RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 UFSP1Q6NVU6 142 aa15.13■□□□□ 0.01
GPC1-202ENST00000420138 C20orf78Q9BR46 151 aa15.13■□□□□ 0.01
GPC1-202ENST00000420138 SMIM2Q9BVW6 85 aa15.13■□□□□ 0.01
GPC1-202ENST00000420138 PPP1R17O96001 155 aa15.12■□□□□ 0.01
GPC1-202ENST00000420138 SUMO2P61956 95 aaKnown RBP15.12■□□□□ 0.01
GPC1-202ENST00000420138 CSTL1Q9H114 145 aa15.12■□□□□ 0.01
GPC1-202ENST00000420138 TMEM263Q8WUH6 116 aaKnown RBP15.11■□□□□ 0.01
GPC1-202ENST00000420138 C18orf15Q96N68 181 aa15.11■□□□□ 0.01
GPC1-202ENST00000420138 MRPL16Q9NX20 251 aaKnown RBP15.11■□□□□ 0.01
GPC1-202ENST00000420138 PLAC8L1A1L4L8 177 aa15.1■□□□□ 0.01
GPC1-202ENST00000420138 M0QY20 66 aa15.1■□□□□ 0.01
GPC1-202ENST00000420138 OXLD1Q5BKU9 147 aa15.1■□□□□ 0.01
GPC1-202ENST00000420138 F5H697 171 aa15.1■□□□□ 0.01
GPC1-202ENST00000420138 TCAPO15273 167 aa15.1■□□□□ 0.01
GPC1-202ENST00000420138 A8MWV9 139 aa15.09■□□□□ 0.01
GPC1-202ENST00000420138 ZNF56Q15929 161 aa15.09■□□□□ 0.01
GPC1-202ENST00000420138 CFAP126Q5VTH2 177 aa15.09■□□□□ 0.01
GPC1-202ENST00000420138 SLC25A34Q6PIV7 304 aa15.09■□□□□ 0.01
GPC1-202ENST00000420138 K7EMI3 77 aa15.08■□□□□ 0.01
GPC1-202ENST00000420138 ATP5LO75964 103 aa15.08■□□□□ 0.01
GPC1-202ENST00000420138 BATFQ16520 125 aa15.08■□□□□ 0.01
GPC1-202ENST00000420138 TRBV6-5A0A0K0K1A5 114 aa15.07■□□□□ 0
GPC1-202ENST00000420138 ORMDL2Q53FV1 153 aa15.07■□□□□ 0
GPC1-202ENST00000420138 RS1O15537 224 aa15.06■□□□□ 0
GPC1-202ENST00000420138 PRSS1P07477 247 aa15.06■□□□□ 0
GPC1-202ENST00000420138 POLR2KP53803 58 aaKnown RBP15.06■□□□□ 0
GPC1-202ENST00000420138 RPL32P62910 135 aaKnown RBP15.06■□□□□ 0
GPC1-202ENST00000420138 EDA2RQ9HAV5 297 aa15.06■□□□□ 0
GPC1-202ENST00000420138 IGHV3-73A0A0B4J1V6 119 aa15.06■□□□□ 0
GPC1-202ENST00000420138 NUDT3O95989 172 aa15.06■□□□□ 0
GPC1-202ENST00000420138 DAZ2Q13117 558 aaKnown RBP15.06■□□□□ 0
GPC1-202ENST00000420138 C16orf74Q96GX8 76 aa15.06■□□□□ 0
GPC1-202ENST00000420138 Q6ZSN1 163 aa15.05■□□□□ -0
GPC1-202ENST00000420138 DKK2Q9UBU2 259 aa15.05■□□□□ -0
GPC1-202ENST00000420138 COX8AP10176 69 aa15.04■□□□□ -0
GPC1-202ENST00000420138 ODF1Q14990 250 aa15.04■□□□□ -0
GPC1-202ENST00000420138 RRN3P1Q2M238 152 aa15.03■□□□□ -0
GPC1-202ENST00000420138 COL5A1-AS1Q5SY13 56 aa15.03■□□□□ -0
GPC1-202ENST00000420138 Q6ZTI0 123 aa15.03■□□□□ -0
GPC1-202ENST00000420138 NEGR1Q7Z3B1 354 aa15.03■□□□□ -0
GPC1-202ENST00000420138 PKD1L1Q8TDX9 2849 aa15.03■□□□□ -0
GPC1-202ENST00000420138 TRGV1A0A0A0MS02 117 aa15.03■□□□□ -0
GPC1-202ENST00000420138 KRTAP10-11P60412 298 aa15.03■□□□□ -0
GPC1-202ENST00000420138 ZMAT4Q9H898 229 aa15.03■□□□□ -0
GPC1-202ENST00000420138 NOP10Q9NPE3 64 aaKnown RBP15.03■□□□□ -0
GPC1-202ENST00000420138 ANKRD39Q53RE8 183 aa15.02■□□□□ -0
GPC1-202ENST00000420138 KIR2DL5BQ8NHK3 375 aa15.02■□□□□ -0
GPC1-202ENST00000420138 OVOL2Q9BRP0 275 aa15.02■□□□□ -0
GPC1-202ENST00000420138 CMYA5Q8N3K9 4069 aa15.02□□□□□ -0.01
