.67
DDX55-203ENST00000421670 COLCA2A8K830 154 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 ATP6V0E2Q8NHE4 81 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 DNAJC30Q96LL9 226 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 TRAPPC1Q9Y5R8 145 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 ALMS1Q8TCU4 4167 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 NPYP01303 97 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 FABP9Q0Z7S8 132 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 DEFB104AQ8WTQ1 72 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 PRELID3AQ96N28 172 aa10.86□□□□□ -0.67
DDX55-203ENST00000421670 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
DDX55-203ENST00000421670 TNFRSF6BO95407 300 aa10.85□□□□□ -0.67
DDX55-203ENST00000421670 PPBPP02775 128 aa10.85□□□□□ -0.67
DDX55-203ENST00000421670 ESRGQ1W209 222 aa10.85□□□□□ -0.67
DDX55-203ENST00000421670 TRBV6-5A0A0K0K1A5 114 aa10.84□□□□□ -0.67
DDX55-203ENST00000421670 SH2D6Q7Z4S9 175 aa10.84□□□□□ -0.67
DDX55-203ENST00000421670 ST20Q9HBF5 79 aa10.84□□□□□ -0.67
DDX55-203ENST00000421670 RAB5AP20339 215 aa10.83□□□□□ -0.68
DDX55-203ENST00000421670 LYPD5Q6UWN5 251 aa10.83□□□□□ -0.68
DDX55-203ENST00000421670 TMEM70Q9BUB7 260 aa10.83□□□□□ -0.68
DDX55-203ENST00000421670 GTSF1LQ9H1H1 148 aa10.83□□□□□ -0.68
DDX55-203ENST00000421670 PPP1R17O96001 155 aa10.82□□□□□ -0.68
DDX55-203ENST00000421670 SUMO2P61956 95 aaKnown RBP10.82□□□□□ -0.68
DDX55-203ENST00000421670 DAZ4Q86SG3 579 aaKnown RBP10.82□□□□□ -0.68
DDX55-203ENST00000421670 DAZ3Q9NR90 486 aaKnown RBP10.82□□□□□ -0.68
DDX55-203ENST00000421670 LINC00588Q9Y4M8 146 aa10.82□□□□□ -0.68
DDX55-203ENST00000421670 POLR2KP53803 58 aaKnown RBP10.81□□□□□ -0.68
DDX55-203ENST00000421670 CCL18P55774 89 aa10.81□□□□□ -0.68
DDX55-203ENST00000421670 UBE2DNLQ8IWF7 75 aa10.81□□□□□ -0.68
DDX55-203ENST00000421670 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.81□□□□□ -0.68
DDX55-203ENST00000421670 ALKBH7Q9BT30 221 aaPredicted RBP10.81□□□□□ -0.68
DDX55-203ENST00000421670 LOC389332A0A1B0GUA5 103 aa10.8□□□□□ -0.68
DDX55-203ENST00000421670 PHOX2AO14813 284 aa10.8□□□□□ -0.68
DDX55-203ENST00000421670 C20orf78Q9BR46 151 aa10.8□□□□□ -0.68
DDX55-203ENST00000421670 LAMTOR2Q9Y2Q5 125 aa10.8□□□□□ -0.68
DDX55-203ENST00000421670 KMT2AQ03164 3969 aa10.79□□□□□ -0.68
DDX55-203ENST00000421670 TRGC2P03986 189 aa10.79□□□□□ -0.68
DDX55-203ENST00000421670 NTM-AS1Q6ZSK4 140 aa10.79□□□□□ -0.68
DDX55-203ENST00000421670 SMIM2Q9BVW6 85 aa10.79□□□□□ -0.68
DDX55-203ENST00000421670 MAP1LC3AQ9H492 121 aa10.79□□□□□ -0.68
DDX55-203ENST00000421670 TRBV27A0A0K0K1C4 114 aa10.78□□□□□ -0.68
DDX55-203ENST00000421670 I3L3M4 83 aa10.78□□□□□ -0.68
DDX55-203ENST00000421670 PMCHP20382 165 aa10.78□□□□□ -0.68
DDX55-203ENST00000421670 TIRAPP58753 221 aa10.78□□□□□ -0.68
DDX55-203ENST00000421670 COTL1Q14019 142 aa10.78□□□□□ -0.68
DDX55-203ENST00000421670 MRPS16Q9Y3D3 137 aaKnown RBP10.78□□□□□ -0.68
DDX55-203ENST00000421670 SACSQ9NZJ4 4579 aa10.78□□□□□ -0.68
DDX55-203ENST00000421670 TRBV6-8A0A0A6YYG3 113 aa10.77□□□□□ -0.68
DDX55-203ENST00000421670 TSHBP01222 138 aa10.77□□□□□ -0.68
DDX55-203ENST00000421670 LELP1Q5T871 98 aa10.77□□□□□ -0.68
DDX55-203ENST00000421670 LINC00476Q8WZB0 136 aa10.77□□□□□ -0.68
DDX55-203ENST00000421670 KMT2CQ8NEZ4 4911 aaKnown RBP10.77□□□□□ -0.69
DDX55-203ENST00000421670 VCYO14598 125 aa10.77□□□□□ -0.69
DDX55-203ENST00000421670 LY6G6CO95867 125 aa10.77□□□□□ -0.69
DDX55-203ENST00000421670 LGALS9CQ6DKI2 356 aa10.77□□□□□ -0.69
DDX55-203ENST00000421670 WFDC10BQ8IUB3 73 aa10.77□□□□□ -0.69
DDX55-203ENST00000421670 RPL32P62910 135 aaKnown RBP10.76□□□□□ -0.69
DDX55-203ENST00000421670 IQCJQ1A5X6 159 aa10.76□□□□□ -0.69
DDX55-203ENST00000421670 IGLV2-18A0A075B6J9 118 aa10.75□□□□□ -0.69
DDX55-203ENST00000421670 TRBV25-1A0A075B6N4 114 aa10.75□□□□□ -0.69
DDX55-203ENST00000421670 IFI27P40305 119 aaPredicted RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 156.3 ms