RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CLEC2BQ92478 149 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 CRYBG3Q68DQ2 2970 aa12.44□□□□□ -0.42
PKP4-204ENST00000421462 TRAV41A0A0B4J266 112 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 IGHV1-69DA0A0B4J2H0 117 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 U3KQE9 123 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 CENPVL3A0A0U1RRI6 287 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 TMEM141Q96I45 108 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 SHISA2Q6UWI4 295 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 BRD3OSQ6XYD6 125 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 KLK9Q9UKQ9 250 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 KIF25-AS1Q9Y6Z4 181 aa12.43□□□□□ -0.42
PKP4-204ENST00000421462 VPS13CQ709C8 3753 aa12.42□□□□□ -0.42
PKP4-204ENST00000421462 H3BMM0 161 aa12.42□□□□□ -0.42
PKP4-204ENST00000421462 UBE2WQ96B02 151 aa12.42□□□□□ -0.42
PKP4-204ENST00000421462 MDFICQ9P1T7 246 aa12.42□□□□□ -0.42
PKP4-204ENST00000421462 PF4V1P10720 104 aa12.42□□□□□ -0.42
PKP4-204ENST00000421462 ODF3Q96PU9 254 aa12.42□□□□□ -0.42
PKP4-204ENST00000421462 LENEPQ9Y5L5 61 aa12.42□□□□□ -0.42
PKP4-204ENST00000421462 DAND5Q8N907 189 aa12.41□□□□□ -0.42
PKP4-204ENST00000421462 TIMM17AQ99595 171 aa12.41□□□□□ -0.42
PKP4-204ENST00000421462 RHPN1-AS1Q9BWJ2 59 aa12.41□□□□□ -0.42
PKP4-204ENST00000421462 OOSP1A8MZH6 123 aa12.41□□□□□ -0.42
PKP4-204ENST00000421462 TMEM223A0PJW6 202 aa12.41□□□□□ -0.42
PKP4-204ENST00000421462 ZNF22P17026 224 aaPredicted RBP12.41□□□□□ -0.42
PKP4-204ENST00000421462 UBE2E1P51965 193 aa12.41□□□□□ -0.42
PKP4-204ENST00000421462 TRBV7-9A0A0J9YWB2 115 aa12.4□□□□□ -0.42
PKP4-204ENST00000421462 A0A0U1RRA0 63 aa12.4□□□□□ -0.42
PKP4-204ENST00000421462 LEPROTO15243 131 aa12.4□□□□□ -0.42
PKP4-204ENST00000421462 CHCHD5Q9BSY4 110 aa12.4□□□□□ -0.42
PKP4-204ENST00000421462 SIRPDQ9H106 197 aa12.4□□□□□ -0.42
PKP4-204ENST00000421462 A0A0J9YXY3 114 aa12.39□□□□□ -0.43
PKP4-204ENST00000421462 MEIG1Q5JSS6 88 aa12.39□□□□□ -0.43
PKP4-204ENST00000421462 FOXC1Q12948 553 aa12.39□□□□□ -0.43
PKP4-204ENST00000421462 C5orf56Q8N8D9 126 aa12.39□□□□□ -0.43
PKP4-204ENST00000421462 IGHV4OR15-8A0A075B7B6 117 aa12.38□□□□□ -0.43
PKP4-204ENST00000421462 A0A087WW49 117 aa12.38□□□□□ -0.43
PKP4-204ENST00000421462 P0DMU3 169 aa12.38□□□□□ -0.43
PKP4-204ENST00000421462 FAM231AP0DMU4 169 aa12.38□□□□□ -0.43
PKP4-204ENST00000421462 FAM231CP0DMU5 169 aa12.38□□□□□ -0.43
PKP4-204ENST00000421462 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.37□□□□□ -0.43
PKP4-204ENST00000421462 TRBV10-2A0A0K0K1G8 114 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 IGHV3-30-3P0DP02 117 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 RPL32P62910 135 aaKnown RBP12.37□□□□□ -0.43
PKP4-204ENST00000421462 ADAMTSL4-AS1Q5T5F5 129 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 IGF2-ASQ6U949 168 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 HIVEP3Q5T1R4 2406 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 M0R2P5 195 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 SOCS3O14543 225 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 TIMM21Q9BVV7 248 aa12.37□□□□□ -0.43