GPC1-202ENST00000420138 SDHAF1A6NFY7 115 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 TP73-AS1Q9UF72 201 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 X6R8D5 127 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 ANK2Q01484 3957 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 RHODO00212 210 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 P0DMU3 169 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 FAM231AP0DMU4 169 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 FAM231CP0DMU5 169 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 HINT1P49773 126 aaPredicted RBP15.01□□□□□ -0.01
GPC1-202ENST00000420138 EGFEM1PQ0D2K5 195 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 STPG4Q8N801 248 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 TOMM6Q96B49 74 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 Q9UF83 564 aa15.01□□□□□ -0.01
GPC1-202ENST00000420138 TRBV27A0A0K0K1C4 114 aa15□□□□□ -0.01
GPC1-202ENST00000420138 RIPPLY3P57055 190 aa15□□□□□ -0.01
GPC1-202ENST00000420138 ZFP2Q6ZN57 461 aa15□□□□□ -0.01
GPC1-202ENST00000420138 ZMAT5Q9UDW3 170 aaKnown RBP15□□□□□ -0.01
GPC1-202ENST00000420138 G3V4G9 280 aa14.99□□□□□ -0.01
GPC1-202ENST00000420138 NACAE9PAV3 2078 aa14.99□□□□□ -0.01
GPC1-202ENST00000420138 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.99□□□□□ -0.01
GPC1-202ENST00000420138 VCYO14598 125 aa14.99□□□□□ -0.01
GPC1-202ENST00000420138 IGHV3-53P01767 116 aa14.99□□□□□ -0.01
GPC1-202ENST00000420138 IGHV4-30-4P0DP06 118 aa14.99□□□□□ -0.01
GPC1-202ENST00000420138 H7C1H1 209 aa14.98□□□□□ -0.01
GPC1-202ENST00000420138 IGKCP01834 107 aa14.98□□□□□ -0.01
GPC1-202ENST00000420138 ZNF479Q96JC4 524 aa14.98□□□□□ -0.01
GPC1-202ENST00000420138 DPM2O94777 84 aa14.97□□□□□ -0.01
GPC1-202ENST00000420138 APOC4P55056 127 aa14.97□□□□□ -0.01
GPC1-202ENST00000420138 OR4C5Q8NGB2 326 aa14.97□□□□□ -0.01
GPC1-202ENST00000420138 SCGB3A1Q96QR1 104 aa14.97□□□□□ -0.01
GPC1-202ENST00000420138 A0A087WX48 190 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 FGF6P10767 208 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 G0S2P27469 103 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 DEFB104AQ8WTQ1 72 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 TRAV4A0A0B4J268 109 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 SAMD5Q5TGI4 173 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 C2orf66Q6UXQ4 117 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 HHLA3Q9XRX5 114 aa14.96□□□□□ -0.01
GPC1-202ENST00000420138 TRAV12-1A0A0B4J245 112 aa14.95□□□□□ -0.02
GPC1-202ENST00000420138 BOD1L2Q8IYS8 172 aa14.95□□□□□ -0.02
GPC1-202ENST00000420138 DEFB135Q30KP9 77 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 GAGE12BA1L429 117 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 SMIM9A6NGZ8 99 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 DLEU1O43261 78 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 GAGE7O76087 117 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 GAGE12FP0CL80 117 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 GAGE12GP0CL81 117 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 GAGE12IP0CL82 117 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 MPV17L2Q567V2 206 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 C2orf91Q6ZV80 131 aa14.94□□□□□ -0.02
GPC1-202ENST00000420138 LINC00469Q8N7U9 141 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 390.1 ms