PKP4-204ENST00000421462 MUC6Q6W4X9 2439 aa12.36□□□□□ -0.43
PKP4-204ENST00000421462 H7C423 109 aa12.36□□□□□ -0.43
PKP4-204ENST00000421462 CD28P10747 220 aa12.36□□□□□ -0.43
PKP4-204ENST00000421462 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
PKP4-204ENST00000421462 NPFFO15130 113 aa12.36□□□□□ -0.43
PKP4-204ENST00000421462 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
PKP4-204ENST00000421462 SPINK13Q1W4C9 94 aa12.35□□□□□ -0.43
PKP4-204ENST00000421462 CSMD2Q7Z408 3487 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 KNCNA6PVL3 124 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 LGALS9O00182 355 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 BPESC1Q9GZL8 116 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 M0QY20 66 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 PROK1P58294 105 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 IGLV4-3A0A075B6K6 122 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 PRM2P04554 102 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 COX6CP09669 75 aa12.34□□□□□ -0.43
PKP4-204ENST00000421462 ZNF625Q96I27 306 aaPredicted RBP12.34□□□□□ -0.43
PKP4-204ENST00000421462 MED14OSP0DP75 135 aa12.33□□□□□ -0.44
PKP4-204ENST00000421462 C20orf203Q8NBC4 194 aa12.33□□□□□ -0.44
PKP4-204ENST00000421462 NDUFA12Q9UI09 145 aa12.33□□□□□ -0.44
PKP4-204ENST00000421462 NDUFA4O00483 81 aa12.33□□□□□ -0.44
PKP4-204ENST00000421462 A0A1W2PPR1 153 aa12.32□□□□□ -0.44
PKP4-204ENST00000421462 BLCAPP62952 87 aa12.32□□□□□ -0.44
PKP4-204ENST00000421462 DUX5Q96PT3 197 aa12.32□□□□□ -0.44
PKP4-204ENST00000421462 FAM223BA6NKX1 122 aa12.31□□□□□ -0.44
PKP4-204ENST00000421462 FAM223AQ8IWN6 122 aa12.31□□□□□ -0.44
PKP4-204ENST00000421462 Q9UF83 564 aa12.31□□□□□ -0.44
PKP4-204ENST00000421462 MOB4Q9Y3A3 225 aa12.31□□□□□ -0.44
PKP4-204ENST00000421462 RPL13AP40429 203 aaKnown RBP12.31□□□□□ -0.44
PKP4-204ENST00000421462 FAM19A4Q96LR4 140 aa12.31□□□□□ -0.44
PKP4-204ENST00000421462 TRBV30A0A0K0K1B3 111 aa12.3□□□□□ -0.44
PKP4-204ENST00000421462 NCOR2Q9Y618 2525 aa12.3□□□□□ -0.44
PKP4-204ENST00000421462 KLLNB2CW77 178 aa12.3□□□□□ -0.44
PKP4-204ENST00000421462 I3L3M4 83 aa12.3□□□□□ -0.44
PKP4-204ENST00000421462 NXPH4O95158 308 aa12.29□□□□□ -0.44
PKP4-204ENST00000421462 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
PKP4-204ENST00000421462 IGHV3-16A0A0C4DH30 117 aa12.29□□□□□ -0.44
PKP4-204ENST00000421462 TMEM95Q3KNT9 176 aa12.29□□□□□ -0.44
PKP4-204ENST00000421462 C11orf71Q6IPW1 123 aa12.29□□□□□ -0.44
PKP4-204ENST00000421462 IGHV3-38A0A0C4DH36 116 aa12.29□□□□□ -0.44
PKP4-204ENST00000421462 IGHV1-69P01742 117 aa12.29□□□□□ -0.44
PKP4-204ENST00000421462 ABCA2Q9BZC7 2435 aa12.28□□□□□ -0.44
PKP4-204ENST00000421462 POM121L12Q8N7R1 296 aa12.28□□□□□ -0.44
PKP4-204ENST00000421462 DAZ1Q9NQZ3 744 aaKnown RBP12.28□□□□□ -0.44
PKP4-204ENST00000421462 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.27□□□□□ -0.44
PKP4-204ENST00000421462 IGKV2-29A2NJV5 120 aaPredicted RBP12.27□□□□□ -0.44
PKP4-204ENST00000421462 ID1P41134 155 aa12.27□□□□□ -0.44
PKP4-204ENST00000421462 FAM236AA0A1B0GUQ0 79 aa12.27□□□□□ -0.45
PKP4-204ENST00000421462 FAM236BA0A1B0GV22 79 aa12.27□□□□□ -0.45
PKP4-204ENST00000421462 NSUN5P1Q3KNT7 163 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms